RNA–Protein interactions for RNA: ENST00000534406.1

SIPA1-210, Transcript of signal-induced proliferation-associated 1, humanhuman

TSL 3

Gene SIPA1, Length 351 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1-210ENST00000534406 NCOA2Q15596 1464 aa37.9■■■■□ 3.66
SIPA1-210ENST00000534406 KANK4Q5T7N3 995 aaPredicted RBP37.9■■■■□ 3.66
SIPA1-210ENST00000534406 CCNB3Q8WWL7 1395 aa37.89■■■■□ 3.66
SIPA1-210ENST00000534406 COL17A1Q9UMD9 1497 aaPredicted RBP37.88■■■■□ 3.65
SIPA1-210ENST00000534406 ITSN2Q9NZM3 1697 aa37.88■■■■□ 3.65
SIPA1-210ENST00000534406 GPATCH8Q9UKJ3 1502 aaKnown RBP37.87■■■■□ 3.65
SIPA1-210ENST00000534406 AKNAQ7Z591 1439 aa37.87■■■■□ 3.65
SIPA1-210ENST00000534406 EFCAB2Q5VUJ9 269 aa37.85■■■■□ 3.65
SIPA1-210ENST00000534406 ADGRL1O94910 1474 aa37.81■■■■□ 3.64
SIPA1-210ENST00000534406 DENND4BO75064 1496 aaPredicted RBP37.74■■■■□ 3.63
SIPA1-210ENST00000534406 ABCC1P33527 1531 aa37.73■■■■□ 3.63
SIPA1-210ENST00000534406 FRMPD1Q5SYB0 1578 aa37.72■■■■□ 3.63
SIPA1-210ENST00000534406 RICTORQ6R327 1708 aa37.72■■■■□ 3.63
SIPA1-210ENST00000534406 SAMD9LQ8IVG5 1584 aa37.72■■■■□ 3.63
SIPA1-210ENST00000534406 CFDP1Q9UEE9 299 aaPredicted RBP37.71■■■■□ 3.63
SIPA1-210ENST00000534406 SCAPERQ9BY12 1400 aa37.7■■■■□ 3.63
SIPA1-210ENST00000534406 POGZQ7Z3K3 1410 aa37.67■■■■□ 3.62
SIPA1-210ENST00000534406 RAPGEF3O95398 923 aa37.64■■■■□ 3.62
SIPA1-210ENST00000534406 ZNF777Q9ULD5 760 aaPredicted RBP37.64■■■■□ 3.62
SIPA1-210ENST00000534406 PLEKHH2Q8IVE3 1493 aa37.64■■■■□ 3.62
SIPA1-210ENST00000534406 MYOM3Q5VTT5 1437 aa37.63■■■■□ 3.61
SIPA1-210ENST00000534406 SYCP2Q9BX26 1530 aa37.61■■■■□ 3.61
SIPA1-210ENST00000534406 ZMYM4Q5VZL5 1548 aa37.61■■■■□ 3.61
SIPA1-210ENST00000534406 ZNF518AQ6AHZ1 1483 aa37.59■■■■□ 3.61
SIPA1-210ENST00000534406 ARHGEF12Q9NZN5 1544 aa37.58■■■■□ 3.61
SIPA1-210ENST00000534406 KIAA1107Q9UPP5 1409 aa37.57■■■■□ 3.6
SIPA1-210ENST00000534406 CAMSAP2Q08AD1 1489 aa37.56■■■■□ 3.6
SIPA1-210ENST00000534406 MIA2Q96PC5 1412 aa37.55■■■■□ 3.6
SIPA1-210ENST00000534406 KDM5CP41229 1560 aa37.55■■■■□ 3.6
SIPA1-210ENST00000534406 TRAPPC8Q9Y2L5 1435 aa37.51■■■■□ 3.59
SIPA1-210ENST00000534406 ZNF644Q9H582 1327 aaPredicted RBP37.5■■■■□ 3.59
SIPA1-210ENST00000534406 ARHGEF40Q8TER5 1519 aa37.49■■■■□ 3.59
SIPA1-210ENST00000534406 MAGI2Q86UL8 1455 aa37.46■■■■□ 3.59
SIPA1-210ENST00000534406 FGD6Q6ZV73 1430 aa37.46■■■■□ 3.59
SIPA1-210ENST00000534406 HECW2Q9P2P5 1572 aa37.46■■■■□ 3.59
SIPA1-210ENST00000534406 ZFYVE16Q7Z3T8 1539 aa37.45■■■■□ 3.59
SIPA1-210ENST00000534406 PTPN23Q9H3S7 1636 aa37.44■■■■□ 3.58
SIPA1-210ENST00000534406 HNRNPMP52272 730 aaKnown RBP eCLIP37.43■■■■□ 3.58
SIPA1-210ENST00000534406 PPARGC1BQ86YN6 1023 aaKnown RBP37.43■■■■□ 3.58
SIPA1-210ENST00000534406 AFAP1Q8N556 730 aa37.43■■■■□ 3.58
SIPA1-210ENST00000534406 MBD5Q9P267 1494 aa37.42■■■■□ 3.58
SIPA1-210ENST00000534406 ARHGEF5Q12774 1597 aa37.39■■■■□ 3.58
SIPA1-210ENST00000534406 CCDC141Q6ZP82 1450 aa37.38■■■■□ 3.57
SIPA1-210ENST00000534406 MLH3Q9UHC1 1453 aa37.38■■■■□ 3.57
SIPA1-210ENST00000534406 YEATS2Q9ULM3 1422 aa37.36■■■■□ 3.57
SIPA1-210ENST00000534406 TCOF1Q13428 1488 aaKnown RBP37.36■■■■□ 3.57
SIPA1-210ENST00000534406 INO80Q9ULG1 1556 aaPredicted RBP37.33■■■■□ 3.57
SIPA1-210ENST00000534406 KIDINS220Q9ULH0 1771 aa37.32■■■■□ 3.57
SIPA1-210ENST00000534406 ATP7AQ04656 1500 aa37.31■■■■□ 3.56
SIPA1-210ENST00000534406 ABCA6Q8N139 1617 aa37.3■■■■□ 3.56
SIPA1-210ENST00000534406 MYT1LQ9UL68 1186 aa37.3■■■■□ 3.56
SIPA1-210ENST00000534406 SPAG9O60271 1321 aaKnown RBP37.3■■■■□ 3.56
SIPA1-210ENST00000534406 DIP2CQ9Y2E4 1556 aa37.29■■■■□ 3.56
SIPA1-210ENST00000534406 RSPH4AQ5TD94 716 aa37.28■■■■□ 3.56
SIPA1-210ENST00000534406 ATP10AO60312 1499 aa37.23■■■■□ 3.55
SIPA1-210ENST00000534406 C9orf84Q5VXU9 1444 aa37.23■■■■□ 3.55
SIPA1-210ENST00000534406 CROCC2H7BZ55 1655 aa37.22■■■■□ 3.55
SIPA1-210ENST00000534406 DNMT1P26358 1616 aaKnown RBP37.22■■■■□ 3.55
SIPA1-210ENST00000534406 RTEL1-TNFRSF6BF6WH68 1400 aa37.19■■■■□ 3.54
SIPA1-210ENST00000534406 MAST1Q9Y2H9 1570 aa37.19■■■■□ 3.54
SIPA1-210ENST00000534406 REREQ9P2R6 1566 aa37.18■■■■□ 3.54
SIPA1-210ENST00000534406 SHANK2Q9UPX8 1470 aa37.16■■■■□ 3.54
SIPA1-210ENST00000534406 FAM50AQ14320 339 aaKnown RBP37.16■■■■□ 3.54
SIPA1-210ENST00000534406 DAPK1P53355 1430 aa37.15■■■■□ 3.54
SIPA1-210ENST00000534406 SIGLEC1Q9BZZ2 1709 aa37.14■■■■□ 3.54
SIPA1-210ENST00000534406 ABCC5O15440 1437 aa37.14■■■■□ 3.54
SIPA1-210ENST00000534406 TSPY4P0CV99 314 aa37.14■■■■□ 3.54
SIPA1-210ENST00000534406 TSPY10P0CW01 314 aa37.14■■■■□ 3.54
SIPA1-210ENST00000534406 ADGBQ8N7X0 1667 aa37.12■■■■□ 3.53
SIPA1-210ENST00000534406 RRBP1Q9P2E9 1410 aaKnown RBP37.1■■■■□ 3.53
SIPA1-210ENST00000534406 ARID4BQ4LE39 1312 aaPredicted RBP37.08■■■■□ 3.53
SIPA1-210ENST00000534406 PLXNC1O60486 1568 aa37.07■■■■□ 3.52
SIPA1-210ENST00000534406 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP37.06■■■■□ 3.52
SIPA1-210ENST00000534406 A2MP01023 1474 aa37.05■■■■□ 3.52
SIPA1-210ENST00000534406 BCORL1Q5H9F3 1711 aa37.04■■■■□ 3.52
SIPA1-210ENST00000534406 AGLP35573 1532 aa37.03■■■■□ 3.52
SIPA1-210ENST00000534406 ADAMTSL3P82987 1691 aa36.95■■■■□ 3.51
SIPA1-210ENST00000534406 DHX29Q7Z478 1369 aaKnown RBP36.93■■■■□ 3.5
SIPA1-210ENST00000534406 ADGRL2O95490 1459 aa36.93■■■■□ 3.5
SIPA1-210ENST00000534406 KDM4FA0A1W2PPD8 638 aa36.91■■■■□ 3.5
SIPA1-210ENST00000534406 ANKRD30AQ9BXX3 1397 aa36.91■■■■□ 3.5
SIPA1-210ENST00000534406 KIF15Q9NS87 1388 aa36.9■■■■□ 3.5
SIPA1-210ENST00000534406 CHIC2Q9UKJ5 165 aa36.89■■■■□ 3.5
SIPA1-210ENST00000534406 DUOX2Q9NRD8 1548 aa36.89■■■■□ 3.5
SIPA1-210ENST00000534406 PTPRKQ15262 1439 aa36.88■■■■□ 3.49
SIPA1-210ENST00000534406 MADDQ8WXG6 1647 aa36.88■■■■□ 3.49
SIPA1-210ENST00000534406 MLECQ14165 292 aa36.85■■■■□ 3.49
SIPA1-210ENST00000534406 FER1L4A9Z1Z3 1794 aa36.85■■■■□ 3.49
SIPA1-210ENST00000534406 NCOA1Q15788 1441 aa36.85■■■■□ 3.49
SIPA1-210ENST00000534406 EIF2AK4Q9P2K8 1649 aaKnown RBP36.84■■■■□ 3.49
SIPA1-210ENST00000534406 ITGAEP38570 1179 aa36.83■■■■□ 3.49
SIPA1-210ENST00000534406 RRP7BPQ9NSQ0 103 aa36.81■■■■□ 3.48
SIPA1-210ENST00000534406 ROCK1Q13464 1354 aa36.79■■■■□ 3.48
SIPA1-210ENST00000534406 ERBINQ96RT1 1412 aa36.79■■■■□ 3.48
SIPA1-210ENST00000534406 RIMS1Q86UR5 1692 aaKnown RBP36.78■■■■□ 3.48
SIPA1-210ENST00000534406 RNF17Q9BXT8 1623 aaKnown RBP36.74■■■■□ 3.47
SIPA1-210ENST00000534406 KIF3BO15066 747 aa36.73■■■■□ 3.47
SIPA1-210ENST00000534406 GGT6Q6P531 493 aa36.68■■■■□ 3.46
SIPA1-210ENST00000534406 PTPRMP28827 1452 aa36.68■■■■□ 3.46
SIPA1-210ENST00000534406 CNTLNQ9NXG0 1405 aa36.66■■■■□ 3.46
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms