RNA–Protein interactions for RNA: ENST00000533455.5

CTSB-228, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSB, Length 2,009 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-228ENST00000533455 CCDC7Q96M83 1385 aa23.02■■□□□ 1.28
CTSB-228ENST00000533455 DAPK1P53355 1430 aa23.01■■□□□ 1.27
CTSB-228ENST00000533455 L3MBTL2Q969R5 705 aa23.01■■□□□ 1.27
CTSB-228ENST00000533455 ANKRD30BQ9BXX2 1392 aa23■■□□□ 1.27
CTSB-228ENST00000533455 ABCC5O15440 1437 aa22.95■■□□□ 1.26
CTSB-228ENST00000533455 PRKRIP1Q9H875 184 aaPredicted RBP22.95■■□□□ 1.26
CTSB-228ENST00000533455 KIAA0556O60303 1618 aa22.95■■□□□ 1.26
CTSB-228ENST00000533455 SPATA31E1Q6ZUB1 1445 aa22.95■■□□□ 1.26
CTSB-228ENST00000533455 C11orf95C9JLR9 678 aaPredicted RBP22.92■■□□□ 1.26
CTSB-228ENST00000533455 FANCIQ9NVI1 1328 aa22.92■■□□□ 1.26
CTSB-228ENST00000533455 CCDC184Q52MB2 194 aa22.91■■□□□ 1.26
CTSB-228ENST00000533455 RAPGEF6Q8TEU7 1601 aa22.9■■□□□ 1.26
CTSB-228ENST00000533455 CDK11AQ9UQ88 783 aaPredicted RBP22.9■■□□□ 1.26
CTSB-228ENST00000533455 ADGBQ8N7X0 1667 aa22.89■■□□□ 1.26
CTSB-228ENST00000533455 NBPF8Q3BBV2 869 aa22.89■■□□□ 1.26
CTSB-228ENST00000533455 ZBED9Q6R2W3 1325 aa22.89■■□□□ 1.25
CTSB-228ENST00000533455 NUP153P49790 1475 aaKnown RBP22.89■■□□□ 1.25
CTSB-228ENST00000533455 DISP1Q96F81 1524 aa22.88■■□□□ 1.25
CTSB-228ENST00000533455 FOXD1Q16676 465 aa22.88■■□□□ 1.25
CTSB-228ENST00000533455 MRC2Q9UBG0 1479 aa22.88■■□□□ 1.25
CTSB-228ENST00000533455 PPP4R2Q9NY27 417 aa22.87■■□□□ 1.25
CTSB-228ENST00000533455 KIAA0586Q9BVV6 1533 aa22.87■■□□□ 1.25
CTSB-228ENST00000533455 IRX6P78412 446 aaPredicted RBP22.86■■□□□ 1.25
CTSB-228ENST00000533455 MBD5Q9P267 1494 aa22.85■■□□□ 1.25
CTSB-228ENST00000533455 ITSN2Q9NZM3 1697 aa22.85■■□□□ 1.25
CTSB-228ENST00000533455 KIF7Q2M1P5 1343 aa22.85■■□□□ 1.25
CTSB-228ENST00000533455 MSH5O43196 834 aa22.84■■□□□ 1.25
CTSB-228ENST00000533455 PZPP20742 1482 aa22.84■■□□□ 1.25
CTSB-228ENST00000533455 MRS2Q9HD23 443 aa22.83■■□□□ 1.25
CTSB-228ENST00000533455 CROCC2H7BZ55 1655 aa22.83■■□□□ 1.24
CTSB-228ENST00000533455 ERCC6Q03468 1493 aa22.82■■□□□ 1.24
CTSB-228ENST00000533455 ADCY10Q96PN6 1610 aa22.8■■□□□ 1.24
CTSB-228ENST00000533455 IFT140Q96RY7 1462 aa22.8■■□□□ 1.24
CTSB-228ENST00000533455 KIF14Q15058 1648 aa22.79■■□□□ 1.24
CTSB-228ENST00000533455 ADGRL2O95490 1459 aa22.79■■□□□ 1.24
CTSB-228ENST00000533455 SLC4A1APQ9BWU0 796 aaKnown RBP22.79■■□□□ 1.24
CTSB-228ENST00000533455 CAMSAP2Q08AD1 1489 aa22.79■■□□□ 1.24
CTSB-228ENST00000533455 FAM9BQ8IZU0 186 aa22.79■■□□□ 1.24
CTSB-228ENST00000533455 ARID3CA6NKF2 412 aa22.77■■□□□ 1.24
CTSB-228ENST00000533455 ZNF644Q9H582 1327 aaPredicted RBP22.77■■□□□ 1.24
CTSB-228ENST00000533455 TROQ12816 1431 aaPredicted RBP22.77■■□□□ 1.23
CTSB-228ENST00000533455 BCORL1Q5H9F3 1711 aa22.75■■□□□ 1.23
CTSB-228ENST00000533455 KIAA1107Q9UPP5 1409 aa22.74■■□□□ 1.23
CTSB-228ENST00000533455 DHX29Q7Z478 1369 aaKnown RBP22.74■■□□□ 1.23
CTSB-228ENST00000533455 KDM5CP41229 1560 aa22.73■■□□□ 1.23
CTSB-228ENST00000533455 ZNF608Q9ULD9 1512 aaPredicted RBP22.73■■□□□ 1.23
CTSB-228ENST00000533455 GRIN2AQ12879 1464 aa22.73■■□□□ 1.23
CTSB-228ENST00000533455 SMG6Q86US8 1419 aaKnown RBP22.71■■□□□ 1.23
CTSB-228ENST00000533455 GPATCH8Q9UKJ3 1502 aaKnown RBP22.7■■□□□ 1.22
CTSB-228ENST00000533455 ARID4BQ4LE39 1312 aaPredicted RBP22.7■■□□□ 1.22
CTSB-228ENST00000533455 PRG4Q92954 1404 aaPredicted RBP22.69■■□□□ 1.22
CTSB-228ENST00000533455 USP47Q96K76 1375 aa22.67■■□□□ 1.22
CTSB-228ENST00000533455 EIF4G3O43432 1585 aaKnown RBP22.67■■□□□ 1.22
CTSB-228ENST00000533455 UHRF1BP1Q6BDS2 1440 aa22.66■■□□□ 1.22
CTSB-228ENST00000533455 RALGAPBQ86X10 1494 aa22.64■■□□□ 1.22
CTSB-228ENST00000533455 ARHGEF12Q9NZN5 1544 aa22.63■■□□□ 1.21
CTSB-228ENST00000533455 CFDP1Q9UEE9 299 aaPredicted RBP22.63■■□□□ 1.21
CTSB-228ENST00000533455 ANKRD30AQ9BXX3 1397 aa22.62■■□□□ 1.21
CTSB-228ENST00000533455 RNF123Q5XPI4 1314 aa22.62■■□□□ 1.21
CTSB-228ENST00000533455 B4GALNT3Q6L9W6 998 aa22.62■■□□□ 1.21
CTSB-228ENST00000533455 BCL11AQ9H165 835 aa22.62■■□□□ 1.21
CTSB-228ENST00000533455 KDM5DQ9BY66 1539 aa22.61■■□□□ 1.21
CTSB-228ENST00000533455 SHANK2Q9UPX8 1470 aa22.61■■□□□ 1.21
CTSB-228ENST00000533455 CDC42BPAQ5VT25 1732 aa22.61■■□□□ 1.21
CTSB-228ENST00000533455 ROCK2O75116 1388 aaKnown RBP22.61■■□□□ 1.21
CTSB-228ENST00000533455 ERICH6Q7L0X2 663 aa22.6■■□□□ 1.21
CTSB-228ENST00000533455 NUDCQ9Y266 331 aa22.59■■□□□ 1.21
CTSB-228ENST00000533455 CEP170Q5SW79 1584 aa22.59■■□□□ 1.21
CTSB-228ENST00000533455 PLB1Q6P1J6 1458 aa22.59■■□□□ 1.21
CTSB-228ENST00000533455 MAGI1Q96QZ7 1491 aaPredicted RBP22.58■■□□□ 1.21
CTSB-228ENST00000533455 ANKRD50Q9ULJ7 1429 aa22.58■■□□□ 1.21
CTSB-228ENST00000533455 PKD2Q13563 968 aa22.57■■□□□ 1.2
CTSB-228ENST00000533455 E9PCH4 1651 aa22.55■■□□□ 1.2
CTSB-228ENST00000533455 ABCC10Q5T3U5 1492 aa22.53■■□□□ 1.2
CTSB-228ENST00000533455 SYNJ2O15056 1496 aa22.52■■□□□ 1.19
CTSB-228ENST00000533455 MYT1LQ9UL68 1186 aa22.5■■□□□ 1.19
CTSB-228ENST00000533455 ABCA8O94911 1581 aa22.5■■□□□ 1.19
CTSB-228ENST00000533455 PNISRQ8TF01 805 aaKnown RBP22.5■■□□□ 1.19
CTSB-228ENST00000533455 KTN1Q86UP2 1357 aaKnown RBP22.5■■□□□ 1.19
CTSB-228ENST00000533455 KIF15Q9NS87 1388 aa22.5■■□□□ 1.19
CTSB-228ENST00000533455 C9orf84Q5VXU9 1444 aa22.49■■□□□ 1.19
CTSB-228ENST00000533455 CARMIL2Q6F5E8 1435 aa22.49■■□□□ 1.19
CTSB-228ENST00000533455 PTPRGP23470 1445 aa22.49■■□□□ 1.19
CTSB-228ENST00000533455 LRPPRCP42704 1394 aaKnown RBP22.48■■□□□ 1.19
CTSB-228ENST00000533455 ZNF326Q5BKZ1 582 aaKnown RBP22.48■■□□□ 1.19
CTSB-228ENST00000533455 ZNF777Q9ULD5 760 aaPredicted RBP22.48■■□□□ 1.19
CTSB-228ENST00000533455 ARHGEF5Q12774 1597 aa22.47■■□□□ 1.19
CTSB-228ENST00000533455 NUP160Q12769 1436 aa22.46■■□□□ 1.19
CTSB-228ENST00000533455 NUP155O75694 1391 aa22.45■■□□□ 1.19
CTSB-228ENST00000533455 BRD4O60885 1362 aaPredicted RBP22.45■■□□□ 1.18
CTSB-228ENST00000533455 POLR3GLQ9BT43 218 aa22.44■■□□□ 1.18
CTSB-228ENST00000533455 CARD11Q9BXL7 1154 aa22.43■■□□□ 1.18
CTSB-228ENST00000533455 TMC1Q8TDI8 760 aa22.41■■□□□ 1.18
CTSB-228ENST00000533455 CCDC136Q96JN2 1154 aa22.4■■□□□ 1.18
CTSB-228ENST00000533455 MYBBP1AQ9BQG0 1328 aaKnown RBP22.4■■□□□ 1.18
CTSB-228ENST00000533455 RALBP1Q15311 655 aa22.4■■□□□ 1.18
CTSB-228ENST00000533455 ATP10BO94823 1461 aa22.39■■□□□ 1.17
CTSB-228ENST00000533455 TRPM1Q7Z4N2 1603 aa22.39■■□□□ 1.17
CTSB-228ENST00000533455 CHMP7Q8WUX9 453 aaPredicted RBP22.38■■□□□ 1.17
CTSB-228ENST00000533455 NOP58Q9Y2X3 529 aaKnown RBP22.38■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 95 ms