RNA–Protein interactions for RNA: ENST00000534753.5

CCDC90B-219, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-219ENST00000534753 EFCAB5A4FU69 1503 aa14.55□□□□□ -0.08
CCDC90B-219ENST00000534753 MAP3K4Q9Y6R4 1608 aa14.52□□□□□ -0.08
CCDC90B-219ENST00000534753 PPRC1Q5VV67 1664 aaKnown RBP14.52□□□□□ -0.09
CCDC90B-219ENST00000534753 CD109Q6YHK3 1445 aa14.51□□□□□ -0.09
CCDC90B-219ENST00000534753 NUP153P49790 1475 aaKnown RBP14.5□□□□□ -0.09
CCDC90B-219ENST00000534753 TEX14Q8IWB6 1497 aa14.49□□□□□ -0.09
CCDC90B-219ENST00000534753 ARHGAP35Q9NRY4 1499 aa14.49□□□□□ -0.09
CCDC90B-219ENST00000534753 PLEKHD1A6NEE1 506 aa14.48□□□□□ -0.09
CCDC90B-219ENST00000534753 CFAP43Q8NDM7 1665 aa14.46□□□□□ -0.1
CCDC90B-219ENST00000534753 FMN1Q68DA7 1419 aa14.45□□□□□ -0.1
CCDC90B-219ENST00000534753 PROM2Q8N271 834 aa14.44□□□□□ -0.1
CCDC90B-219ENST00000534753 CDK13Q14004 1512 aaKnown RBP14.44□□□□□ -0.1
CCDC90B-219ENST00000534753 COL17A1Q9UMD9 1497 aaPredicted RBP14.43□□□□□ -0.1
CCDC90B-219ENST00000534753 MAGI3Q5TCQ9 1506 aa14.41□□□□□ -0.1
CCDC90B-219ENST00000534753 DSG3P32926 999 aa14.41□□□□□ -0.1
CCDC90B-219ENST00000534753 HECW1Q76N89 1606 aa14.41□□□□□ -0.1
CCDC90B-219ENST00000534753 CLIP1P30622 1438 aa14.4□□□□□ -0.1
CCDC90B-219ENST00000534753 ABCA9Q8IUA7 1624 aa14.39□□□□□ -0.11
CCDC90B-219ENST00000534753 CDK11AQ9UQ88 783 aaPredicted RBP14.37□□□□□ -0.11
CCDC90B-219ENST00000534753 ZBTB12Q9Y330 459 aaPredicted RBP14.37□□□□□ -0.11
CCDC90B-219ENST00000534753 LOC105371045A0A1W2PR82 267 aa14.36□□□□□ -0.11
CCDC90B-219ENST00000534753 FBXO3Q9UK99 471 aa14.35□□□□□ -0.11
CCDC90B-219ENST00000534753 RAPGEF3O95398 923 aa14.34□□□□□ -0.11
CCDC90B-219ENST00000534753 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.34□□□□□ -0.11
CCDC90B-219ENST00000534753 PCF11O94913 1555 aaKnown RBP14.34□□□□□ -0.11
CCDC90B-219ENST00000534753 TTC37Q6PGP7 1564 aa14.32□□□□□ -0.12
CCDC90B-219ENST00000534753 KDM4FA0A1W2PPD8 638 aa14.32□□□□□ -0.12
CCDC90B-219ENST00000534753 CASKIN1Q8WXD9 1431 aa14.32□□□□□ -0.12
CCDC90B-219ENST00000534753 LRRIQ1Q96JM4 1722 aa14.31□□□□□ -0.12
CCDC90B-219ENST00000534753 NEO1Q92859 1461 aa14.3□□□□□ -0.12
CCDC90B-219ENST00000534753 ARAP3Q8WWN8 1544 aa14.3□□□□□ -0.12
CCDC90B-219ENST00000534753 PHLDB1Q86UU1 1377 aa14.29□□□□□ -0.12
CCDC90B-219ENST00000534753 CEP162Q5TB80 1403 aa14.29□□□□□ -0.12
CCDC90B-219ENST00000534753 FANCAO15360 1455 aa14.29□□□□□ -0.12
CCDC90B-219ENST00000534753 KIF14Q15058 1648 aa14.28□□□□□ -0.12
CCDC90B-219ENST00000534753 AKNAQ7Z591 1439 aa14.28□□□□□ -0.12
CCDC90B-219ENST00000534753 TROQ12816 1431 aaPredicted RBP14.27□□□□□ -0.12
CCDC90B-219ENST00000534753 VASPP50552 380 aaPredicted RBP14.27□□□□□ -0.13
CCDC90B-219ENST00000534753 ADGRL1O94910 1474 aa14.26□□□□□ -0.13
CCDC90B-219ENST00000534753 CCDC18Q5T9S5 1454 aa14.26□□□□□ -0.13
CCDC90B-219ENST00000534753 FYCO1Q9BQS8 1478 aa14.26□□□□□ -0.13
CCDC90B-219ENST00000534753 CFAP74Q9C0B2 1584 aa14.25□□□□□ -0.13
CCDC90B-219ENST00000534753 DENND4BO75064 1496 aaPredicted RBP14.25□□□□□ -0.13
CCDC90B-219ENST00000534753 PLCH2O75038 1416 aa14.24□□□□□ -0.13
CCDC90B-219ENST00000534753 ARID4BQ4LE39 1312 aaPredicted RBP14.24□□□□□ -0.13
CCDC90B-219ENST00000534753 EFCAB2Q5VUJ9 269 aa14.24□□□□□ -0.13
CCDC90B-219ENST00000534753 MYO5CQ9NQX4 1742 aa14.24□□□□□ -0.13
CCDC90B-219ENST00000534753 MYT1LQ9UL68 1186 aa14.23□□□□□ -0.13
CCDC90B-219ENST00000534753 ARHGAP5Q13017 1502 aa14.23□□□□□ -0.13
CCDC90B-219ENST00000534753 SCAPERQ9BY12 1400 aa14.22□□□□□ -0.13
CCDC90B-219ENST00000534753 ZNF777Q9ULD5 760 aaPredicted RBP14.21□□□□□ -0.13
CCDC90B-219ENST00000534753 FRMPD1Q5SYB0 1578 aa14.21□□□□□ -0.14
CCDC90B-219ENST00000534753 MTUS2Q5JR59 1369 aa14.19□□□□□ -0.14
CCDC90B-219ENST00000534753 SLC24A1O60721 1099 aa14.18□□□□□ -0.14
CCDC90B-219ENST00000534753 RICTORQ6R327 1708 aa14.18□□□□□ -0.14
CCDC90B-219ENST00000534753 ZNF692Q9BU19 519 aaPredicted RBP14.17□□□□□ -0.14
CCDC90B-219ENST00000534753 IFNLR1Q8IU57 520 aaPredicted RBP14.16□□□□□ -0.14
CCDC90B-219ENST00000534753 AFAP1Q8N556 730 aa14.15□□□□□ -0.14
CCDC90B-219ENST00000534753 POGZQ7Z3K3 1410 aa14.15□□□□□ -0.14
CCDC90B-219ENST00000534753 MLECQ14165 292 aa14.14□□□□□ -0.15
CCDC90B-219ENST00000534753 CDC42BPBQ9Y5S2 1711 aa14.14□□□□□ -0.15
CCDC90B-219ENST00000534753 YEATS2Q9ULM3 1422 aa14.14□□□□□ -0.15
CCDC90B-219ENST00000534753 CCNB3Q8WWL7 1395 aa14.13□□□□□ -0.15
CCDC90B-219ENST00000534753 PREX2Q70Z35 1606 aa14.13□□□□□ -0.15
CCDC90B-219ENST00000534753 ZFYVE16Q7Z3T8 1539 aa14.13□□□□□ -0.15
CCDC90B-219ENST00000534753 ARHGEF40Q8TER5 1519 aa14.12□□□□□ -0.15
CCDC90B-219ENST00000534753 CDC42BPAQ5VT25 1732 aa14.11□□□□□ -0.15
CCDC90B-219ENST00000534753 CFDP1Q9UEE9 299 aaPredicted RBP14.11□□□□□ -0.15
CCDC90B-219ENST00000534753 HNRNPMP52272 730 aaKnown RBP eCLIP14.1□□□□□ -0.15
CCDC90B-219ENST00000534753 ZMYM4Q5VZL5 1548 aa14.1□□□□□ -0.15
CCDC90B-219ENST00000534753 VPS8Q8N3P4 1428 aa14.09□□□□□ -0.15
CCDC90B-219ENST00000534753 SSUH2Q9Y2M2 353 aa14.09□□□□□ -0.15
CCDC90B-219ENST00000534753 ZNF518AQ6AHZ1 1483 aa14.09□□□□□ -0.15
CCDC90B-219ENST00000534753 GPATCH8Q9UKJ3 1502 aaKnown RBP14.09□□□□□ -0.15
CCDC90B-219ENST00000534753 MAGI2Q86UL8 1455 aa14.08□□□□□ -0.16
CCDC90B-219ENST00000534753 SPDYE2BA6NHP3 402 aa14.08□□□□□ -0.16
CCDC90B-219ENST00000534753 SPDYE6P0CI01 402 aa14.08□□□□□ -0.16
CCDC90B-219ENST00000534753 SPDYE2Q495Y8 402 aa14.08□□□□□ -0.16
CCDC90B-219ENST00000534753 EHBP1L1Q8N3D4 1523 aa14.08□□□□□ -0.16
CCDC90B-219ENST00000534753 TRAPPC8Q9Y2L5 1435 aa14.07□□□□□ -0.16
CCDC90B-219ENST00000534753 ARHGEF12Q9NZN5 1544 aa14.07□□□□□ -0.16
CCDC90B-219ENST00000534753 ABCC1P33527 1531 aa14.06□□□□□ -0.16
CCDC90B-219ENST00000534753 BCORL1Q5H9F3 1711 aa14.06□□□□□ -0.16
CCDC90B-219ENST00000534753 ATP10AO60312 1499 aa14.06□□□□□ -0.16
CCDC90B-219ENST00000534753 ITSN2Q9NZM3 1697 aa14.05□□□□□ -0.16
CCDC90B-219ENST00000534753 ZNF644Q9H582 1327 aaPredicted RBP14.05□□□□□ -0.16
CCDC90B-219ENST00000534753 SYCP2Q9BX26 1530 aa14.05□□□□□ -0.16
CCDC90B-219ENST00000534753 TIAM1Q13009 1591 aa14.05□□□□□ -0.16
CCDC90B-219ENST00000534753 SAMD9LQ8IVG5 1584 aa14.05□□□□□ -0.16
CCDC90B-219ENST00000534753 MADDQ8WXG6 1647 aa14.04□□□□□ -0.16
CCDC90B-219ENST00000534753 HECW2Q9P2P5 1572 aa14.04□□□□□ -0.16
CCDC90B-219ENST00000534753 ADAMTSL3P82987 1691 aa14.04□□□□□ -0.16
CCDC90B-219ENST00000534753 SIGLEC1Q9BZZ2 1709 aa14.04□□□□□ -0.16
CCDC90B-219ENST00000534753 C9orf84Q5VXU9 1444 aa14.03□□□□□ -0.16
CCDC90B-219ENST00000534753 SUPT6HQ7KZ85 1726 aaKnown RBP14.02□□□□□ -0.16
CCDC90B-219ENST00000534753 RIMS1Q86UR5 1692 aaKnown RBP14.02□□□□□ -0.16
CCDC90B-219ENST00000534753 KDM5CP41229 1560 aa14.02□□□□□ -0.16
CCDC90B-219ENST00000534753 PTPRMP28827 1452 aa14.02□□□□□ -0.16
CCDC90B-219ENST00000534753 NCOA2Q15596 1464 aa14.02□□□□□ -0.16
CCDC90B-219ENST00000534753 SPAG9O60271 1321 aaKnown RBP14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 6.5 ms