RNA–Protein interactions for RNA: ENST00000534495.1

LMNB2-206, Transcript of lamin B2, humanhuman

TSL 3

Gene LMNB2, Length 491 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB2-206ENST00000534495 ARHGAP5Q13017 1502 aa34.24■■■■□ 3.07
LMNB2-206ENST00000534495 ZMYM4Q5VZL5 1548 aa34.24■■■■□ 3.07
LMNB2-206ENST00000534495 PREX2Q70Z35 1606 aa34.22■■■■□ 3.07
LMNB2-206ENST00000534495 ARHGEF40Q8TER5 1519 aa34.2■■■■□ 3.07
LMNB2-206ENST00000534495 POGZQ7Z3K3 1410 aa34.2■■■■□ 3.06
LMNB2-206ENST00000534495 CDC42BPAQ5VT25 1732 aa34.18■■■■□ 3.06
LMNB2-206ENST00000534495 MAGI2Q86UL8 1455 aa34.14■■■■□ 3.06
LMNB2-206ENST00000534495 ZFYVE16Q7Z3T8 1539 aa34.11■■■■□ 3.05
LMNB2-206ENST00000534495 YEATS2Q9ULM3 1422 aa34.09■■■■□ 3.05
LMNB2-206ENST00000534495 MTUS2Q5JR59 1369 aa34.09■■■■□ 3.05
LMNB2-206ENST00000534495 ZNF518AQ6AHZ1 1483 aa34.07■■■■□ 3.05
LMNB2-206ENST00000534495 ADAMTSL3P82987 1691 aa34.06■■■■□ 3.04
LMNB2-206ENST00000534495 GPATCH8Q9UKJ3 1502 aaKnown RBP34.05■■■■□ 3.04
LMNB2-206ENST00000534495 BCORL1Q5H9F3 1711 aa34.05■■■■□ 3.04
LMNB2-206ENST00000534495 ABCC1P33527 1531 aa34.04■■■■□ 3.04
LMNB2-206ENST00000534495 KDM5CP41229 1560 aa34.04■■■■□ 3.04
LMNB2-206ENST00000534495 VPS8Q8N3P4 1428 aa34.03■■■■□ 3.04
LMNB2-206ENST00000534495 EHBP1L1Q8N3D4 1523 aa34.02■■■■□ 3.04
LMNB2-206ENST00000534495 ARID4BQ4LE39 1312 aaPredicted RBP34.02■■■■□ 3.04
LMNB2-206ENST00000534495 ARHGEF12Q9NZN5 1544 aa34.01■■■■□ 3.04
LMNB2-206ENST00000534495 ITSN2Q9NZM3 1697 aa34.01■■■■□ 3.04
LMNB2-206ENST00000534495 AFAP1Q8N556 730 aa34.01■■■■□ 3.03
LMNB2-206ENST00000534495 SIGLEC1Q9BZZ2 1709 aa34.01■■■■□ 3.03
LMNB2-206ENST00000534495 SAMD9LQ8IVG5 1584 aa33.97■■■■□ 3.03
LMNB2-206ENST00000534495 CCNB3Q8WWL7 1395 aa33.97■■■■□ 3.03
LMNB2-206ENST00000534495 TRAPPC8Q9Y2L5 1435 aa33.95■■■■□ 3.02
LMNB2-206ENST00000534495 ATP10AO60312 1499 aa33.95■■■■□ 3.02
LMNB2-206ENST00000534495 TIAM1Q13009 1591 aa33.94■■■■□ 3.02
LMNB2-206ENST00000534495 HECW2Q9P2P5 1572 aa33.94■■■■□ 3.02
LMNB2-206ENST00000534495 MADDQ8WXG6 1647 aa33.91■■■■□ 3.02
LMNB2-206ENST00000534495 MLH3Q9UHC1 1453 aa33.91■■■■□ 3.02
LMNB2-206ENST00000534495 CFDP1Q9UEE9 299 aaPredicted RBP33.91■■■■□ 3.02
LMNB2-206ENST00000534495 ZNF777Q9ULD5 760 aaPredicted RBP33.91■■■■□ 3.02
LMNB2-206ENST00000534495 C9orf84Q5VXU9 1444 aa33.89■■■■□ 3.02
LMNB2-206ENST00000534495 SYCP2Q9BX26 1530 aa33.88■■■■□ 3.01
LMNB2-206ENST00000534495 PTPRMP28827 1452 aa33.88■■■■□ 3.01
LMNB2-206ENST00000534495 SUPT6HQ7KZ85 1726 aaKnown RBP33.87■■■■□ 3.01
LMNB2-206ENST00000534495 DIP2CQ9Y2E4 1556 aa33.86■■■■□ 3.01
LMNB2-206ENST00000534495 PLEKHH2Q8IVE3 1493 aa33.84■■■■□ 3.01
LMNB2-206ENST00000534495 ABCA6Q8N139 1617 aa33.84■■■■□ 3.01
LMNB2-206ENST00000534495 KIAA1107Q9UPP5 1409 aa33.84■■■■□ 3.01
LMNB2-206ENST00000534495 KIDINS220Q9ULH0 1771 aa33.83■■■■□ 3.01
LMNB2-206ENST00000534495 MYT1LQ9UL68 1186 aa33.83■■■■□ 3.01
LMNB2-206ENST00000534495 MAP3K1Q13233 1512 aa33.82■■■■□ 3
LMNB2-206ENST00000534495 NCOA2Q15596 1464 aa33.82■■■■□ 3
LMNB2-206ENST00000534495 RIMS1Q86UR5 1692 aaKnown RBP33.81■■■■□ 3
LMNB2-206ENST00000534495 HNRNPMP52272 730 aaKnown RBP eCLIP33.81■■■■□ 3
LMNB2-206ENST00000534495 LRRC9Q6ZRR7 1453 aa33.8■■■■□ 3
LMNB2-206ENST00000534495 REREQ9P2R6 1566 aa33.8■■■■□ 3
LMNB2-206ENST00000534495 MLECQ14165 292 aa33.75■■■□□ 2.99
LMNB2-206ENST00000534495 ZNF644Q9H582 1327 aaPredicted RBP33.75■■■□□ 2.99
LMNB2-206ENST00000534495 FER1L4A9Z1Z3 1794 aa33.75■■■□□ 2.99
LMNB2-206ENST00000534495 SPAG9O60271 1321 aaKnown RBP33.71■■■□□ 2.99
LMNB2-206ENST00000534495 KANK4Q5T7N3 995 aaPredicted RBP33.69■■■□□ 2.98
LMNB2-206ENST00000534495 MBD5Q9P267 1494 aa33.69■■■□□ 2.98
LMNB2-206ENST00000534495 AGLP35573 1532 aa33.69■■■□□ 2.98
LMNB2-206ENST00000534495 INO80Q9ULG1 1556 aaPredicted RBP33.68■■■□□ 2.98
LMNB2-206ENST00000534495 ATP7AQ04656 1500 aa33.68■■■□□ 2.98
LMNB2-206ENST00000534495 CAMSAP2Q08AD1 1489 aa33.63■■■□□ 2.97
LMNB2-206ENST00000534495 APLP2Q06481 763 aa33.55■■■□□ 2.96
LMNB2-206ENST00000534495 PLXNC1O60486 1568 aa33.54■■■□□ 2.96
LMNB2-206ENST00000534495 RTEL1-TNFRSF6BF6WH68 1400 aa33.53■■■□□ 2.96
LMNB2-206ENST00000534495 ADGBQ8N7X0 1667 aa33.53■■■□□ 2.96
LMNB2-206ENST00000534495 CCDC141Q6ZP82 1450 aa33.53■■■□□ 2.96
LMNB2-206ENST00000534495 A2MP01023 1474 aa33.52■■■□□ 2.96
LMNB2-206ENST00000534495 RSPH4AQ5TD94 716 aa33.52■■■□□ 2.96
LMNB2-206ENST00000534495 PLPPR3Q6T4P5 718 aa33.51■■■□□ 2.95
LMNB2-206ENST00000534495 MYOM3Q5VTT5 1437 aa33.51■■■□□ 2.95
LMNB2-206ENST00000534495 ARHGEF5Q12774 1597 aa33.51■■■□□ 2.95
LMNB2-206ENST00000534495 LMTK3Q96Q04 1460 aa33.49■■■□□ 2.95
LMNB2-206ENST00000534495 MIA2Q96PC5 1412 aa33.48■■■□□ 2.95
LMNB2-206ENST00000534495 CEBPAP49715 358 aaPredicted RBP33.44■■■□□ 2.94
LMNB2-206ENST00000534495 C3P01024 1663 aa33.42■■■□□ 2.94
LMNB2-206ENST00000534495 SETD1BQ9UPS6 1966 aaKnown RBP33.42■■■□□ 2.94
LMNB2-206ENST00000534495 ESF1Q9H501 851 aaKnown RBP33.4■■■□□ 2.94
LMNB2-206ENST00000534495 CNTLNQ9NXG0 1405 aa33.39■■■□□ 2.94
LMNB2-206ENST00000534495 DHX29Q7Z478 1369 aaKnown RBP33.37■■■□□ 2.93
LMNB2-206ENST00000534495 PREX1Q8TCU6 1659 aa33.36■■■□□ 2.93
LMNB2-206ENST00000534495 TSPY4P0CV99 314 aa33.36■■■□□ 2.93
LMNB2-206ENST00000534495 TSPY10P0CW01 314 aa33.36■■■□□ 2.93
LMNB2-206ENST00000534495 MROH2AA6NES4 1674 aa33.36■■■□□ 2.93
LMNB2-206ENST00000534495 MAST1Q9Y2H9 1570 aa33.34■■■□□ 2.93
LMNB2-206ENST00000534495 PTPN23Q9H3S7 1636 aa33.31■■■□□ 2.92
LMNB2-206ENST00000534495 CLTCQ00610 1675 aaKnown RBP33.3■■■□□ 2.92
LMNB2-206ENST00000534495 GGT6Q6P531 493 aa33.3■■■□□ 2.92
LMNB2-206ENST00000534495 FGD6Q6ZV73 1430 aa33.28■■■□□ 2.92
LMNB2-206ENST00000534495 HSPA2P54652 639 aa33.27■■■□□ 2.92
LMNB2-206ENST00000534495 PPP6R1Q9UPN7 881 aa33.27■■■□□ 2.92
LMNB2-206ENST00000534495 ZMYM3Q14202 1370 aa33.25■■■□□ 2.91
LMNB2-206ENST00000534495 TCOF1Q13428 1488 aaKnown RBP33.24■■■□□ 2.91
LMNB2-206ENST00000534495 KIF3BO15066 747 aa33.22■■■□□ 2.91
LMNB2-206ENST00000534495 CROCC2H7BZ55 1655 aa33.22■■■□□ 2.91
LMNB2-206ENST00000534495 UHRF1BP1Q6BDS2 1440 aa33.21■■■□□ 2.91
LMNB2-206ENST00000534495 ABCC5O15440 1437 aa33.19■■■□□ 2.9
LMNB2-206ENST00000534495 NPATQ14207 1427 aa33.19■■■□□ 2.9
LMNB2-206ENST00000534495 DNMT1P26358 1616 aaKnown RBP33.17■■■□□ 2.9
LMNB2-206ENST00000534495 SHANK2Q9UPX8 1470 aa33.17■■■□□ 2.9
LMNB2-206ENST00000534495 FAM135AQ9P2D6 1515 aa33.14■■■□□ 2.9
LMNB2-206ENST00000534495 DAPK1P53355 1430 aa33.14■■■□□ 2.9
LMNB2-206ENST00000534495 EIF2AK4Q9P2K8 1649 aaKnown RBP33.12■■■□□ 2.89
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms