RNA–Protein interactions for RNA: ENST00000533905.1

CLP1-206, Transcript of cleavage and polyadenylation factor I subunit 1, humanhuman

TSL 4

Gene CLP1, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLP1-206ENST00000533905 PCF11O94913 1555 aaKnown RBP17.1■□□□□ 0.33
CLP1-206ENST00000533905 CFAP74Q9C0B2 1584 aa17.1■□□□□ 0.33
CLP1-206ENST00000533905 SCAPERQ9BY12 1400 aa17.09■□□□□ 0.33
CLP1-206ENST00000533905 PLPPR3Q6T4P5 718 aa17.07■□□□□ 0.32
CLP1-206ENST00000533905 FMN1Q68DA7 1419 aa17.06■□□□□ 0.32
CLP1-206ENST00000533905 TROQ12816 1431 aaPredicted RBP17.04■□□□□ 0.32
CLP1-206ENST00000533905 MYO5CQ9NQX4 1742 aa17.04■□□□□ 0.32
CLP1-206ENST00000533905 MLECQ14165 292 aa17.04■□□□□ 0.32
CLP1-206ENST00000533905 ARHGEF12Q9NZN5 1544 aa17.04■□□□□ 0.32
CLP1-206ENST00000533905 HSPA2P54652 639 aa17.03■□□□□ 0.32
CLP1-206ENST00000533905 CDC42BPBQ9Y5S2 1711 aa17■□□□□ 0.31
CLP1-206ENST00000533905 ARHGAP5Q13017 1502 aa17■□□□□ 0.31
CLP1-206ENST00000533905 KDM5CP41229 1560 aa16.99■□□□□ 0.31
CLP1-206ENST00000533905 AFAP1Q8N556 730 aa16.99■□□□□ 0.31
CLP1-206ENST00000533905 ABCA6Q8N139 1617 aa16.99■□□□□ 0.31
CLP1-206ENST00000533905 MAGI2Q86UL8 1455 aa16.99■□□□□ 0.31
CLP1-206ENST00000533905 DIP2CQ9Y2E4 1556 aa16.98■□□□□ 0.31
CLP1-206ENST00000533905 TRAPPC8Q9Y2L5 1435 aa16.98■□□□□ 0.31
CLP1-206ENST00000533905 FER1L4A9Z1Z3 1794 aa16.98■□□□□ 0.31
CLP1-206ENST00000533905 CASKIN1Q8WXD9 1431 aa16.96■□□□□ 0.31
CLP1-206ENST00000533905 ATP10AO60312 1499 aa16.96■□□□□ 0.31
CLP1-206ENST00000533905 PREX2Q70Z35 1606 aa16.96■□□□□ 0.3
CLP1-206ENST00000533905 ABCC1P33527 1531 aa16.96■□□□□ 0.3
CLP1-206ENST00000533905 C9orf84Q5VXU9 1444 aa16.96■□□□□ 0.3
CLP1-206ENST00000533905 CEBPAP49715 358 aaPredicted RBP16.95■□□□□ 0.3
CLP1-206ENST00000533905 EFCAB2Q5VUJ9 269 aa16.94■□□□□ 0.3
CLP1-206ENST00000533905 ZNF518AQ6AHZ1 1483 aa16.93■□□□□ 0.3
CLP1-206ENST00000533905 ITSN2Q9NZM3 1697 aa16.92■□□□□ 0.3
CLP1-206ENST00000533905 CDC42BPAQ5VT25 1732 aa16.92■□□□□ 0.3
CLP1-206ENST00000533905 CLIP1P30622 1438 aa16.9■□□□□ 0.3
CLP1-206ENST00000533905 SAMD9LQ8IVG5 1584 aa16.89■□□□□ 0.3
CLP1-206ENST00000533905 FYCO1Q9BQS8 1478 aa16.89■□□□□ 0.29
CLP1-206ENST00000533905 CCDC18Q5T9S5 1454 aa16.88■□□□□ 0.29
CLP1-206ENST00000533905 KIDINS220Q9ULH0 1771 aa16.88■□□□□ 0.29
CLP1-206ENST00000533905 SYCP2Q9BX26 1530 aa16.86■□□□□ 0.29
CLP1-206ENST00000533905 CDK11AQ9UQ88 783 aaPredicted RBP16.86■□□□□ 0.29
CLP1-206ENST00000533905 MLH3Q9UHC1 1453 aa16.86■□□□□ 0.29
CLP1-206ENST00000533905 REREQ9P2R6 1566 aa16.85■□□□□ 0.29
CLP1-206ENST00000533905 GPATCH8Q9UKJ3 1502 aaKnown RBP16.85■□□□□ 0.29
CLP1-206ENST00000533905 FBXO41Q8TF61 875 aa16.84■□□□□ 0.29
CLP1-206ENST00000533905 C3P01024 1663 aa16.82■□□□□ 0.28
CLP1-206ENST00000533905 PREX1Q8TCU6 1659 aa16.82■□□□□ 0.28
CLP1-206ENST00000533905 STRCQ7RTU9 1775 aa16.82■□□□□ 0.28
CLP1-206ENST00000533905 ZNF777Q9ULD5 760 aaPredicted RBP16.79■□□□□ 0.28
CLP1-206ENST00000533905 AGLP35573 1532 aa16.79■□□□□ 0.28
CLP1-206ENST00000533905 HNRNPMP52272 730 aaKnown RBP eCLIP16.78■□□□□ 0.28
CLP1-206ENST00000533905 MYT1LQ9UL68 1186 aa16.78■□□□□ 0.28
CLP1-206ENST00000533905 TIAM1Q13009 1591 aa16.77■□□□□ 0.28
CLP1-206ENST00000533905 ZNF644Q9H582 1327 aaPredicted RBP16.77■□□□□ 0.28
CLP1-206ENST00000533905 INO80Q9ULG1 1556 aaPredicted RBP16.77■□□□□ 0.27
CLP1-206ENST00000533905 PLXNC1O60486 1568 aa16.74■□□□□ 0.27
CLP1-206ENST00000533905 ATP7AQ04656 1500 aa16.73■□□□□ 0.27
CLP1-206ENST00000533905 SUPT6HQ7KZ85 1726 aaKnown RBP16.73■□□□□ 0.27
CLP1-206ENST00000533905 CEP162Q5TB80 1403 aa16.72■□□□□ 0.27
CLP1-206ENST00000533905 UHRF1BP1Q6BDS2 1440 aa16.72■□□□□ 0.27
CLP1-206ENST00000533905 MBD5Q9P267 1494 aa16.7■□□□□ 0.26
CLP1-206ENST00000533905 CERKQ8TCT0 537 aa16.7■□□□□ 0.26
CLP1-206ENST00000533905 SPAG9O60271 1321 aaKnown RBP16.69■□□□□ 0.26
CLP1-206ENST00000533905 MTUS2Q5JR59 1369 aa16.68■□□□□ 0.26
CLP1-206ENST00000533905 CCNB3Q8WWL7 1395 aa16.68■□□□□ 0.26
CLP1-206ENST00000533905 EHBP1L1Q8N3D4 1523 aa16.68■□□□□ 0.26
CLP1-206ENST00000533905 CLTCQ00610 1675 aaKnown RBP16.68■□□□□ 0.26
CLP1-206ENST00000533905 KIAA1107Q9UPP5 1409 aa16.67■□□□□ 0.26
CLP1-206ENST00000533905 A2MP01023 1474 aa16.67■□□□□ 0.26
CLP1-206ENST00000533905 CFDP1Q9UEE9 299 aaPredicted RBP16.66■□□□□ 0.26
CLP1-206ENST00000533905 NCOA1Q15788 1441 aa16.64■□□□□ 0.25
CLP1-206ENST00000533905 LTBP4Q8N2S1 1624 aa16.64■□□□□ 0.25
CLP1-206ENST00000533905 MROH2AA6NES4 1674 aa16.64■□□□□ 0.25
CLP1-206ENST00000533905 LOC105371045A0A1W2PR82 267 aa16.63■□□□□ 0.25
CLP1-206ENST00000533905 ZMYM3Q14202 1370 aa16.63■□□□□ 0.25
CLP1-206ENST00000533905 MYO3AQ8NEV4 1616 aa16.63■□□□□ 0.25
CLP1-206ENST00000533905 ADGBQ8N7X0 1667 aa16.62■□□□□ 0.25
CLP1-206ENST00000533905 NCOA2Q15596 1464 aa16.62■□□□□ 0.25
CLP1-206ENST00000533905 CAMSAP1Q5T5Y3 1602 aa16.62■□□□□ 0.25
CLP1-206ENST00000533905 PTPRKQ15262 1439 aa16.62■□□□□ 0.25
CLP1-206ENST00000533905 CNTLNQ9NXG0 1405 aa16.61■□□□□ 0.25
CLP1-206ENST00000533905 CAMSAP2Q08AD1 1489 aa16.61■□□□□ 0.25
CLP1-206ENST00000533905 PLEKHH2Q8IVE3 1493 aa16.6■□□□□ 0.25
CLP1-206ENST00000533905 GGT6Q6P531 493 aa16.59■□□□□ 0.25
CLP1-206ENST00000533905 NCKAP5LQ9HCH0 1330 aa16.59■□□□□ 0.25
CLP1-206ENST00000533905 PTPRTO14522 1441 aa16.58■□□□□ 0.24
CLP1-206ENST00000533905 NPATQ14207 1427 aa16.58■□□□□ 0.24
CLP1-206ENST00000533905 ZNF142P52746 1687 aaPredicted RBP16.57■□□□□ 0.24
CLP1-206ENST00000533905 CEP170BQ9Y4F5 1589 aaPredicted RBP16.56■□□□□ 0.24
CLP1-206ENST00000533905 SETD1BQ9UPS6 1966 aaKnown RBP16.55■□□□□ 0.24
CLP1-206ENST00000533905 ESF1Q9H501 851 aaKnown RBP16.55■□□□□ 0.24
CLP1-206ENST00000533905 CCDC141Q6ZP82 1450 aa16.54■□□□□ 0.24
CLP1-206ENST00000533905 KANK4Q5T7N3 995 aaPredicted RBP16.54■□□□□ 0.24
CLP1-206ENST00000533905 ZNF335Q9H4Z2 1342 aaPredicted RBP16.53■□□□□ 0.24
CLP1-206ENST00000533905 FBXO31Q5XUX0 539 aaPredicted RBP16.53■□□□□ 0.24
CLP1-206ENST00000533905 DHX29Q7Z478 1369 aaKnown RBP16.52■□□□□ 0.24
CLP1-206ENST00000533905 TCOF1Q13428 1488 aaKnown RBP16.52■□□□□ 0.23
CLP1-206ENST00000533905 RTEL1-TNFRSF6BF6WH68 1400 aa16.52■□□□□ 0.23
CLP1-206ENST00000533905 LRRC9Q6ZRR7 1453 aa16.51■□□□□ 0.23
CLP1-206ENST00000533905 VPS8Q8N3P4 1428 aa16.51■□□□□ 0.23
CLP1-206ENST00000533905 DNMT1P26358 1616 aaKnown RBP16.5■□□□□ 0.23
CLP1-206ENST00000533905 NEURL4Q96JN8 1562 aa16.49■□□□□ 0.23
CLP1-206ENST00000533905 ARHGEF5Q12774 1597 aa16.47■□□□□ 0.23
CLP1-206ENST00000533905 KDM5DQ9BY66 1539 aa16.47■□□□□ 0.23
CLP1-206ENST00000533905 KIF3BO15066 747 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms