RNA–Protein interactions for RNA: ENST00000533308.1

COMMD9-207, Transcript of COMM domain containing 9, humanhuman

TSL 3

Gene COMMD9, Length 374 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9-207ENST00000533308 PHLDB1Q86UU1 1377 aa12.35□□□□□ -0.43
COMMD9-207ENST00000533308 ARAP3Q8WWN8 1544 aa12.35□□□□□ -0.43
COMMD9-207ENST00000533308 FANCAO15360 1455 aa12.34□□□□□ -0.43
COMMD9-207ENST00000533308 TEX14Q8IWB6 1497 aa12.34□□□□□ -0.43
COMMD9-207ENST00000533308 CCNB3Q8WWL7 1395 aa12.33□□□□□ -0.44
COMMD9-207ENST00000533308 FRMPD1Q5SYB0 1578 aa12.33□□□□□ -0.44
COMMD9-207ENST00000533308 ABCC1P33527 1531 aa12.32□□□□□ -0.44
COMMD9-207ENST00000533308 KDM6BO15054 1643 aa12.32□□□□□ -0.44
COMMD9-207ENST00000533308 COL17A1Q9UMD9 1497 aaPredicted RBP12.32□□□□□ -0.44
COMMD9-207ENST00000533308 MYOM3Q5VTT5 1437 aa12.31□□□□□ -0.44
COMMD9-207ENST00000533308 NEO1Q92859 1461 aa12.31□□□□□ -0.44
COMMD9-207ENST00000533308 SYCP2Q9BX26 1530 aa12.31□□□□□ -0.44
COMMD9-207ENST00000533308 ARHGEF12Q9NZN5 1544 aa12.31□□□□□ -0.44
COMMD9-207ENST00000533308 RICTORQ6R327 1708 aa12.31□□□□□ -0.44
COMMD9-207ENST00000533308 CAMSAP2Q08AD1 1489 aa12.3□□□□□ -0.44
COMMD9-207ENST00000533308 PTPN23Q9H3S7 1636 aa12.29□□□□□ -0.44
COMMD9-207ENST00000533308 AKNAQ7Z591 1439 aa12.29□□□□□ -0.44
COMMD9-207ENST00000533308 ADGRL1O94910 1474 aa12.29□□□□□ -0.44
COMMD9-207ENST00000533308 ZNF644Q9H582 1327 aaPredicted RBP12.28□□□□□ -0.44
COMMD9-207ENST00000533308 FGD6Q6ZV73 1430 aa12.28□□□□□ -0.44
COMMD9-207ENST00000533308 CFDP1Q9UEE9 299 aaPredicted RBP12.26□□□□□ -0.45
COMMD9-207ENST00000533308 ZNF777Q9ULD5 760 aaPredicted RBP12.26□□□□□ -0.45
COMMD9-207ENST00000533308 POGZQ7Z3K3 1410 aa12.25□□□□□ -0.45
COMMD9-207ENST00000533308 SCAPERQ9BY12 1400 aa12.25□□□□□ -0.45
COMMD9-207ENST00000533308 TRAPPC8Q9Y2L5 1435 aa12.25□□□□□ -0.45
COMMD9-207ENST00000533308 CROCC2H7BZ55 1655 aa12.24□□□□□ -0.45
COMMD9-207ENST00000533308 TCOF1Q13428 1488 aaKnown RBP12.24□□□□□ -0.45
COMMD9-207ENST00000533308 EFCAB2Q5VUJ9 269 aa12.24□□□□□ -0.45
COMMD9-207ENST00000533308 MIA2Q96PC5 1412 aa12.24□□□□□ -0.45
COMMD9-207ENST00000533308 KDM5CP41229 1560 aa12.23□□□□□ -0.45
COMMD9-207ENST00000533308 DENND4BO75064 1496 aaPredicted RBP12.23□□□□□ -0.45
COMMD9-207ENST00000533308 MBD5Q9P267 1494 aa12.23□□□□□ -0.45
COMMD9-207ENST00000533308 ZMYM4Q5VZL5 1548 aa12.22□□□□□ -0.45
COMMD9-207ENST00000533308 RAPGEF3O95398 923 aa12.22□□□□□ -0.45
COMMD9-207ENST00000533308 ARHGEF5Q12774 1597 aa12.22□□□□□ -0.45
COMMD9-207ENST00000533308 HNRNPMP52272 730 aaKnown RBP eCLIP12.21□□□□□ -0.45
COMMD9-207ENST00000533308 DNMT1P26358 1616 aaKnown RBP12.21□□□□□ -0.46
COMMD9-207ENST00000533308 HECW2Q9P2P5 1572 aa12.21□□□□□ -0.46
COMMD9-207ENST00000533308 INO80Q9ULG1 1556 aaPredicted RBP12.21□□□□□ -0.46
COMMD9-207ENST00000533308 PLEKHH2Q8IVE3 1493 aa12.21□□□□□ -0.46
COMMD9-207ENST00000533308 KIAA1107Q9UPP5 1409 aa12.2□□□□□ -0.46
COMMD9-207ENST00000533308 KIDINS220Q9ULH0 1771 aa12.2□□□□□ -0.46
COMMD9-207ENST00000533308 ABCA6Q8N139 1617 aa12.2□□□□□ -0.46
COMMD9-207ENST00000533308 ZFYVE16Q7Z3T8 1539 aa12.2□□□□□ -0.46
COMMD9-207ENST00000533308 SIGLEC1Q9BZZ2 1709 aa12.2□□□□□ -0.46
COMMD9-207ENST00000533308 RRBP1Q9P2E9 1410 aaKnown RBP12.2□□□□□ -0.46
COMMD9-207ENST00000533308 ARHGEF40Q8TER5 1519 aa12.19□□□□□ -0.46
COMMD9-207ENST00000533308 ZNF518AQ6AHZ1 1483 aa12.19□□□□□ -0.46
COMMD9-207ENST00000533308 CCDC141Q6ZP82 1450 aa12.19□□□□□ -0.46
COMMD9-207ENST00000533308 AFAP1Q8N556 730 aa12.18□□□□□ -0.46
COMMD9-207ENST00000533308 YEATS2Q9ULM3 1422 aa12.18□□□□□ -0.46
COMMD9-207ENST00000533308 ADGBQ8N7X0 1667 aa12.17□□□□□ -0.46
COMMD9-207ENST00000533308 ABCC5O15440 1437 aa12.17□□□□□ -0.46
COMMD9-207ENST00000533308 DIP2CQ9Y2E4 1556 aa12.17□□□□□ -0.46
COMMD9-207ENST00000533308 ATP7AQ04656 1500 aa12.16□□□□□ -0.46
COMMD9-207ENST00000533308 FAM50AQ14320 339 aaKnown RBP12.16□□□□□ -0.46
COMMD9-207ENST00000533308 DAPK1P53355 1430 aa12.16□□□□□ -0.46
COMMD9-207ENST00000533308 MAST1Q9Y2H9 1570 aa12.16□□□□□ -0.46
COMMD9-207ENST00000533308 PTPRKQ15262 1439 aa12.15□□□□□ -0.46
COMMD9-207ENST00000533308 C9orf84Q5VXU9 1444 aa12.13□□□□□ -0.47
COMMD9-207ENST00000533308 MLH3Q9UHC1 1453 aa12.13□□□□□ -0.47
COMMD9-207ENST00000533308 SHANK2Q9UPX8 1470 aa12.13□□□□□ -0.47
COMMD9-207ENST00000533308 PLXNC1O60486 1568 aa12.12□□□□□ -0.47
COMMD9-207ENST00000533308 SPAG9O60271 1321 aaKnown RBP12.11□□□□□ -0.47
COMMD9-207ENST00000533308 MAGI2Q86UL8 1455 aa12.1□□□□□ -0.47
COMMD9-207ENST00000533308 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.1□□□□□ -0.47
COMMD9-207ENST00000533308 ITGAEP38570 1179 aa12.1□□□□□ -0.47
COMMD9-207ENST00000533308 CHIC2Q9UKJ5 165 aa12.08□□□□□ -0.48
COMMD9-207ENST00000533308 ADGRL2O95490 1459 aa12.08□□□□□ -0.48
COMMD9-207ENST00000533308 RTEL1-TNFRSF6BF6WH68 1400 aa12.07□□□□□ -0.48
COMMD9-207ENST00000533308 REREQ9P2R6 1566 aa12.07□□□□□ -0.48
COMMD9-207ENST00000533308 MYT1LQ9UL68 1186 aa12.07□□□□□ -0.48
COMMD9-207ENST00000533308 ATP10AO60312 1499 aa12.06□□□□□ -0.48
COMMD9-207ENST00000533308 GCC2Q8IWJ2 1684 aa12.06□□□□□ -0.48
COMMD9-207ENST00000533308 A2MP01023 1474 aa12.05□□□□□ -0.48
COMMD9-207ENST00000533308 RSPH4AQ5TD94 716 aa12.04□□□□□ -0.48
COMMD9-207ENST00000533308 KIF15Q9NS87 1388 aa12.04□□□□□ -0.48
COMMD9-207ENST00000533308 NCOA1Q15788 1441 aa12.03□□□□□ -0.48
COMMD9-207ENST00000533308 BCORL1Q5H9F3 1711 aa12.03□□□□□ -0.48
COMMD9-207ENST00000533308 DUOX2Q9NRD8 1548 aa12.03□□□□□ -0.48
COMMD9-207ENST00000533308 TSPY4P0CV99 314 aa12.03□□□□□ -0.48
COMMD9-207ENST00000533308 TSPY10P0CW01 314 aa12.03□□□□□ -0.48
COMMD9-207ENST00000533308 MROH1Q8NDA8 1641 aa12.02□□□□□ -0.49
COMMD9-207ENST00000533308 EIF2AK4Q9P2K8 1649 aaKnown RBP12.02□□□□□ -0.49
COMMD9-207ENST00000533308 RRP7BPQ9NSQ0 103 aa12.02□□□□□ -0.49
COMMD9-207ENST00000533308 ANKRD30AQ9BXX3 1397 aa12.02□□□□□ -0.49
COMMD9-207ENST00000533308 AGLP35573 1532 aa12.01□□□□□ -0.49
COMMD9-207ENST00000533308 ROCK1Q13464 1354 aa12□□□□□ -0.49
COMMD9-207ENST00000533308 MADDQ8WXG6 1647 aa12□□□□□ -0.49
COMMD9-207ENST00000533308 RNF17Q9BXT8 1623 aaKnown RBP12□□□□□ -0.49
COMMD9-207ENST00000533308 FER1L4A9Z1Z3 1794 aa12□□□□□ -0.49
COMMD9-207ENST00000533308 DHX29Q7Z478 1369 aaKnown RBP11.99□□□□□ -0.49
COMMD9-207ENST00000533308 NAIPQ13075 1403 aa11.99□□□□□ -0.49
COMMD9-207ENST00000533308 DEPDC5O75140 1603 aa11.99□□□□□ -0.49
COMMD9-207ENST00000533308 ADAMTSL3P82987 1691 aa11.99□□□□□ -0.49
COMMD9-207ENST00000533308 ERBINQ96RT1 1412 aa11.98□□□□□ -0.49
COMMD9-207ENST00000533308 CEP152O94986 1710 aa11.97□□□□□ -0.49
COMMD9-207ENST00000533308 ANKRD50Q9ULJ7 1429 aa11.97□□□□□ -0.49
COMMD9-207ENST00000533308 MLECQ14165 292 aa11.97□□□□□ -0.49
COMMD9-207ENST00000533308 RIMS1Q86UR5 1692 aaKnown RBP11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms