RNA–Protein interactions for RNA: ENST00000534885.5

TNFRSF1A-205, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best)

Gene TNFRSF1A, Length 2,069 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-205ENST00000534885 ZNF777Q9ULD5 760 aaPredicted RBP30.45■■■□□ 2.47
TNFRSF1A-205ENST00000534885 NPM1P06748 294 aaKnown RBP eCLIP30.44■■■□□ 2.46
TNFRSF1A-205ENST00000534885 CCER1Q8TC90 406 aaPredicted RBP30.42■■■□□ 2.46
TNFRSF1A-205ENST00000534885 MYO5CQ9NQX4 1742 aa30.42■■■□□ 2.46
TNFRSF1A-205ENST00000534885 DNMT1P26358 1616 aaKnown RBP30.41■■■□□ 2.46
TNFRSF1A-205ENST00000534885 DAPK1P53355 1430 aa30.38■■■□□ 2.45
TNFRSF1A-205ENST00000534885 SETD5Q9C0A6 1442 aa30.38■■■□□ 2.45
TNFRSF1A-205ENST00000534885 RAB3GAP2Q9H2M9 1393 aa30.37■■■□□ 2.45
TNFRSF1A-205ENST00000534885 ABCC5O15440 1437 aa30.36■■■□□ 2.45
TNFRSF1A-205ENST00000534885 ARHGAP5Q13017 1502 aa30.35■■■□□ 2.45
TNFRSF1A-205ENST00000534885 SAMD9LQ8IVG5 1584 aa30.34■■■□□ 2.45
TNFRSF1A-205ENST00000534885 CHIC2Q9UKJ5 165 aa30.34■■■□□ 2.45
TNFRSF1A-205ENST00000534885 HFM1A2PYH4 1435 aa30.31■■■□□ 2.44
TNFRSF1A-205ENST00000534885 PLCH2O75038 1416 aa30.31■■■□□ 2.44
TNFRSF1A-205ENST00000534885 ABCA9Q8IUA7 1624 aa30.31■■■□□ 2.44
TNFRSF1A-205ENST00000534885 NAIPQ13075 1403 aa30.28■■■□□ 2.44
TNFRSF1A-205ENST00000534885 CROCC2H7BZ55 1655 aa30.28■■■□□ 2.44
TNFRSF1A-205ENST00000534885 RRP7BPQ9NSQ0 103 aa30.25■■■□□ 2.43
TNFRSF1A-205ENST00000534885 MAPKBP1O60336 1514 aa30.23■■■□□ 2.43
TNFRSF1A-205ENST00000534885 AKNAQ7Z591 1439 aa30.23■■■□□ 2.43
TNFRSF1A-205ENST00000534885 HNRNPMP52272 730 aaKnown RBP eCLIP30.23■■■□□ 2.43
TNFRSF1A-205ENST00000534885 MBD5Q9P267 1494 aa30.23■■■□□ 2.43
TNFRSF1A-205ENST00000534885 GCC2Q8IWJ2 1684 aa30.22■■■□□ 2.43
TNFRSF1A-205ENST00000534885 DHX57Q6P158 1386 aaKnown RBP30.21■■■□□ 2.43
TNFRSF1A-205ENST00000534885 ARHGEF5Q12774 1597 aa30.21■■■□□ 2.43
TNFRSF1A-205ENST00000534885 SYCP2Q9BX26 1530 aa30.21■■■□□ 2.43
TNFRSF1A-205ENST00000534885 ARAP3Q8WWN8 1544 aa30.21■■■□□ 2.43
TNFRSF1A-205ENST00000534885 ROCK1Q13464 1354 aa30.2■■■□□ 2.42
TNFRSF1A-205ENST00000534885 EFCAB2Q5VUJ9 269 aa30.19■■■□□ 2.42
TNFRSF1A-205ENST00000534885 ZEB1P37275 1124 aaPredicted RBP30.18■■■□□ 2.42
TNFRSF1A-205ENST00000534885 ADGBQ8N7X0 1667 aa30.17■■■□□ 2.42
TNFRSF1A-205ENST00000534885 CCDC141Q6ZP82 1450 aa30.15■■■□□ 2.42
TNFRSF1A-205ENST00000534885 PLEKHH2Q8IVE3 1493 aa30.15■■■□□ 2.42
TNFRSF1A-205ENST00000534885 SHANK2Q9UPX8 1470 aa30.15■■■□□ 2.42
TNFRSF1A-205ENST00000534885 KIAA1107Q9UPP5 1409 aa30.14■■■□□ 2.42
TNFRSF1A-205ENST00000534885 ARHGEF12Q9NZN5 1544 aa30.14■■■□□ 2.41
TNFRSF1A-205ENST00000534885 ADGRL2O95490 1459 aa30.13■■■□□ 2.41
TNFRSF1A-205ENST00000534885 ABCC1P33527 1531 aa30.13■■■□□ 2.41
TNFRSF1A-205ENST00000534885 C9orf84Q5VXU9 1444 aa30.13■■■□□ 2.41
TNFRSF1A-205ENST00000534885 KDM6BO15054 1643 aa30.13■■■□□ 2.41
TNFRSF1A-205ENST00000534885 FANCAO15360 1455 aa30.12■■■□□ 2.41
TNFRSF1A-205ENST00000534885 NCOA1Q15788 1441 aa30.12■■■□□ 2.41
TNFRSF1A-205ENST00000534885 TSPY4P0CV99 314 aa30.08■■■□□ 2.41
TNFRSF1A-205ENST00000534885 TSPY10P0CW01 314 aa30.08■■■□□ 2.41
TNFRSF1A-205ENST00000534885 RSPH4AQ5TD94 716 aa30.08■■■□□ 2.41
TNFRSF1A-205ENST00000534885 CD109Q6YHK3 1445 aa30.08■■■□□ 2.41
TNFRSF1A-205ENST00000534885 ANKRD30AQ9BXX3 1397 aa30.06■■■□□ 2.4
TNFRSF1A-205ENST00000534885 TRAPPC8Q9Y2L5 1435 aa30.02■■■□□ 2.4
TNFRSF1A-205ENST00000534885 MAST1Q9Y2H9 1570 aa30.01■■■□□ 2.39
TNFRSF1A-205ENST00000534885 DIP2BQ9P265 1576 aa29.98■■■□□ 2.39
TNFRSF1A-205ENST00000534885 CLSPNQ9HAW4 1339 aa29.98■■■□□ 2.39
TNFRSF1A-205ENST00000534885 ADGRL1O94910 1474 aa29.98■■■□□ 2.39
TNFRSF1A-205ENST00000534885 MAP3K4Q9Y6R4 1608 aa29.98■■■□□ 2.39
TNFRSF1A-205ENST00000534885 GLI2P10070 1586 aa29.98■■■□□ 2.39
TNFRSF1A-205ENST00000534885 KIF15Q9NS87 1388 aa29.95■■■□□ 2.38
TNFRSF1A-205ENST00000534885 CFAP74Q9C0B2 1584 aa29.94■■■□□ 2.38
TNFRSF1A-205ENST00000534885 SCAPERQ9BY12 1400 aa29.94■■■□□ 2.38
TNFRSF1A-205ENST00000534885 ANKRD50Q9ULJ7 1429 aa29.92■■■□□ 2.38
TNFRSF1A-205ENST00000534885 AFAP1Q8N556 730 aa29.92■■■□□ 2.38
TNFRSF1A-205ENST00000534885 FAM69CQ0P6D2 419 aa29.91■■■□□ 2.38
TNFRSF1A-205ENST00000534885 TRIM52Q96A61 297 aa29.91■■■□□ 2.38
TNFRSF1A-205ENST00000534885 PLXNC1O60486 1568 aa29.9■■■□□ 2.38
TNFRSF1A-205ENST00000534885 ZFYVE16Q7Z3T8 1539 aa29.85■■■□□ 2.37
TNFRSF1A-205ENST00000534885 NEO1Q92859 1461 aa29.85■■■□□ 2.37
TNFRSF1A-205ENST00000534885 SPAG9O60271 1321 aaKnown RBP29.85■■■□□ 2.37
TNFRSF1A-205ENST00000534885 RTEL1-TNFRSF6BF6WH68 1400 aa29.82■■■□□ 2.36
TNFRSF1A-205ENST00000534885 DENND4BO75064 1496 aaPredicted RBP29.82■■■□□ 2.36
TNFRSF1A-205ENST00000534885 INO80Q9ULG1 1556 aaPredicted RBP29.82■■■□□ 2.36
TNFRSF1A-205ENST00000534885 KIF13AQ9H1H9 1805 aa29.81■■■□□ 2.36
TNFRSF1A-205ENST00000534885 TSPOAP1O95153 1857 aa29.8■■■□□ 2.36
TNFRSF1A-205ENST00000534885 ACIN1Q9UKV3 1341 aaKnown RBP29.8■■■□□ 2.36
TNFRSF1A-205ENST00000534885 ZNF518AQ6AHZ1 1483 aa29.8■■■□□ 2.36
TNFRSF1A-205ENST00000534885 ATP7AQ04656 1500 aa29.79■■■□□ 2.36
TNFRSF1A-205ENST00000534885 POGZQ7Z3K3 1410 aa29.78■■■□□ 2.36
TNFRSF1A-205ENST00000534885 MPHOSPH9Q99550 1183 aa29.78■■■□□ 2.36
TNFRSF1A-205ENST00000534885 DUOX2Q9NRD8 1548 aa29.78■■■□□ 2.36
TNFRSF1A-205ENST00000534885 PPRC1Q5VV67 1664 aaKnown RBP29.77■■■□□ 2.36
TNFRSF1A-205ENST00000534885 PZPP20742 1482 aa29.74■■■□□ 2.35
TNFRSF1A-205ENST00000534885 KDM5CP41229 1560 aa29.74■■■□□ 2.35
TNFRSF1A-205ENST00000534885 KIDINS220Q9ULH0 1771 aa29.73■■■□□ 2.35
TNFRSF1A-205ENST00000534885 SIN3AQ96ST3 1273 aa29.72■■■□□ 2.35
TNFRSF1A-205ENST00000534885 ERBINQ96RT1 1412 aa29.7■■■□□ 2.35
TNFRSF1A-205ENST00000534885 SLC4A1APQ9BWU0 796 aaKnown RBP29.7■■■□□ 2.34
TNFRSF1A-205ENST00000534885 MYT1LQ9UL68 1186 aa29.7■■■□□ 2.34
TNFRSF1A-205ENST00000534885 DNAJC5Q9H3Z4 198 aa29.69■■■□□ 2.34
TNFRSF1A-205ENST00000534885 RAPGEF3O95398 923 aa29.68■■■□□ 2.34
TNFRSF1A-205ENST00000534885 NUP155O75694 1391 aa29.68■■■□□ 2.34
TNFRSF1A-205ENST00000534885 KDM5DQ9BY66 1539 aa29.67■■■□□ 2.34
TNFRSF1A-205ENST00000534885 RICTORQ6R327 1708 aa29.67■■■□□ 2.34
TNFRSF1A-205ENST00000534885 FOXD1Q16676 465 aa29.66■■■□□ 2.34
TNFRSF1A-205ENST00000534885 HECW2Q9P2P5 1572 aa29.66■■■□□ 2.34
TNFRSF1A-205ENST00000534885 TEX14Q8IWB6 1497 aa29.65■■■□□ 2.34
TNFRSF1A-205ENST00000534885 UNC13BO14795 1591 aa29.65■■■□□ 2.34
TNFRSF1A-205ENST00000534885 NEUROD1Q13562 356 aa29.65■■■□□ 2.34
TNFRSF1A-205ENST00000534885 MLH3Q9UHC1 1453 aa29.64■■■□□ 2.34
TNFRSF1A-205ENST00000534885 FRMPD1Q5SYB0 1578 aa29.6■■■□□ 2.33
TNFRSF1A-205ENST00000534885 FAM135AQ9P2D6 1515 aa29.58■■■□□ 2.33
TNFRSF1A-205ENST00000534885 MAGI2Q86UL8 1455 aa29.57■■■□□ 2.32
TNFRSF1A-205ENST00000534885 DHX29Q7Z478 1369 aaKnown RBP29.57■■■□□ 2.32
TNFRSF1A-205ENST00000534885 ABCA6Q8N139 1617 aa29.56■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms