RNA–Protein interactions for RNA: ENST00000534045.5

LRRK1-210, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 3

Gene LRRK1, Length 569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-210ENST00000534045 LOC105371045A0A1W2PR82 267 aa30.32■■■□□ 2.44
LRRK1-210ENST00000534045 ARHGEF40Q8TER5 1519 aa30.32■■■□□ 2.44
LRRK1-210ENST00000534045 CEP162Q5TB80 1403 aa30.3■■■□□ 2.44
LRRK1-210ENST00000534045 ZMYM4Q5VZL5 1548 aa30.27■■■□□ 2.44
LRRK1-210ENST00000534045 PREX2Q70Z35 1606 aa30.27■■■□□ 2.44
LRRK1-210ENST00000534045 CDC42BPBQ9Y5S2 1711 aa30.27■■■□□ 2.44
LRRK1-210ENST00000534045 MAGI2Q86UL8 1455 aa30.25■■■□□ 2.43
LRRK1-210ENST00000534045 POGZQ7Z3K3 1410 aa30.25■■■□□ 2.43
LRRK1-210ENST00000534045 ZNF777Q9ULD5 760 aaPredicted RBP30.24■■■□□ 2.43
LRRK1-210ENST00000534045 AFAP1Q8N556 730 aa30.23■■■□□ 2.43
LRRK1-210ENST00000534045 MTUS2Q5JR59 1369 aa30.23■■■□□ 2.43
LRRK1-210ENST00000534045 CDC42BPAQ5VT25 1732 aa30.22■■■□□ 2.43
LRRK1-210ENST00000534045 ZFYVE16Q7Z3T8 1539 aa30.21■■■□□ 2.43
LRRK1-210ENST00000534045 YEATS2Q9ULM3 1422 aa30.2■■■□□ 2.42
LRRK1-210ENST00000534045 MLECQ14165 292 aa30.18■■■□□ 2.42
LRRK1-210ENST00000534045 BCORL1Q5H9F3 1711 aa30.17■■■□□ 2.42
LRRK1-210ENST00000534045 ZNF518AQ6AHZ1 1483 aa30.17■■■□□ 2.42
LRRK1-210ENST00000534045 CFDP1Q9UEE9 299 aaPredicted RBP30.15■■■□□ 2.42
LRRK1-210ENST00000534045 ADAMTSL3P82987 1691 aa30.14■■■□□ 2.42
LRRK1-210ENST00000534045 CCNB3Q8WWL7 1395 aa30.14■■■□□ 2.41
LRRK1-210ENST00000534045 ATP10AO60312 1499 aa30.12■■■□□ 2.41
LRRK1-210ENST00000534045 ITSN2Q9NZM3 1697 aa30.11■■■□□ 2.41
LRRK1-210ENST00000534045 PTPRMP28827 1452 aa30.1■■■□□ 2.41
LRRK1-210ENST00000534045 PLPPR3Q6T4P5 718 aa30.09■■■□□ 2.41
LRRK1-210ENST00000534045 ABCC1P33527 1531 aa30.08■■■□□ 2.41
LRRK1-210ENST00000534045 MADDQ8WXG6 1647 aa30.07■■■□□ 2.4
LRRK1-210ENST00000534045 KDM5CP41229 1560 aa30.07■■■□□ 2.4
LRRK1-210ENST00000534045 HECW2Q9P2P5 1572 aa30.07■■■□□ 2.4
LRRK1-210ENST00000534045 GPATCH8Q9UKJ3 1502 aaKnown RBP30.06■■■□□ 2.4
LRRK1-210ENST00000534045 EHBP1L1Q8N3D4 1523 aa30.06■■■□□ 2.4
LRRK1-210ENST00000534045 C9orf84Q5VXU9 1444 aa30.05■■■□□ 2.4
LRRK1-210ENST00000534045 HNRNPMP52272 730 aaKnown RBP eCLIP30.05■■■□□ 2.4
LRRK1-210ENST00000534045 SIGLEC1Q9BZZ2 1709 aa30.05■■■□□ 2.4
LRRK1-210ENST00000534045 TRAPPC8Q9Y2L5 1435 aa30.04■■■□□ 2.4
LRRK1-210ENST00000534045 RIMS1Q86UR5 1692 aaKnown RBP30.02■■■□□ 2.4
LRRK1-210ENST00000534045 SAMD9LQ8IVG5 1584 aa29.99■■■□□ 2.39
LRRK1-210ENST00000534045 ARHGEF12Q9NZN5 1544 aa29.99■■■□□ 2.39
LRRK1-210ENST00000534045 MLH3Q9UHC1 1453 aa29.99■■■□□ 2.39
LRRK1-210ENST00000534045 FER1L4A9Z1Z3 1794 aa29.98■■■□□ 2.39
LRRK1-210ENST00000534045 SPAG9O60271 1321 aaKnown RBP29.97■■■□□ 2.39
LRRK1-210ENST00000534045 VPS8Q8N3P4 1428 aa29.96■■■□□ 2.39
LRRK1-210ENST00000534045 PLEKHH2Q8IVE3 1493 aa29.96■■■□□ 2.39
LRRK1-210ENST00000534045 ESF1Q9H501 851 aaKnown RBP29.96■■■□□ 2.39
LRRK1-210ENST00000534045 SUPT6HQ7KZ85 1726 aaKnown RBP29.95■■■□□ 2.38
LRRK1-210ENST00000534045 TIAM1Q13009 1591 aa29.94■■■□□ 2.38
LRRK1-210ENST00000534045 ABCA6Q8N139 1617 aa29.94■■■□□ 2.38
LRRK1-210ENST00000534045 DIP2CQ9Y2E4 1556 aa29.94■■■□□ 2.38
LRRK1-210ENST00000534045 SYCP2Q9BX26 1530 aa29.93■■■□□ 2.38
LRRK1-210ENST00000534045 KIAA1107Q9UPP5 1409 aa29.93■■■□□ 2.38
LRRK1-210ENST00000534045 APLP2Q06481 763 aa29.92■■■□□ 2.38
LRRK1-210ENST00000534045 KIDINS220Q9ULH0 1771 aa29.89■■■□□ 2.38
LRRK1-210ENST00000534045 ZNF644Q9H582 1327 aaPredicted RBP29.89■■■□□ 2.38
LRRK1-210ENST00000534045 REREQ9P2R6 1566 aa29.87■■■□□ 2.37
LRRK1-210ENST00000534045 NCOA2Q15596 1464 aa29.83■■■□□ 2.37
LRRK1-210ENST00000534045 CEBPAP49715 358 aaPredicted RBP29.81■■■□□ 2.36
LRRK1-210ENST00000534045 RSPH4AQ5TD94 716 aa29.79■■■□□ 2.36
LRRK1-210ENST00000534045 LRRC9Q6ZRR7 1453 aa29.78■■■□□ 2.36
LRRK1-210ENST00000534045 INO80Q9ULG1 1556 aaPredicted RBP29.77■■■□□ 2.36
LRRK1-210ENST00000534045 KANK4Q5T7N3 995 aaPredicted RBP29.77■■■□□ 2.36
LRRK1-210ENST00000534045 ATP7AQ04656 1500 aa29.76■■■□□ 2.36
LRRK1-210ENST00000534045 AGLP35573 1532 aa29.76■■■□□ 2.35
LRRK1-210ENST00000534045 MAP3K1Q13233 1512 aa29.73■■■□□ 2.35
LRRK1-210ENST00000534045 TSPY4P0CV99 314 aa29.73■■■□□ 2.35
LRRK1-210ENST00000534045 TSPY10P0CW01 314 aa29.73■■■□□ 2.35
LRRK1-210ENST00000534045 HSPA2P54652 639 aa29.72■■■□□ 2.35
LRRK1-210ENST00000534045 ADGBQ8N7X0 1667 aa29.71■■■□□ 2.35
LRRK1-210ENST00000534045 LMTK3Q96Q04 1460 aa29.7■■■□□ 2.35
LRRK1-210ENST00000534045 MBD5Q9P267 1494 aa29.7■■■□□ 2.35
LRRK1-210ENST00000534045 GGT6Q6P531 493 aa29.7■■■□□ 2.35
LRRK1-210ENST00000534045 A2MP01023 1474 aa29.68■■■□□ 2.34
LRRK1-210ENST00000534045 CAMSAP2Q08AD1 1489 aa29.68■■■□□ 2.34
LRRK1-210ENST00000534045 RTEL1-TNFRSF6BF6WH68 1400 aa29.66■■■□□ 2.34
LRRK1-210ENST00000534045 CNTLNQ9NXG0 1405 aa29.65■■■□□ 2.34
LRRK1-210ENST00000534045 PREX1Q8TCU6 1659 aa29.63■■■□□ 2.33
LRRK1-210ENST00000534045 CCDC141Q6ZP82 1450 aa29.63■■■□□ 2.33
LRRK1-210ENST00000534045 PLXNC1O60486 1568 aa29.62■■■□□ 2.33
LRRK1-210ENST00000534045 C3P01024 1663 aa29.61■■■□□ 2.33
LRRK1-210ENST00000534045 PPP6R1Q9UPN7 881 aa29.6■■■□□ 2.33
LRRK1-210ENST00000534045 UHRF1BP1Q6BDS2 1440 aa29.58■■■□□ 2.33
LRRK1-210ENST00000534045 DHX29Q7Z478 1369 aaKnown RBP29.58■■■□□ 2.33
LRRK1-210ENST00000534045 ARHGEF5Q12774 1597 aa29.57■■■□□ 2.32
LRRK1-210ENST00000534045 ZMYM3Q14202 1370 aa29.57■■■□□ 2.32
LRRK1-210ENST00000534045 KIF3BO15066 747 aa29.57■■■□□ 2.32
LRRK1-210ENST00000534045 MROH2AA6NES4 1674 aa29.56■■■□□ 2.32
LRRK1-210ENST00000534045 MYOM3Q5VTT5 1437 aa29.56■■■□□ 2.32
LRRK1-210ENST00000534045 MIA2Q96PC5 1412 aa29.55■■■□□ 2.32
LRRK1-210ENST00000534045 SETD1BQ9UPS6 1966 aaKnown RBP29.52■■■□□ 2.32
LRRK1-210ENST00000534045 CLTCQ00610 1675 aaKnown RBP29.51■■■□□ 2.31
LRRK1-210ENST00000534045 ILDR1Q86SU0 546 aaPredicted RBP29.51■■■□□ 2.31
LRRK1-210ENST00000534045 DMRT2Q9Y5R5 561 aa29.48■■■□□ 2.31
LRRK1-210ENST00000534045 WASHC2CQ9Y4E1 1318 aa29.45■■■□□ 2.3
LRRK1-210ENST00000534045 NPATQ14207 1427 aa29.43■■■□□ 2.3
LRRK1-210ENST00000534045 MAST1Q9Y2H9 1570 aa29.43■■■□□ 2.3
LRRK1-210ENST00000534045 PTPN23Q9H3S7 1636 aa29.41■■■□□ 2.3
LRRK1-210ENST00000534045 CROCC2H7BZ55 1655 aa29.4■■■□□ 2.3
LRRK1-210ENST00000534045 RRP7BPQ9NSQ0 103 aa29.34■■■□□ 2.29
LRRK1-210ENST00000534045 FGD6Q6ZV73 1430 aa29.33■■■□□ 2.29
LRRK1-210ENST00000534045 PTPRKQ15262 1439 aa29.32■■■□□ 2.28
LRRK1-210ENST00000534045 FAM50AQ14320 339 aaKnown RBP29.32■■■□□ 2.28
LRRK1-210ENST00000534045 FAM135AQ9P2D6 1515 aa29.3■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms