RNA–Protein interactions for RNA: ENST00000533998.5

FNTA-214, Transcript of farnesyltransferase, CAAX box, alpha, humanhuman

TSL 3

Gene FNTA, Length 581 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNTA-214ENST00000533998 CDC42BPBQ9Y5S2 1711 aa40.51■■■■■ 4.08
FNTA-214ENST00000533998 ZMYM4Q5VZL5 1548 aa40.46■■■■■ 4.07
FNTA-214ENST00000533998 PREX2Q70Z35 1606 aa40.45■■■■■ 4.07
FNTA-214ENST00000533998 POGZQ7Z3K3 1410 aa40.44■■■■■ 4.06
FNTA-214ENST00000533998 CDC42BPAQ5VT25 1732 aa40.42■■■■■ 4.06
FNTA-214ENST00000533998 MTUS2Q5JR59 1369 aa40.42■■■■■ 4.06
FNTA-214ENST00000533998 ARHGEF40Q8TER5 1519 aa40.4■■■■■ 4.06
FNTA-214ENST00000533998 MAGI2Q86UL8 1455 aa40.39■■■■■ 4.06
FNTA-214ENST00000533998 VPS8Q8N3P4 1428 aa40.36■■■■■ 4.05
FNTA-214ENST00000533998 ZFYVE16Q7Z3T8 1539 aa40.33■■■■■ 4.05
FNTA-214ENST00000533998 ZNF518AQ6AHZ1 1483 aa40.32■■■■■ 4.04
FNTA-214ENST00000533998 GPATCH8Q9UKJ3 1502 aaKnown RBP40.32■■■■■ 4.04
FNTA-214ENST00000533998 EHBP1L1Q8N3D4 1523 aa40.31■■■■■ 4.04
FNTA-214ENST00000533998 YEATS2Q9ULM3 1422 aa40.3■■■■■ 4.04
FNTA-214ENST00000533998 AFAP1Q8N556 730 aa40.28■■■■■ 4.04
FNTA-214ENST00000533998 ABCC1P33527 1531 aa40.26■■■■■ 4.04
FNTA-214ENST00000533998 CCNB3Q8WWL7 1395 aa40.26■■■■■ 4.04
FNTA-214ENST00000533998 ARID4BQ4LE39 1312 aaPredicted RBP40.26■■■■■ 4.04
FNTA-214ENST00000533998 KDM5CP41229 1560 aa40.25■■■■■ 4.03
FNTA-214ENST00000533998 ARHGEF12Q9NZN5 1544 aa40.23■■■■■ 4.03
FNTA-214ENST00000533998 TIAM1Q13009 1591 aa40.22■■■■■ 4.03
FNTA-214ENST00000533998 ADAMTSL3P82987 1691 aa40.21■■■■■ 4.03
FNTA-214ENST00000533998 ITSN2Q9NZM3 1697 aa40.21■■■■■ 4.03
FNTA-214ENST00000533998 BCORL1Q5H9F3 1711 aa40.21■■■■■ 4.03
FNTA-214ENST00000533998 CFDP1Q9UEE9 299 aaPredicted RBP40.2■■■■■ 4.03
FNTA-214ENST00000533998 ZNF777Q9ULD5 760 aaPredicted RBP40.2■■■■■ 4.03
FNTA-214ENST00000533998 SAMD9LQ8IVG5 1584 aa40.18■■■■■ 4.02
FNTA-214ENST00000533998 TRAPPC8Q9Y2L5 1435 aa40.17■■■■■ 4.02
FNTA-214ENST00000533998 ATP10AO60312 1499 aa40.17■■■■■ 4.02
FNTA-214ENST00000533998 HECW2Q9P2P5 1572 aa40.13■■■■■ 4.01
FNTA-214ENST00000533998 SIGLEC1Q9BZZ2 1709 aa40.13■■■■■ 4.01
FNTA-214ENST00000533998 MLH3Q9UHC1 1453 aa40.13■■■■■ 4.01
FNTA-214ENST00000533998 SUPT6HQ7KZ85 1726 aaKnown RBP40.11■■■■■ 4.01
FNTA-214ENST00000533998 MYT1LQ9UL68 1186 aa40.11■■■■■ 4.01
FNTA-214ENST00000533998 MAP3K1Q13233 1512 aa40.1■■■■■ 4.01
FNTA-214ENST00000533998 C9orf84Q5VXU9 1444 aa40.09■■■■■ 4.01
FNTA-214ENST00000533998 KIAA1107Q9UPP5 1409 aa40.08■■■■■ 4.01
FNTA-214ENST00000533998 PLEKHH2Q8IVE3 1493 aa40.08■■■■■ 4.01
FNTA-214ENST00000533998 SYCP2Q9BX26 1530 aa40.07■■■■■ 4.01
FNTA-214ENST00000533998 NCOA2Q15596 1464 aa40.07■■■■■ 4
FNTA-214ENST00000533998 HNRNPMP52272 730 aaKnown RBP eCLIP40.06■■■■■ 4
FNTA-214ENST00000533998 LRRC9Q6ZRR7 1453 aa40.06■■■■■ 4
FNTA-214ENST00000533998 MADDQ8WXG6 1647 aa40.03■■■■■ 4
FNTA-214ENST00000533998 DIP2CQ9Y2E4 1556 aa40.02■■■■■ 4
FNTA-214ENST00000533998 PTPRMP28827 1452 aa40.01■■■■■ 4
FNTA-214ENST00000533998 KIDINS220Q9ULH0 1771 aa40■■■■□ 3.99
FNTA-214ENST00000533998 ABCA6Q8N139 1617 aa39.99■■■■□ 3.99
FNTA-214ENST00000533998 ZNF644Q9H582 1327 aaPredicted RBP39.97■■■■□ 3.99
FNTA-214ENST00000533998 KANK4Q5T7N3 995 aaPredicted RBP39.97■■■■□ 3.99
FNTA-214ENST00000533998 REREQ9P2R6 1566 aa39.96■■■■□ 3.99
FNTA-214ENST00000533998 MLECQ14165 292 aa39.94■■■■□ 3.98
FNTA-214ENST00000533998 SPAG9O60271 1321 aaKnown RBP39.93■■■■□ 3.98
FNTA-214ENST00000533998 RIMS1Q86UR5 1692 aaKnown RBP39.92■■■■□ 3.98
FNTA-214ENST00000533998 APLP2Q06481 763 aa39.9■■■■□ 3.98
FNTA-214ENST00000533998 MBD5Q9P267 1494 aa39.88■■■■□ 3.98
FNTA-214ENST00000533998 FER1L4A9Z1Z3 1794 aa39.84■■■■□ 3.97
FNTA-214ENST00000533998 AGLP35573 1532 aa39.84■■■■□ 3.97
FNTA-214ENST00000533998 ATP7AQ04656 1500 aa39.84■■■■□ 3.97
FNTA-214ENST00000533998 INO80Q9ULG1 1556 aaPredicted RBP39.82■■■■□ 3.97
FNTA-214ENST00000533998 CAMSAP2Q08AD1 1489 aa39.81■■■■□ 3.96
FNTA-214ENST00000533998 RSPH4AQ5TD94 716 aa39.78■■■■□ 3.96
FNTA-214ENST00000533998 RTEL1-TNFRSF6BF6WH68 1400 aa39.73■■■■□ 3.95
FNTA-214ENST00000533998 MYOM3Q5VTT5 1437 aa39.72■■■■□ 3.95
FNTA-214ENST00000533998 CCDC141Q6ZP82 1450 aa39.71■■■■□ 3.95
FNTA-214ENST00000533998 MIA2Q96PC5 1412 aa39.69■■■■□ 3.94
FNTA-214ENST00000533998 A2MP01023 1474 aa39.68■■■■□ 3.94
FNTA-214ENST00000533998 ARHGEF5Q12774 1597 aa39.67■■■■□ 3.94
FNTA-214ENST00000533998 ADGBQ8N7X0 1667 aa39.67■■■■□ 3.94
FNTA-214ENST00000533998 PLPPR3Q6T4P5 718 aa39.65■■■■□ 3.94
FNTA-214ENST00000533998 PLXNC1O60486 1568 aa39.64■■■■□ 3.94
FNTA-214ENST00000533998 TSPY4P0CV99 314 aa39.59■■■■□ 3.93
FNTA-214ENST00000533998 TSPY10P0CW01 314 aa39.59■■■■□ 3.93
FNTA-214ENST00000533998 ESF1Q9H501 851 aaKnown RBP39.58■■■■□ 3.93
FNTA-214ENST00000533998 CEBPAP49715 358 aaPredicted RBP39.56■■■■□ 3.92
FNTA-214ENST00000533998 DHX29Q7Z478 1369 aaKnown RBP39.54■■■■□ 3.92
FNTA-214ENST00000533998 LMTK3Q96Q04 1460 aa39.53■■■■□ 3.92
FNTA-214ENST00000533998 CNTLNQ9NXG0 1405 aa39.51■■■■□ 3.92
FNTA-214ENST00000533998 C3P01024 1663 aa39.47■■■■□ 3.91
FNTA-214ENST00000533998 PTPN23Q9H3S7 1636 aa39.47■■■■□ 3.91
FNTA-214ENST00000533998 MAST1Q9Y2H9 1570 aa39.46■■■■□ 3.91
FNTA-214ENST00000533998 SETD1BQ9UPS6 1966 aaKnown RBP39.46■■■■□ 3.91
FNTA-214ENST00000533998 GGT6Q6P531 493 aa39.45■■■■□ 3.91
FNTA-214ENST00000533998 PPP6R1Q9UPN7 881 aa39.44■■■■□ 3.9
FNTA-214ENST00000533998 FGD6Q6ZV73 1430 aa39.43■■■■□ 3.9
FNTA-214ENST00000533998 MROH2AA6NES4 1674 aa39.41■■■■□ 3.9
FNTA-214ENST00000533998 PREX1Q8TCU6 1659 aa39.38■■■■□ 3.9
FNTA-214ENST00000533998 TCOF1Q13428 1488 aaKnown RBP39.38■■■■□ 3.9
FNTA-214ENST00000533998 KIF3BO15066 747 aa39.37■■■■□ 3.89
FNTA-214ENST00000533998 ZMYM3Q14202 1370 aa39.36■■■■□ 3.89
FNTA-214ENST00000533998 CLTCQ00610 1675 aaKnown RBP39.35■■■■□ 3.89
FNTA-214ENST00000533998 ABCC5O15440 1437 aa39.32■■■■□ 3.89
FNTA-214ENST00000533998 HSPA2P54652 639 aa39.32■■■■□ 3.89
FNTA-214ENST00000533998 CROCC2H7BZ55 1655 aa39.3■■■■□ 3.88
FNTA-214ENST00000533998 SHANK2Q9UPX8 1470 aa39.29■■■■□ 3.88
FNTA-214ENST00000533998 DNMT1P26358 1616 aaKnown RBP39.29■■■■□ 3.88
FNTA-214ENST00000533998 DAPK1P53355 1430 aa39.27■■■■□ 3.88
FNTA-214ENST00000533998 UHRF1BP1Q6BDS2 1440 aa39.27■■■■□ 3.88
FNTA-214ENST00000533998 NPATQ14207 1427 aa39.25■■■■□ 3.87
FNTA-214ENST00000533998 FAM135AQ9P2D6 1515 aa39.21■■■■□ 3.87
FNTA-214ENST00000533998 DUOX2Q9NRD8 1548 aa39.19■■■■□ 3.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms