RNA–Protein interactions for RNA: ENST00000534610.5

ATG13-222, Transcript of autophagy related 13, humanhuman

TSL 5

Gene ATG13, Length 1,655 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG13-222ENST00000534610 PTPN23Q9H3S7 1636 aa22.87■■□□□ 1.25
ATG13-222ENST00000534610 TCOF1Q13428 1488 aaKnown RBP22.85■■□□□ 1.25
ATG13-222ENST00000534610 KIF14Q15058 1648 aa22.84■■□□□ 1.25
ATG13-222ENST00000534610 KCNH8Q96L42 1107 aa22.83■■□□□ 1.24
ATG13-222ENST00000534610 CFDP1Q9UEE9 299 aaPredicted RBP22.83■■□□□ 1.24
ATG13-222ENST00000534610 SETD5Q9C0A6 1442 aa22.8■■□□□ 1.24
ATG13-222ENST00000534610 TEX14Q8IWB6 1497 aa22.8■■□□□ 1.24
ATG13-222ENST00000534610 CD109Q6YHK3 1445 aa22.8■■□□□ 1.24
ATG13-222ENST00000534610 ABCA9Q8IUA7 1624 aa22.79■■□□□ 1.24
ATG13-222ENST00000534610 ITSN2Q9NZM3 1697 aa22.78■■□□□ 1.24
ATG13-222ENST00000534610 GPATCH8Q9UKJ3 1502 aaKnown RBP22.78■■□□□ 1.24
ATG13-222ENST00000534610 RAB3GAP2Q9H2M9 1393 aa22.73■■□□□ 1.23
ATG13-222ENST00000534610 ZNF777Q9ULD5 760 aaPredicted RBP22.72■■□□□ 1.23
ATG13-222ENST00000534610 PTPRKQ15262 1439 aa22.69■■□□□ 1.22
ATG13-222ENST00000534610 ZNF644Q9H582 1327 aaPredicted RBP22.68■■□□□ 1.22
ATG13-222ENST00000534610 CLSPNQ9HAW4 1339 aa22.68■■□□□ 1.22
ATG13-222ENST00000534610 KDM4FA0A1W2PPD8 638 aa22.67■■□□□ 1.22
ATG13-222ENST00000534610 CAMSAP2Q08AD1 1489 aa22.67■■□□□ 1.22
ATG13-222ENST00000534610 HFM1A2PYH4 1435 aa22.67■■□□□ 1.22
ATG13-222ENST00000534610 CHIC2Q9UKJ5 165 aa22.66■■□□□ 1.22
ATG13-222ENST00000534610 AEBP2Q6ZN18 517 aaPredicted RBP22.65■■□□□ 1.22
ATG13-222ENST00000534610 DAPK1P53355 1430 aa22.65■■□□□ 1.22
ATG13-222ENST00000534610 DHX57Q6P158 1386 aaKnown RBP22.65■■□□□ 1.22
ATG13-222ENST00000534610 TTC37Q6PGP7 1564 aa22.65■■□□□ 1.22
ATG13-222ENST00000534610 CDC42BPAQ5VT25 1732 aa22.64■■□□□ 1.21
ATG13-222ENST00000534610 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.63■■□□□ 1.21
ATG13-222ENST00000534610 ARAP3Q8WWN8 1544 aa22.62■■□□□ 1.21
ATG13-222ENST00000534610 ACIN1Q9UKV3 1341 aaKnown RBP22.62■■□□□ 1.21
ATG13-222ENST00000534610 ABCC5O15440 1437 aa22.62■■□□□ 1.21
ATG13-222ENST00000534610 AKNAQ7Z591 1439 aa22.62■■□□□ 1.21
ATG13-222ENST00000534610 DNMT1P26358 1616 aaKnown RBP22.62■■□□□ 1.21
ATG13-222ENST00000534610 ROCK1Q13464 1354 aa22.6■■□□□ 1.21
ATG13-222ENST00000534610 RRP7BPQ9NSQ0 103 aa22.6■■□□□ 1.21
ATG13-222ENST00000534610 NAIPQ13075 1403 aa22.6■■□□□ 1.21
ATG13-222ENST00000534610 FRMPD1Q5SYB0 1578 aa22.6■■□□□ 1.21
ATG13-222ENST00000534610 RSPH4AQ5TD94 716 aa22.59■■□□□ 1.21
ATG13-222ENST00000534610 PREX2Q70Z35 1606 aa22.58■■□□□ 1.2
ATG13-222ENST00000534610 TSPY4P0CV99 314 aa22.57■■□□□ 1.2
ATG13-222ENST00000534610 TSPY10P0CW01 314 aa22.57■■□□□ 1.2
ATG13-222ENST00000534610 ARHGAP5Q13017 1502 aa22.56■■□□□ 1.2
ATG13-222ENST00000534610 ADGRL1O94910 1474 aa22.56■■□□□ 1.2
ATG13-222ENST00000534610 EFCAB2Q5VUJ9 269 aa22.55■■□□□ 1.2
ATG13-222ENST00000534610 NEO1Q92859 1461 aa22.55■■□□□ 1.2
ATG13-222ENST00000534610 PLCH2O75038 1416 aa22.54■■□□□ 1.2
ATG13-222ENST00000534610 MYO5CQ9NQX4 1742 aa22.53■■□□□ 1.2
ATG13-222ENST00000534610 PLEKHH2Q8IVE3 1493 aa22.53■■□□□ 1.2
ATG13-222ENST00000534610 CDC42BPBQ9Y5S2 1711 aa22.52■■□□□ 1.2
ATG13-222ENST00000534610 HNRNPMP52272 730 aaKnown RBP eCLIP22.52■■□□□ 1.2
ATG13-222ENST00000534610 ANKRD30AQ9BXX3 1397 aa22.51■■□□□ 1.19
ATG13-222ENST00000534610 RICTORQ6R327 1708 aa22.5■■□□□ 1.19
ATG13-222ENST00000534610 GCC2Q8IWJ2 1684 aa22.49■■□□□ 1.19
ATG13-222ENST00000534610 RAPGEF3O95398 923 aa22.49■■□□□ 1.19
ATG13-222ENST00000534610 ARHGEF5Q12774 1597 aa22.49■■□□□ 1.19
ATG13-222ENST00000534610 SHANK2Q9UPX8 1470 aa22.48■■□□□ 1.19
ATG13-222ENST00000534610 KIAA1107Q9UPP5 1409 aa22.48■■□□□ 1.19
ATG13-222ENST00000534610 SAMD9LQ8IVG5 1584 aa22.47■■□□□ 1.19
ATG13-222ENST00000534610 FANCAO15360 1455 aa22.47■■□□□ 1.19
ATG13-222ENST00000534610 ADGRL2O95490 1459 aa22.46■■□□□ 1.19
ATG13-222ENST00000534610 NCOA1Q15788 1441 aa22.46■■□□□ 1.19
ATG13-222ENST00000534610 CCDC141Q6ZP82 1450 aa22.46■■□□□ 1.19
ATG13-222ENST00000534610 TRIM52Q96A61 297 aa22.46■■□□□ 1.19
ATG13-222ENST00000534610 CROCC2H7BZ55 1655 aa22.45■■□□□ 1.18
ATG13-222ENST00000534610 MBD5Q9P267 1494 aa22.45■■□□□ 1.18
ATG13-222ENST00000534610 CFAP74Q9C0B2 1584 aa22.45■■□□□ 1.18
ATG13-222ENST00000534610 C9orf84Q5VXU9 1444 aa22.44■■□□□ 1.18
ATG13-222ENST00000534610 ADGBQ8N7X0 1667 aa22.44■■□□□ 1.18
ATG13-222ENST00000534610 SYCP2Q9BX26 1530 aa22.4■■□□□ 1.18
ATG13-222ENST00000534610 SIGLEC1Q9BZZ2 1709 aa22.39■■□□□ 1.18
ATG13-222ENST00000534610 DENND4BO75064 1496 aaPredicted RBP22.38■■□□□ 1.17
ATG13-222ENST00000534610 ARHGEF40Q8TER5 1519 aa22.37■■□□□ 1.17
ATG13-222ENST00000534610 ZMYM4Q5VZL5 1548 aa22.36■■□□□ 1.17
ATG13-222ENST00000534610 ANKRD50Q9ULJ7 1429 aa22.34■■□□□ 1.17
ATG13-222ENST00000534610 KIF15Q9NS87 1388 aa22.33■■□□□ 1.16
ATG13-222ENST00000534610 ABCC1P33527 1531 aa22.33■■□□□ 1.16
ATG13-222ENST00000534610 ADAMTSL3P82987 1691 aa22.32■■□□□ 1.16
ATG13-222ENST00000534610 MAST1Q9Y2H9 1570 aa22.32■■□□□ 1.16
ATG13-222ENST00000534610 YEATS2Q9ULM3 1422 aa22.31■■□□□ 1.16
ATG13-222ENST00000534610 MPHOSPH9Q99550 1183 aa22.31■■□□□ 1.16
ATG13-222ENST00000534610 TIMELESSQ9UNS1 1208 aa22.31■■□□□ 1.16
ATG13-222ENST00000534610 POGZQ7Z3K3 1410 aa22.31■■□□□ 1.16
ATG13-222ENST00000534610 SCAPERQ9BY12 1400 aa22.31■■□□□ 1.16
ATG13-222ENST00000534610 BCORL1Q5H9F3 1711 aa22.3■■□□□ 1.16
ATG13-222ENST00000534610 ARHGEF12Q9NZN5 1544 aa22.3■■□□□ 1.16
ATG13-222ENST00000534610 NEUROD1Q13562 356 aa22.28■■□□□ 1.16
ATG13-222ENST00000534610 SPAG9O60271 1321 aaKnown RBP22.27■■□□□ 1.16
ATG13-222ENST00000534610 SLC4A1APQ9BWU0 796 aaKnown RBP22.26■■□□□ 1.15
ATG13-222ENST00000534610 ZFYVE16Q7Z3T8 1539 aa22.26■■□□□ 1.15
ATG13-222ENST00000534610 SIN3AQ96ST3 1273 aa22.26■■□□□ 1.15
ATG13-222ENST00000534610 TRAPPC8Q9Y2L5 1435 aa22.26■■□□□ 1.15
ATG13-222ENST00000534610 RTEL1-TNFRSF6BF6WH68 1400 aa22.24■■□□□ 1.15
ATG13-222ENST00000534610 MADDQ8WXG6 1647 aa22.24■■□□□ 1.15
ATG13-222ENST00000534610 AFAP1Q8N556 730 aa22.23■■□□□ 1.15
ATG13-222ENST00000534610 KDM5CP41229 1560 aa22.23■■□□□ 1.15
ATG13-222ENST00000534610 PLXNC1O60486 1568 aa22.22■■□□□ 1.15
ATG13-222ENST00000534610 MYT1LQ9UL68 1186 aa22.21■■□□□ 1.15
ATG13-222ENST00000534610 MAGI2Q86UL8 1455 aa22.2■■□□□ 1.14
ATG13-222ENST00000534610 DUOX2Q9NRD8 1548 aa22.19■■□□□ 1.14
ATG13-222ENST00000534610 NUP155O75694 1391 aa22.19■■□□□ 1.14
ATG13-222ENST00000534610 HECW2Q9P2P5 1572 aa22.18■■□□□ 1.14
ATG13-222ENST00000534610 PTPRMP28827 1452 aa22.17■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms