RNA–Protein interactions for RNA: ENST00000534284.1

CYCSP28-201, Transcript of cytochrome c, somatic pseudogene 28, humanhuman

BASIC

Gene CYCSP28, Length 321 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYCSP28-201ENST00000534284 LMOD2Q6P5Q4 547 aa8.23□□□□□ -1.09
CYCSP28-201ENST00000534284 PSEN1P49768 467 aa8.22□□□□□ -1.09
CYCSP28-201ENST00000534284 TMEM132AQ24JP5 1023 aa8.22□□□□□ -1.09
CYCSP28-201ENST00000534284 ERICH6Q7L0X2 663 aa8.22□□□□□ -1.09
CYCSP28-201ENST00000534284 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.19□□□□□ -1.1
CYCSP28-201ENST00000534284 OCEL1Q9H607 264 aa8.19□□□□□ -1.1
CYCSP28-201ENST00000534284 MFRPQ9BY79 579 aa8.18□□□□□ -1.1
CYCSP28-201ENST00000534284 MMRN1Q13201 1228 aa8.16□□□□□ -1.1
CYCSP28-201ENST00000534284 SPNS2Q8IVW8 549 aa8.16□□□□□ -1.1
CYCSP28-201ENST00000534284 MARVELD3Q96A59 401 aa8.15□□□□□ -1.1
CYCSP28-201ENST00000534284 CCDC180Q9P1Z9 1646 aa8.14□□□□□ -1.11
CYCSP28-201ENST00000534284 NLRP6P59044 892 aa8.14□□□□□ -1.11
CYCSP28-201ENST00000534284 E2F4Q16254 413 aa8.14□□□□□ -1.11
CYCSP28-201ENST00000534284 ARHGEF1Q92888 912 aaKnown RBP8.14□□□□□ -1.11
CYCSP28-201ENST00000534284 EFCAB3Q8N7B9 438 aa8.13□□□□□ -1.11
CYCSP28-201ENST00000534284 PDCD7Q8N8D1 485 aaKnown RBP8.13□□□□□ -1.11
CYCSP28-201ENST00000534284 CABP2Q9NPB3 220 aa8.13□□□□□ -1.11
CYCSP28-201ENST00000534284 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.13□□□□□ -1.11
CYCSP28-201ENST00000534284 TMEM121BQ9BXQ6 578 aaPredicted RBP8.12□□□□□ -1.11
CYCSP28-201ENST00000534284 PPP1R37O75864 691 aa8.11□□□□□ -1.11
CYCSP28-201ENST00000534284 C14orf37Q86TY3 774 aa8.11□□□□□ -1.11
CYCSP28-201ENST00000534284 SOX12O15370 315 aa8.1□□□□□ -1.11
CYCSP28-201ENST00000534284 PHF8Q9UPP1 1060 aa8.1□□□□□ -1.11
CYCSP28-201ENST00000534284 POTEB3A0JP26 581 aa8.09□□□□□ -1.11
CYCSP28-201ENST00000534284 POTEBQ6S5H4 581 aa8.09□□□□□ -1.11
CYCSP28-201ENST00000534284 SEMA3EO15041 775 aa8.08□□□□□ -1.12
CYCSP28-201ENST00000534284 SNPHO15079 494 aa8.08□□□□□ -1.12
CYCSP28-201ENST00000534284 NEUROD2Q15784 382 aa8.08□□□□□ -1.12
CYCSP28-201ENST00000534284 ZC3H15Q8WU90 426 aaKnown RBP8.08□□□□□ -1.12
CYCSP28-201ENST00000534284 GOLGA2Q08379 1002 aa8.06□□□□□ -1.12
CYCSP28-201ENST00000534284 SMYD5Q6GMV2 418 aa8.06□□□□□ -1.12
CYCSP28-201ENST00000534284 FBXO22Q8NEZ5 403 aa8.06□□□□□ -1.12
CYCSP28-201ENST00000534284 LARP6Q9BRS8 491 aaKnown RBP8.06□□□□□ -1.12
CYCSP28-201ENST00000534284 PDE4AP27815 886 aa8.05□□□□□ -1.12
CYCSP28-201ENST00000534284 BRPF1P55201 1214 aaPredicted RBP8.05□□□□□ -1.12
CYCSP28-201ENST00000534284 TESPA1A2RU30 521 aaPredicted RBP8.04□□□□□ -1.12
CYCSP28-201ENST00000534284 SLC24A3Q9HC58 644 aa8.04□□□□□ -1.12
CYCSP28-201ENST00000534284 KRTAP3-3Q9BYR6 98 aa8.03□□□□□ -1.12
CYCSP28-201ENST00000534284 KRTAP3-2Q9BYR7 98 aa8.03□□□□□ -1.12
CYCSP28-201ENST00000534284 EMP3P54852 163 aa8.01□□□□□ -1.13
CYCSP28-201ENST00000534284 MKRN3Q13064 507 aaKnown RBP8.01□□□□□ -1.13
CYCSP28-201ENST00000534284 DPY19L2Q6NUT2 758 aa8.01□□□□□ -1.13
CYCSP28-201ENST00000534284 ILDR1Q86SU0 546 aaPredicted RBP8.01□□□□□ -1.13
CYCSP28-201ENST00000534284 L3MBTL3Q96JM7 780 aaPredicted RBP8.01□□□□□ -1.13
CYCSP28-201ENST00000534284 HS3ST6Q96QI5 342 aa8.01□□□□□ -1.13
CYCSP28-201ENST00000534284 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.01□□□□□ -1.13
CYCSP28-201ENST00000534284 ZCCHC6Q5VYS8 1495 aaKnown RBP8□□□□□ -1.13
CYCSP28-201ENST00000534284 C3orf67Q6ZVT6 689 aa8□□□□□ -1.13
CYCSP28-201ENST00000534284 DDX27Q96GQ7 796 aaKnown RBP8□□□□□ -1.13
CYCSP28-201ENST00000534284 ARXQ96QS3 562 aa8□□□□□ -1.13
CYCSP28-201ENST00000534284 NCKAP5LQ9HCH0 1330 aa8□□□□□ -1.13
CYCSP28-201ENST00000534284 FAM205CA6NFA0 338 aa7.99□□□□□ -1.13
CYCSP28-201ENST00000534284 ZMYND10O75800 440 aa7.95□□□□□ -1.14
CYCSP28-201ENST00000534284 HOXB3P14651 431 aaPredicted RBP7.95□□□□□ -1.14
CYCSP28-201ENST00000534284 MFSD10Q14728 455 aa7.95□□□□□ -1.14
CYCSP28-201ENST00000534284 MS4A4AQ96JQ5 239 aa7.95□□□□□ -1.14
CYCSP28-201ENST00000534284 KRI1Q8N9T8 703 aaKnown RBP7.94□□□□□ -1.14
CYCSP28-201ENST00000534284 CRISPLD2Q9H0B8 497 aa7.94□□□□□ -1.14
CYCSP28-201ENST00000534284 GPIHBP1Q8IV16 184 aa7.91□□□□□ -1.14
CYCSP28-201ENST00000534284 HOMEZQ8IX15 550 aa7.91□□□□□ -1.14
CYCSP28-201ENST00000534284 ARIH1Q9Y4X5 557 aaPredicted RBP7.91□□□□□ -1.14
CYCSP28-201ENST00000534284 BARGINQ6ZT62 677 aa7.9□□□□□ -1.14
CYCSP28-201ENST00000534284 DCAF1Q9Y4B6 1507 aa7.89□□□□□ -1.15
CYCSP28-201ENST00000534284 RBM26Q5T8P6 1007 aaKnown RBP7.89□□□□□ -1.15
CYCSP28-201ENST00000534284 AK7Q96M32 723 aa7.89□□□□□ -1.15
CYCSP28-201ENST00000534284 BOLA1Q9Y3E2 137 aa7.89□□□□□ -1.15
CYCSP28-201ENST00000534284 CAMK2BQ13554 666 aa7.88□□□□□ -1.15
CYCSP28-201ENST00000534284 PPP1R15BQ5SWA1 713 aa7.88□□□□□ -1.15
CYCSP28-201ENST00000534284 DAXXQ9UER7 740 aaPredicted RBP7.88□□□□□ -1.15
CYCSP28-201ENST00000534284 HOXB1P14653 301 aaPredicted RBP7.87□□□□□ -1.15
CYCSP28-201ENST00000534284 MLLT3P42568 568 aaPredicted RBP7.87□□□□□ -1.15
CYCSP28-201ENST00000534284 SUPT5HO00267 1087 aaKnown RBP7.86□□□□□ -1.15
CYCSP28-201ENST00000534284 GPBP1L1Q9HC44 474 aaPredicted RBP7.84□□□□□ -1.15
CYCSP28-201ENST00000534284 GPHNQ9NQX3 736 aaPredicted RBP7.84□□□□□ -1.15
CYCSP28-201ENST00000534284 DPYSL4O14531 572 aa7.83□□□□□ -1.16
CYCSP28-201ENST00000534284 IL27Q8NEV9 243 aa7.83□□□□□ -1.16
CYCSP28-201ENST00000534284 TMEM92Q6UXU6 159 aa7.82□□□□□ -1.16
CYCSP28-201ENST00000534284 ERBB3P21860 1342 aa7.81□□□□□ -1.16
CYCSP28-201ENST00000534284 SPDYE16A6NNV3 312 aaPredicted RBP7.81□□□□□ -1.16
CYCSP28-201ENST00000534284 TMC2Q8TDI7 906 aa7.81□□□□□ -1.16
CYCSP28-201ENST00000534284 G3V3G9 751 aa7.8□□□□□ -1.16
CYCSP28-201ENST00000534284 ZNF710Q8N1W2 664 aa7.8□□□□□ -1.16
CYCSP28-201ENST00000534284 KDM4CQ9H3R0 1056 aa7.8□□□□□ -1.16
CYCSP28-201ENST00000534284 DOK7Q18PE1 504 aa7.79□□□□□ -1.16
CYCSP28-201ENST00000534284 SHROOM4Q9ULL8 1493 aa7.79□□□□□ -1.16
CYCSP28-201ENST00000534284 PDE4DQ08499 809 aa7.78□□□□□ -1.16
CYCSP28-201ENST00000534284 DSG2Q14126 1118 aa7.78□□□□□ -1.16
CYCSP28-201ENST00000534284 VARS2Q5ST30 1063 aaKnown RBP7.78□□□□□ -1.16
CYCSP28-201ENST00000534284 EMILIN3Q9NT22 766 aa7.78□□□□□ -1.16
CYCSP28-201ENST00000534284 TRIM66O15016 1216 aa7.77□□□□□ -1.17
CYCSP28-201ENST00000534284 PDIA6Q15084 440 aa7.77□□□□□ -1.17
CYCSP28-201ENST00000534284 NUTM2FA1L443 756 aa7.75□□□□□ -1.17
CYCSP28-201ENST00000534284 GRXCR2A6NFK2 248 aa7.75□□□□□ -1.17
CYCSP28-201ENST00000534284 GPR153Q6NV75 609 aa7.75□□□□□ -1.17
CYCSP28-201ENST00000534284 MICALL2Q8IY33 904 aa7.75□□□□□ -1.17
CYCSP28-201ENST00000534284 RNF166Q96A37 237 aaPredicted RBP7.75□□□□□ -1.17
CYCSP28-201ENST00000534284 MAP3K9P80192 1104 aa7.74□□□□□ -1.17
CYCSP28-201ENST00000534284 FOXK1P85037 733 aa7.74□□□□□ -1.17
CYCSP28-201ENST00000534284 PLPP6Q8IY26 295 aa7.73□□□□□ -1.17
CYCSP28-201ENST00000534284 ZNF687Q8N1G0 1237 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms