RNA–Protein interactions for RNA: ENST00000533898.5

RCN1-211, Transcript of reticulocalbin 1, humanhuman

TSL 2

Gene RCN1, Length 2,416 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCN1-211ENST00000533898 GOLGA3Q08378 1498 aa6.71□□□□□ -1.34
RCN1-211ENST00000533898 PLB1Q6P1J6 1458 aa6.7□□□□□ -1.34
RCN1-211ENST00000533898 TRIM26Q12899 539 aaPredicted RBP6.7□□□□□ -1.34
RCN1-211ENST00000533898 RNF25Q96BH1 459 aaPredicted RBP6.7□□□□□ -1.34
RCN1-211ENST00000533898 SAMD9Q5K651 1589 aa6.69□□□□□ -1.34
RCN1-211ENST00000533898 BRPF1P55201 1214 aaPredicted RBP6.68□□□□□ -1.34
RCN1-211ENST00000533898 ARHGAP35Q9NRY4 1499 aa6.68□□□□□ -1.34
RCN1-211ENST00000533898 PTPRGP23470 1445 aa6.68□□□□□ -1.34
RCN1-211ENST00000533898 TNIKQ9UKE5 1360 aa6.67□□□□□ -1.34
RCN1-211ENST00000533898 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.67□□□□□ -1.34
RCN1-211ENST00000533898 HNRNPUL2Q1KMD3 747 aaKnown RBP6.67□□□□□ -1.34
RCN1-211ENST00000533898 CIZ1Q9ULV3 898 aaPredicted RBP6.67□□□□□ -1.34
RCN1-211ENST00000533898 CARMIL2Q6F5E8 1435 aa6.66□□□□□ -1.34
RCN1-211ENST00000533898 RNF39Q9H2S5 420 aa6.66□□□□□ -1.34
RCN1-211ENST00000533898 ABCC2Q92887 1545 aa6.66□□□□□ -1.34
RCN1-211ENST00000533898 HRCP23327 699 aa6.64□□□□□ -1.35
RCN1-211ENST00000533898 POTEHQ6S545 545 aa6.64□□□□□ -1.35
RCN1-211ENST00000533898 ABCA8O94911 1581 aa6.64□□□□□ -1.35
RCN1-211ENST00000533898 UACAQ9BZF9 1416 aa6.63□□□□□ -1.35
RCN1-211ENST00000533898 C1QBPQ07021 282 aaKnown RBP6.63□□□□□ -1.35
RCN1-211ENST00000533898 CEP162Q5TB80 1403 aa6.63□□□□□ -1.35
RCN1-211ENST00000533898 NUP153P49790 1475 aaKnown RBP6.62□□□□□ -1.35
RCN1-211ENST00000533898 ZCCHC11Q5TAX3 1644 aaKnown RBP6.62□□□□□ -1.35
RCN1-211ENST00000533898 CDK13Q14004 1512 aaKnown RBP6.62□□□□□ -1.35
RCN1-211ENST00000533898 LRRIQ1Q96JM4 1722 aa6.62□□□□□ -1.35
RCN1-211ENST00000533898 CLIP1P30622 1438 aa6.61□□□□□ -1.35
RCN1-211ENST00000533898 PLCD3Q8N3E9 789 aa6.61□□□□□ -1.35
RCN1-211ENST00000533898 PCF11O94913 1555 aaKnown RBP6.61□□□□□ -1.35
RCN1-211ENST00000533898 GTPBP6O43824 516 aaPredicted RBP6.61□□□□□ -1.35
RCN1-211ENST00000533898 POLA2Q14181 598 aa6.61□□□□□ -1.35
RCN1-211ENST00000533898 EFCAB5A4FU69 1503 aa6.6□□□□□ -1.35
RCN1-211ENST00000533898 KDM5BQ9UGL1 1544 aa6.6□□□□□ -1.35
RCN1-211ENST00000533898 KIF13AQ9H1H9 1805 aa6.6□□□□□ -1.35
RCN1-211ENST00000533898 RAPGEF6Q8TEU7 1601 aa6.6□□□□□ -1.35
RCN1-211ENST00000533898 ASXL2Q76L83 1435 aa6.6□□□□□ -1.35
RCN1-211ENST00000533898 ATP10BO94823 1461 aa6.6□□□□□ -1.35
RCN1-211ENST00000533898 HS6ST3Q8IZP7 471 aa6.6□□□□□ -1.35
RCN1-211ENST00000533898 SPINK5Q9NQ38 1064 aaPredicted RBP6.6□□□□□ -1.35
RCN1-211ENST00000533898 UHRF1BP1LA0JNW5 1464 aa6.59□□□□□ -1.35
RCN1-211ENST00000533898 ERICH6Q7L0X2 663 aa6.59□□□□□ -1.35
RCN1-211ENST00000533898 DIP2BQ9P265 1576 aa6.59□□□□□ -1.35
RCN1-211ENST00000533898 ATP1B4Q9UN42 357 aaPredicted RBP6.59□□□□□ -1.35
RCN1-211ENST00000533898 MAPKBP1O60336 1514 aa6.58□□□□□ -1.36
RCN1-211ENST00000533898 LMOD2Q6P5Q4 547 aa6.58□□□□□ -1.36
RCN1-211ENST00000533898 MAGI3Q5TCQ9 1506 aa6.58□□□□□ -1.36
RCN1-211ENST00000533898 ARID3AQ99856 593 aa6.57□□□□□ -1.36
RCN1-211ENST00000533898 FAM69CQ0P6D2 419 aa6.57□□□□□ -1.36
RCN1-211ENST00000533898 KCNH8Q96L42 1107 aa6.57□□□□□ -1.36
RCN1-211ENST00000533898 ABCC10Q5T3U5 1492 aa6.56□□□□□ -1.36
RCN1-211ENST00000533898 NPM2Q86SE8 214 aaKnown RBP6.56□□□□□ -1.36
RCN1-211ENST00000533898 TSPOAP1O95153 1857 aa6.56□□□□□ -1.36
RCN1-211ENST00000533898 MIER1Q8N108 512 aa6.56□□□□□ -1.36
RCN1-211ENST00000533898 KCNV2Q8TDN2 545 aa6.56□□□□□ -1.36
RCN1-211ENST00000533898 EPRSP07814 1512 aaKnown RBP6.55□□□□□ -1.36
RCN1-211ENST00000533898 PPRC1Q5VV67 1664 aaKnown RBP6.55□□□□□ -1.36
RCN1-211ENST00000533898 NEUROD2Q15784 382 aa6.55□□□□□ -1.36
RCN1-211ENST00000533898 WDR7Q9Y4E6 1490 aa6.55□□□□□ -1.36
RCN1-211ENST00000533898 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.55□□□□□ -1.36
RCN1-211ENST00000533898 KIF14Q15058 1648 aa6.54□□□□□ -1.36
RCN1-211ENST00000533898 FMN1Q68DA7 1419 aa6.53□□□□□ -1.36
RCN1-211ENST00000533898 TTC37Q6PGP7 1564 aa6.53□□□□□ -1.36
RCN1-211ENST00000533898 CASKIN1Q8WXD9 1431 aa6.53□□□□□ -1.36
RCN1-211ENST00000533898 COL17A1Q9UMD9 1497 aaPredicted RBP6.53□□□□□ -1.36
RCN1-211ENST00000533898 HECW1Q76N89 1606 aa6.53□□□□□ -1.36
RCN1-211ENST00000533898 SLC24A3Q9HC58 644 aa6.52□□□□□ -1.36
RCN1-211ENST00000533898 C1orf115Q9H7X2 142 aa6.52□□□□□ -1.37
RCN1-211ENST00000533898 FYCO1Q9BQS8 1478 aa6.51□□□□□ -1.37
RCN1-211ENST00000533898 MAP3K4Q9Y6R4 1608 aa6.51□□□□□ -1.37
RCN1-211ENST00000533898 PPARGC1BQ86YN6 1023 aaKnown RBP6.51□□□□□ -1.37
RCN1-211ENST00000533898 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP6.51□□□□□ -1.37
RCN1-211ENST00000533898 KANK4Q5T7N3 995 aaPredicted RBP6.5□□□□□ -1.37
RCN1-211ENST00000533898 CADPS2Q86UW7 1296 aa6.5□□□□□ -1.37
RCN1-211ENST00000533898 VPS8Q8N3P4 1428 aa6.5□□□□□ -1.37
RCN1-211ENST00000533898 STK25O00506 426 aa6.49□□□□□ -1.37
RCN1-211ENST00000533898 GLI2P10070 1586 aa6.49□□□□□ -1.37
RCN1-211ENST00000533898 CD109Q6YHK3 1445 aa6.48□□□□□ -1.37
RCN1-211ENST00000533898 ABCA9Q8IUA7 1624 aa6.48□□□□□ -1.37
RCN1-211ENST00000533898 ABCB7O75027 752 aa6.48□□□□□ -1.37
RCN1-211ENST00000533898 TROQ12816 1431 aaPredicted RBP6.47□□□□□ -1.37
RCN1-211ENST00000533898 TIAM1Q13009 1591 aa6.47□□□□□ -1.37
RCN1-211ENST00000533898 PLEKHD1A6NEE1 506 aa6.47□□□□□ -1.37
RCN1-211ENST00000533898 ZC3H15Q8WU90 426 aaKnown RBP6.47□□□□□ -1.37
RCN1-211ENST00000533898 CFAP43Q8NDM7 1665 aa6.46□□□□□ -1.37
RCN1-211ENST00000533898 GPBP1L1Q9HC44 474 aaPredicted RBP6.46□□□□□ -1.38
RCN1-211ENST00000533898 RAPGEF3O95398 923 aa6.46□□□□□ -1.38
RCN1-211ENST00000533898 ZNF644Q9H582 1327 aaPredicted RBP6.46□□□□□ -1.38
RCN1-211ENST00000533898 CCDC18Q5T9S5 1454 aa6.45□□□□□ -1.38
RCN1-211ENST00000533898 FRMPD1Q5SYB0 1578 aa6.45□□□□□ -1.38
RCN1-211ENST00000533898 KDM6BO15054 1643 aa6.44□□□□□ -1.38
RCN1-211ENST00000533898 ARHGEF12Q9NZN5 1544 aa6.44□□□□□ -1.38
RCN1-211ENST00000533898 CDC42BPAQ5VT25 1732 aa6.44□□□□□ -1.38
RCN1-211ENST00000533898 CDC42BPBQ9Y5S2 1711 aa6.44□□□□□ -1.38
RCN1-211ENST00000533898 MTUS2Q5JR59 1369 aa6.44□□□□□ -1.38
RCN1-211ENST00000533898 LRRC9Q6ZRR7 1453 aa6.44□□□□□ -1.38
RCN1-211ENST00000533898 FANCAO15360 1455 aa6.43□□□□□ -1.38
RCN1-211ENST00000533898 ZNF692Q9BU19 519 aaPredicted RBP6.43□□□□□ -1.38
RCN1-211ENST00000533898 NCOA2Q15596 1464 aa6.43□□□□□ -1.38
RCN1-211ENST00000533898 GPATCH8Q9UKJ3 1502 aaKnown RBP6.42□□□□□ -1.38
RCN1-211ENST00000533898 PHLDB1Q86UU1 1377 aa6.42□□□□□ -1.38
RCN1-211ENST00000533898 SIGLEC1Q9BZZ2 1709 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms