RNA–Protein interactions for RNA: ENST00000533350.1

PICALM-221, Transcript of phosphatidylinositol binding clathrin assembly protein, humanhuman

TSL 3

Gene PICALM, Length 541 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PICALM-221ENST00000533350 POTEB3A0JP26 581 aa10.48□□□□□ -0.73
PICALM-221ENST00000533350 POTEBQ6S5H4 581 aa10.48□□□□□ -0.73
PICALM-221ENST00000533350 HS3ST6Q96QI5 342 aa10.47□□□□□ -0.73
PICALM-221ENST00000533350 KDM2AQ9Y2K7 1162 aa10.46□□□□□ -0.73
PICALM-221ENST00000533350 FAM205CA6NFA0 338 aa10.45□□□□□ -0.74
PICALM-221ENST00000533350 C3orf67Q6ZVT6 689 aa10.43□□□□□ -0.74
PICALM-221ENST00000533350 EFCAB3Q8N7B9 438 aa10.43□□□□□ -0.74
PICALM-221ENST00000533350 BCANQ96GW7 911 aa10.43□□□□□ -0.74
PICALM-221ENST00000533350 PDCD7Q8N8D1 485 aaKnown RBP10.42□□□□□ -0.74
PICALM-221ENST00000533350 L3MBTL3Q96JM7 780 aaPredicted RBP10.42□□□□□ -0.74
PICALM-221ENST00000533350 NLRP6P59044 892 aa10.41□□□□□ -0.74
PICALM-221ENST00000533350 SOX12O15370 315 aa10.4□□□□□ -0.74
PICALM-221ENST00000533350 MKRN3Q13064 507 aaKnown RBP10.4□□□□□ -0.74
PICALM-221ENST00000533350 MFRPQ9BY79 579 aa10.38□□□□□ -0.75
PICALM-221ENST00000533350 PHF8Q9UPP1 1060 aa10.37□□□□□ -0.75
PICALM-221ENST00000533350 WDR70Q9NW82 654 aa10.34□□□□□ -0.75
PICALM-221ENST00000533350 NBR1Q14596 966 aa10.32□□□□□ -0.76
PICALM-221ENST00000533350 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.31□□□□□ -0.764e-13■□□□□ 9.6
PICALM-221ENST00000533350 FBXO22Q8NEZ5 403 aa10.28□□□□□ -0.76
PICALM-221ENST00000533350 PPP1R37O75864 691 aa10.26□□□□□ -0.77
PICALM-221ENST00000533350 HOXB3P14651 431 aaPredicted RBP10.25□□□□□ -0.77
PICALM-221ENST00000533350 RNF166Q96A37 237 aaPredicted RBP10.25□□□□□ -0.77
PICALM-221ENST00000533350 HOXB1P14653 301 aaPredicted RBP10.24□□□□□ -0.77
PICALM-221ENST00000533350 ILDR1Q86SU0 546 aaPredicted RBP10.24□□□□□ -0.77
PICALM-221ENST00000533350 CADPS2Q86UW7 1296 aa10.22□□□□□ -0.77
PICALM-221ENST00000533350 P3H3Q8IVL6 736 aa10.22□□□□□ -0.77
PICALM-221ENST00000533350 ERBB3P21860 1342 aa10.22□□□□□ -0.77
PICALM-221ENST00000533350 DPY19L2Q6NUT2 758 aa10.21□□□□□ -0.77
PICALM-221ENST00000533350 ZNF710Q8N1W2 664 aa10.21□□□□□ -0.77
PICALM-221ENST00000533350 G3V3G9 751 aa10.2□□□□□ -0.78
PICALM-221ENST00000533350 MS4A4AQ96JQ5 239 aa10.2□□□□□ -0.78
PICALM-221ENST00000533350 MYT1LQ9UL68 1186 aa10.17□□□□□ -0.78
PICALM-221ENST00000533350 BOLA1Q9Y3E2 137 aa10.17□□□□□ -0.78
PICALM-221ENST00000533350 PDE4AP27815 886 aa10.16□□□□□ -0.78
PICALM-221ENST00000533350 DOK7Q18PE1 504 aa10.16□□□□□ -0.78
PICALM-221ENST00000533350 LARP6Q9BRS8 491 aaKnown RBP10.13□□□□□ -0.79
PICALM-221ENST00000533350 VARS2Q5ST30 1063 aaKnown RBP10.12□□□□□ -0.79
PICALM-221ENST00000533350 RIMBP2O15034 1052 aa10.09□□□□□ -0.79
PICALM-221ENST00000533350 E2F4Q16254 413 aa10.09□□□□□ -0.79
PICALM-221ENST00000533350 ZNF687Q8N1G0 1237 aa10.09□□□□□ -0.79
PICALM-221ENST00000533350 KCNV2Q8TDN2 545 aa10.09□□□□□ -0.79
PICALM-221ENST00000533350 DDX27Q96GQ7 796 aaKnown RBP10.09□□□□□ -0.79
PICALM-221ENST00000533350 TPRNQ4KMQ1 711 aa10.07□□□□□ -0.8
PICALM-221ENST00000533350 PTGER2P43116 358 aa10.06□□□□□ -0.8
PICALM-221ENST00000533350 TMC2Q8TDI7 906 aa10.06□□□□□ -0.8
PICALM-221ENST00000533350 NCKAP5LQ9HCH0 1330 aa10.06□□□□□ -0.8
PICALM-221ENST00000533350 TULP1O00294 542 aaPredicted RBP10.05□□□□□ -0.8
PICALM-221ENST00000533350 MICALL2Q8IY33 904 aa10.05□□□□□ -0.8
PICALM-221ENST00000533350 CRISPLD2Q9H0B8 497 aa10.04□□□□□ -0.8
PICALM-221ENST00000533350 ZSWIM6Q9HCJ5 1215 aa10.03□□□□□ -0.8
PICALM-221ENST00000533350 PRKCSHP14314 528 aaPredicted RBP10.02□□□□□ -0.81
PICALM-221ENST00000533350 ARHGEF1Q92888 912 aaKnown RBP10.01□□□□□ -0.81
PICALM-221ENST00000533350 MFSD10Q14728 455 aa10□□□□□ -0.81
PICALM-221ENST00000533350 PPP1R15BQ5SWA1 713 aa10□□□□□ -0.81
PICALM-221ENST00000533350 GPR153Q6NV75 609 aa10□□□□□ -0.81
PICALM-221ENST00000533350 GPHNQ9NQX3 736 aaPredicted RBP10□□□□□ -0.81
PICALM-221ENST00000533350 ANKRD13DQ6ZTN6 518 aa9.97□□□□□ -0.81
PICALM-221ENST00000533350 DSG2Q14126 1118 aa9.93□□□□□ -0.82
PICALM-221ENST00000533350 TMEM92Q6UXU6 159 aa9.93□□□□□ -0.82
PICALM-221ENST00000533350 C2orf72A6NCS6 295 aa9.91□□□□□ -0.82
PICALM-221ENST00000533350 SMYD5Q6GMV2 418 aa9.91□□□□□ -0.82
PICALM-221ENST00000533350 PLPP6Q8IY26 295 aa9.91□□□□□ -0.82
PICALM-221ENST00000533350 FOXK1P85037 733 aa9.9□□□□□ -0.82
PICALM-221ENST00000533350 SEMA3EO15041 775 aa9.89□□□□□ -0.83
PICALM-221ENST00000533350 CAMK2BQ13554 666 aa9.89□□□□□ -0.83
PICALM-221ENST00000533350 ARSIQ5FYB1 569 aa9.89□□□□□ -0.83
PICALM-221ENST00000533350 LMOD2Q6P5Q4 547 aa9.88□□□□□ -0.83
PICALM-221ENST00000533350 PLA2G2EQ9NZK7 142 aa9.88□□□□□ -0.83
PICALM-221ENST00000533350 LSM11P83369 360 aaKnown RBP eCLIP9.87□□□□□ -0.83
PICALM-221ENST00000533350 DPYSL4O14531 572 aa9.86□□□□□ -0.83
PICALM-221ENST00000533350 ZNF316A6NFI3 1004 aaPredicted RBP9.85□□□□□ -0.83
PICALM-221ENST00000533350 MAP3K9P80192 1104 aa9.85□□□□□ -0.83
PICALM-221ENST00000533350 UPF1Q92900 1129 aaKnown RBP eCLIP9.84□□□□□ -0.83
PICALM-221ENST00000533350 ARIH1Q9Y4X5 557 aaPredicted RBP9.84□□□□□ -0.83
PICALM-221ENST00000533350 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.83□□□□□ -0.84
PICALM-221ENST00000533350 TESPA1A2RU30 521 aaPredicted RBP9.82□□□□□ -0.84
PICALM-221ENST00000533350 KIF3CO14782 793 aa9.82□□□□□ -0.84
PICALM-221ENST00000533350 EMILIN3Q9NT22 766 aa9.82□□□□□ -0.84
PICALM-221ENST00000533350 SPDYE16A6NNV3 312 aaPredicted RBP9.81□□□□□ -0.84
PICALM-221ENST00000533350 KHSRPQ92945 711 aaKnown RBP eCLIP9.81□□□□□ -0.847e-15■■□□□ 13
PICALM-221ENST00000533350 HCSTQ9UBK5 93 aa9.81□□□□□ -0.84
PICALM-221ENST00000533350 TBC1D12O60347 775 aa9.79□□□□□ -0.84
PICALM-221ENST00000533350 PBX2P40425 430 aa9.77□□□□□ -0.85
PICALM-221ENST00000533350 PDIA6Q15084 440 aa9.76□□□□□ -0.85
PICALM-221ENST00000533350 GRXCR2A6NFK2 248 aa9.74□□□□□ -0.85
PICALM-221ENST00000533350 MLLT3P42568 568 aaPredicted RBP9.74□□□□□ -0.85
PICALM-221ENST00000533350 POTEEQ6S8J3 1075 aa9.72□□□□□ -0.85
PICALM-221ENST00000533350 AXIN2Q9Y2T1 843 aa9.72□□□□□ -0.85
PICALM-221ENST00000533350 GPIHBP1Q8IV16 184 aa9.71□□□□□ -0.86
PICALM-221ENST00000533350 OXER1Q8TDS5 423 aa9.71□□□□□ -0.86
PICALM-221ENST00000533350 RBM26Q5T8P6 1007 aaKnown RBP9.7□□□□□ -0.86
PICALM-221ENST00000533350 ZC3H15Q8WU90 426 aaKnown RBP9.7□□□□□ -0.86
PICALM-221ENST00000533350 EVI5O60447 810 aa9.69□□□□□ -0.86
PICALM-221ENST00000533350 NUDT7P0C024 238 aa9.68□□□□□ -0.86
PICALM-221ENST00000533350 DDX12PQ92771 950 aa9.68□□□□□ -0.86
PICALM-221ENST00000533350 LHX6Q9UPM6 363 aa9.67□□□□□ -0.86
PICALM-221ENST00000533350 PTCD2Q8WV60 388 aaKnown RBP9.66□□□□□ -0.86
PICALM-221ENST00000533350 NUTM2FA1L443 756 aa9.65□□□□□ -0.86
PICALM-221ENST00000533350 ADGRD1Q6QNK2 874 aa9.65□□□□□ -0.86
PICALM-221ENST00000533350 KRI1Q8N9T8 703 aaKnown RBP9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms