RNA–Protein interactions for RNA: ENST00000533889.1

CAPN5-207, Transcript of calpain 5, humanhuman

TSL 3

Gene CAPN5, Length 542 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN5-207ENST00000533889 HECW2Q9P2P5 1572 aa28.38■■■□□ 2.13
CAPN5-207ENST00000533889 POGZQ7Z3K3 1410 aa28.37■■■□□ 2.13
CAPN5-207ENST00000533889 ARHGAP5Q13017 1502 aa28.37■■■□□ 2.13
CAPN5-207ENST00000533889 ZFYVE16Q7Z3T8 1539 aa28.37■■■□□ 2.13
CAPN5-207ENST00000533889 MAGI2Q86UL8 1455 aa28.36■■■□□ 2.13
CAPN5-207ENST00000533889 BCORL1Q5H9F3 1711 aa28.36■■■□□ 2.13
CAPN5-207ENST00000533889 YEATS2Q9ULM3 1422 aa28.35■■■□□ 2.13
CAPN5-207ENST00000533889 FYCO1Q9BQS8 1478 aa28.35■■■□□ 2.13
CAPN5-207ENST00000533889 PTPRMP28827 1452 aa28.34■■■□□ 2.13
CAPN5-207ENST00000533889 MADDQ8WXG6 1647 aa28.29■■■□□ 2.12
CAPN5-207ENST00000533889 AFAP1Q8N556 730 aa28.27■■■□□ 2.12
CAPN5-207ENST00000533889 MYT1LQ9UL68 1186 aa28.27■■■□□ 2.12
CAPN5-207ENST00000533889 MLECQ14165 292 aa28.26■■■□□ 2.11
CAPN5-207ENST00000533889 CDC42BPBQ9Y5S2 1711 aa28.26■■■□□ 2.11
CAPN5-207ENST00000533889 ZNF518AQ6AHZ1 1483 aa28.25■■■□□ 2.11
CAPN5-207ENST00000533889 ATP10AO60312 1499 aa28.23■■■□□ 2.11
CAPN5-207ENST00000533889 PREX2Q70Z35 1606 aa28.21■■■□□ 2.11
CAPN5-207ENST00000533889 PLPPR3Q6T4P5 718 aa28.21■■■□□ 2.11
CAPN5-207ENST00000533889 RIMS1Q86UR5 1692 aaKnown RBP28.21■■■□□ 2.11
CAPN5-207ENST00000533889 SIGLEC1Q9BZZ2 1709 aa28.21■■■□□ 2.11
CAPN5-207ENST00000533889 C9orf84Q5VXU9 1444 aa28.18■■■□□ 2.1
CAPN5-207ENST00000533889 ZNF777Q9ULD5 760 aaPredicted RBP28.17■■■□□ 2.1
CAPN5-207ENST00000533889 KDM5CP41229 1560 aa28.16■■■□□ 2.1
CAPN5-207ENST00000533889 CDC42BPAQ5VT25 1732 aa28.15■■■□□ 2.1
CAPN5-207ENST00000533889 CEP162Q5TB80 1403 aa28.15■■■□□ 2.1
CAPN5-207ENST00000533889 TRAPPC8Q9Y2L5 1435 aa28.13■■■□□ 2.09
CAPN5-207ENST00000533889 ABCC1P33527 1531 aa28.13■■■□□ 2.09
CAPN5-207ENST00000533889 ARHGEF12Q9NZN5 1544 aa28.13■■■□□ 2.09
CAPN5-207ENST00000533889 MTUS2Q5JR59 1369 aa28.12■■■□□ 2.09
CAPN5-207ENST00000533889 GPATCH8Q9UKJ3 1502 aaKnown RBP28.1■■■□□ 2.09
CAPN5-207ENST00000533889 MLH3Q9UHC1 1453 aa28.09■■■□□ 2.09
CAPN5-207ENST00000533889 ITSN2Q9NZM3 1697 aa28.09■■■□□ 2.09
CAPN5-207ENST00000533889 CFDP1Q9UEE9 299 aaPredicted RBP28.08■■■□□ 2.09
CAPN5-207ENST00000533889 FER1L4A9Z1Z3 1794 aa28.08■■■□□ 2.09
CAPN5-207ENST00000533889 CCNB3Q8WWL7 1395 aa28.08■■■□□ 2.09
CAPN5-207ENST00000533889 DIP2CQ9Y2E4 1556 aa28.06■■■□□ 2.08
CAPN5-207ENST00000533889 LOC105371045A0A1W2PR82 267 aa28.05■■■□□ 2.08
CAPN5-207ENST00000533889 HNRNPMP52272 730 aaKnown RBP eCLIP28.04■■■□□ 2.08
CAPN5-207ENST00000533889 SAMD9LQ8IVG5 1584 aa28.03■■■□□ 2.08
CAPN5-207ENST00000533889 LMTK3Q96Q04 1460 aa28.02■■■□□ 2.08
CAPN5-207ENST00000533889 ABCA6Q8N139 1617 aa28.02■■■□□ 2.08
CAPN5-207ENST00000533889 SYCP2Q9BX26 1530 aa27.99■■■□□ 2.07
CAPN5-207ENST00000533889 ILDR1Q86SU0 546 aaPredicted RBP27.99■■■□□ 2.07
CAPN5-207ENST00000533889 REREQ9P2R6 1566 aa27.99■■■□□ 2.07
CAPN5-207ENST00000533889 SPAG9O60271 1321 aaKnown RBP27.98■■■□□ 2.07
CAPN5-207ENST00000533889 KIDINS220Q9ULH0 1771 aa27.97■■■□□ 2.07
CAPN5-207ENST00000533889 CEBPAP49715 358 aaPredicted RBP27.97■■■□□ 2.07
CAPN5-207ENST00000533889 HSPA2P54652 639 aa27.97■■■□□ 2.07
CAPN5-207ENST00000533889 EHBP1L1Q8N3D4 1523 aa27.97■■■□□ 2.07
CAPN5-207ENST00000533889 PLEKHH2Q8IVE3 1493 aa27.96■■■□□ 2.07
CAPN5-207ENST00000533889 ESF1Q9H501 851 aaKnown RBP27.96■■■□□ 2.07
CAPN5-207ENST00000533889 KIAA1107Q9UPP5 1409 aa27.95■■■□□ 2.07
CAPN5-207ENST00000533889 AGLP35573 1532 aa27.92■■■□□ 2.06
CAPN5-207ENST00000533889 TIAM1Q13009 1591 aa27.9■■■□□ 2.06
CAPN5-207ENST00000533889 ZNF644Q9H582 1327 aaPredicted RBP27.9■■■□□ 2.06
CAPN5-207ENST00000533889 ATP7AQ04656 1500 aa27.85■■■□□ 2.05
CAPN5-207ENST00000533889 VPS8Q8N3P4 1428 aa27.84■■■□□ 2.05
CAPN5-207ENST00000533889 NCOA2Q15596 1464 aa27.83■■■□□ 2.04
CAPN5-207ENST00000533889 SUPT6HQ7KZ85 1726 aaKnown RBP27.82■■■□□ 2.04
CAPN5-207ENST00000533889 PREX1Q8TCU6 1659 aa27.81■■■□□ 2.04
CAPN5-207ENST00000533889 INO80Q9ULG1 1556 aaPredicted RBP27.8■■■□□ 2.04
CAPN5-207ENST00000533889 A2MP01023 1474 aa27.78■■■□□ 2.04
CAPN5-207ENST00000533889 C3P01024 1663 aa27.78■■■□□ 2.04
CAPN5-207ENST00000533889 MBD5Q9P267 1494 aa27.77■■■□□ 2.04
CAPN5-207ENST00000533889 CNTLNQ9NXG0 1405 aa27.77■■■□□ 2.04
CAPN5-207ENST00000533889 SETD1BQ9UPS6 1966 aaKnown RBP27.77■■■□□ 2.04
CAPN5-207ENST00000533889 UHRF1BP1Q6BDS2 1440 aa27.76■■■□□ 2.04
CAPN5-207ENST00000533889 LRRC9Q6ZRR7 1453 aa27.73■■■□□ 2.03
CAPN5-207ENST00000533889 GGT6Q6P531 493 aa27.73■■■□□ 2.03
CAPN5-207ENST00000533889 PLXNC1O60486 1568 aa27.71■■■□□ 2.03
CAPN5-207ENST00000533889 RSPH4AQ5TD94 716 aa27.71■■■□□ 2.03
CAPN5-207ENST00000533889 CAMSAP2Q08AD1 1489 aa27.7■■■□□ 2.03
CAPN5-207ENST00000533889 RTEL1-TNFRSF6BF6WH68 1400 aa27.7■■■□□ 2.03
CAPN5-207ENST00000533889 ADGBQ8N7X0 1667 aa27.7■■■□□ 2.02
CAPN5-207ENST00000533889 ZMYM3Q14202 1370 aa27.69■■■□□ 2.02
CAPN5-207ENST00000533889 KANK4Q5T7N3 995 aaPredicted RBP27.68■■■□□ 2.02
CAPN5-207ENST00000533889 FBXO41Q8TF61 875 aa27.68■■■□□ 2.02
CAPN5-207ENST00000533889 CCDC141Q6ZP82 1450 aa27.68■■■□□ 2.02
CAPN5-207ENST00000533889 MAP3K1Q13233 1512 aa27.65■■■□□ 2.02
CAPN5-207ENST00000533889 MROH2AA6NES4 1674 aa27.65■■■□□ 2.02
CAPN5-207ENST00000533889 DHX29Q7Z478 1369 aaKnown RBP27.64■■■□□ 2.02
CAPN5-207ENST00000533889 TSPY4P0CV99 314 aa27.64■■■□□ 2.02
CAPN5-207ENST00000533889 TSPY10P0CW01 314 aa27.64■■■□□ 2.02
CAPN5-207ENST00000533889 DMRT2Q9Y5R5 561 aa27.64■■■□□ 2.02
CAPN5-207ENST00000533889 CLTCQ00610 1675 aaKnown RBP27.63■■■□□ 2.01
CAPN5-207ENST00000533889 APLP2Q06481 763 aa27.63■■■□□ 2.01
CAPN5-207ENST00000533889 PPP6R1Q9UPN7 881 aa27.63■■■□□ 2.01
CAPN5-207ENST00000533889 NPATQ14207 1427 aa27.6■■■□□ 2.01
CAPN5-207ENST00000533889 KIF3BO15066 747 aa27.59■■■□□ 2.01
CAPN5-207ENST00000533889 STRCQ7RTU9 1775 aa27.58■■■□□ 2
CAPN5-207ENST00000533889 ARHGEF5Q12774 1597 aa27.57■■■□□ 2
CAPN5-207ENST00000533889 MYOM3Q5VTT5 1437 aa27.54■■■□□ 2
CAPN5-207ENST00000533889 CERKQ8TCT0 537 aa27.54■■■□□ 2
CAPN5-207ENST00000533889 MIA2Q96PC5 1412 aa27.52■■■□□ 2
CAPN5-207ENST00000533889 PTPRKQ15262 1439 aa27.51■■□□□ 1.99
CAPN5-207ENST00000533889 WASHC2CQ9Y4E1 1318 aa27.48■■□□□ 1.99
CAPN5-207ENST00000533889 PTPRTO14522 1441 aa27.46■■□□□ 1.99
CAPN5-207ENST00000533889 NCOA1Q15788 1441 aa27.46■■□□□ 1.99
CAPN5-207ENST00000533889 CAMSAP1Q5T5Y3 1602 aa27.45■■□□□ 1.98
CAPN5-207ENST00000533889 MYO3AQ8NEV4 1616 aa27.43■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms