RNA–Protein interactions for RNA: ENST00000532935.5

CPSF1-210, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-210ENST00000532935 EFCAB2Q5VUJ9 269 aa24.53■■□□□ 1.52
CPSF1-210ENST00000532935 KDM4FA0A1W2PPD8 638 aa24.51■■□□□ 1.51
CPSF1-210ENST00000532935 VPS8Q8N3P4 1428 aa24.51■■□□□ 1.51
CPSF1-210ENST00000532935 MTUS2Q5JR59 1369 aa24.49■■□□□ 1.51
CPSF1-210ENST00000532935 SCAPERQ9BY12 1400 aa24.49■■□□□ 1.51
CPSF1-210ENST00000532935 ZMYM4Q5VZL5 1548 aa24.47■■□□□ 1.51
CPSF1-210ENST00000532935 EHBP1L1Q8N3D4 1523 aa24.47■■□□□ 1.51
CPSF1-210ENST00000532935 POGZQ7Z3K3 1410 aa24.46■■□□□ 1.51
CPSF1-210ENST00000532935 ARHGEF40Q8TER5 1519 aa24.45■■□□□ 1.51
CPSF1-210ENST00000532935 TIAM1Q13009 1591 aa24.44■■□□□ 1.5
CPSF1-210ENST00000532935 GPATCH8Q9UKJ3 1502 aaKnown RBP24.41■■□□□ 1.5
CPSF1-210ENST00000532935 ABCC1P33527 1531 aa24.4■■□□□ 1.5
CPSF1-210ENST00000532935 ITSN2Q9NZM3 1697 aa24.4■■□□□ 1.5
CPSF1-210ENST00000532935 ZFYVE16Q7Z3T8 1539 aa24.4■■□□□ 1.5
CPSF1-210ENST00000532935 MAGI2Q86UL8 1455 aa24.39■■□□□ 1.5
CPSF1-210ENST00000532935 SUPT6HQ7KZ85 1726 aaKnown RBP24.38■■□□□ 1.49
CPSF1-210ENST00000532935 ZNF518AQ6AHZ1 1483 aa24.38■■□□□ 1.49
CPSF1-210ENST00000532935 CCNB3Q8WWL7 1395 aa24.37■■□□□ 1.49
CPSF1-210ENST00000532935 SAMD9LQ8IVG5 1584 aa24.37■■□□□ 1.49
CPSF1-210ENST00000532935 KDM5CP41229 1560 aa24.36■■□□□ 1.49
CPSF1-210ENST00000532935 ARHGEF12Q9NZN5 1544 aa24.35■■□□□ 1.49
CPSF1-210ENST00000532935 YEATS2Q9ULM3 1422 aa24.35■■□□□ 1.49
CPSF1-210ENST00000532935 MAP3K1Q13233 1512 aa24.34■■□□□ 1.49
CPSF1-210ENST00000532935 AFAP1Q8N556 730 aa24.32■■□□□ 1.48
CPSF1-210ENST00000532935 BCORL1Q5H9F3 1711 aa24.31■■□□□ 1.48
CPSF1-210ENST00000532935 HECW2Q9P2P5 1572 aa24.31■■□□□ 1.48
CPSF1-210ENST00000532935 CFDP1Q9UEE9 299 aaPredicted RBP24.31■■□□□ 1.48
CPSF1-210ENST00000532935 ZNF777Q9ULD5 760 aaPredicted RBP24.31■■□□□ 1.48
CPSF1-210ENST00000532935 LRRC9Q6ZRR7 1453 aa24.31■■□□□ 1.48
CPSF1-210ENST00000532935 SIGLEC1Q9BZZ2 1709 aa24.3■■□□□ 1.48
CPSF1-210ENST00000532935 TRAPPC8Q9Y2L5 1435 aa24.3■■□□□ 1.48
CPSF1-210ENST00000532935 NCOA2Q15596 1464 aa24.3■■□□□ 1.48
CPSF1-210ENST00000532935 SYCP2Q9BX26 1530 aa24.3■■□□□ 1.48
CPSF1-210ENST00000532935 ADAMTSL3P82987 1691 aa24.29■■□□□ 1.48
CPSF1-210ENST00000532935 ARID4BQ4LE39 1312 aaPredicted RBP24.27■■□□□ 1.48
CPSF1-210ENST00000532935 PLEKHH2Q8IVE3 1493 aa24.26■■□□□ 1.47
CPSF1-210ENST00000532935 ATP10AO60312 1499 aa24.26■■□□□ 1.47
CPSF1-210ENST00000532935 MLH3Q9UHC1 1453 aa24.26■■□□□ 1.47
CPSF1-210ENST00000532935 KIAA1107Q9UPP5 1409 aa24.25■■□□□ 1.47
CPSF1-210ENST00000532935 DIP2CQ9Y2E4 1556 aa24.24■■□□□ 1.47
CPSF1-210ENST00000532935 ABCA6Q8N139 1617 aa24.24■■□□□ 1.47
CPSF1-210ENST00000532935 KIDINS220Q9ULH0 1771 aa24.24■■□□□ 1.47
CPSF1-210ENST00000532935 C9orf84Q5VXU9 1444 aa24.23■■□□□ 1.47
CPSF1-210ENST00000532935 HNRNPMP52272 730 aaKnown RBP eCLIP24.22■■□□□ 1.47
CPSF1-210ENST00000532935 MYT1LQ9UL68 1186 aa24.22■■□□□ 1.47
CPSF1-210ENST00000532935 KANK4Q5T7N3 995 aaPredicted RBP24.21■■□□□ 1.47
CPSF1-210ENST00000532935 MADDQ8WXG6 1647 aa24.21■■□□□ 1.47
CPSF1-210ENST00000532935 ZNF644Q9H582 1327 aaPredicted RBP24.18■■□□□ 1.46
CPSF1-210ENST00000532935 APLP2Q06481 763 aa24.18■■□□□ 1.46
CPSF1-210ENST00000532935 REREQ9P2R6 1566 aa24.17■■□□□ 1.46
CPSF1-210ENST00000532935 RIMS1Q86UR5 1692 aaKnown RBP24.15■■□□□ 1.46
CPSF1-210ENST00000532935 INO80Q9ULG1 1556 aaPredicted RBP24.15■■□□□ 1.46
CPSF1-210ENST00000532935 CAMSAP2Q08AD1 1489 aa24.14■■□□□ 1.46
CPSF1-210ENST00000532935 FER1L4A9Z1Z3 1794 aa24.14■■□□□ 1.45
CPSF1-210ENST00000532935 MBD5Q9P267 1494 aa24.13■■□□□ 1.45
CPSF1-210ENST00000532935 SPAG9O60271 1321 aaKnown RBP24.13■■□□□ 1.45
CPSF1-210ENST00000532935 ATP7AQ04656 1500 aa24.13■■□□□ 1.45
CPSF1-210ENST00000532935 PTPRMP28827 1452 aa24.13■■□□□ 1.45
CPSF1-210ENST00000532935 MLECQ14165 292 aa24.1■■□□□ 1.45
CPSF1-210ENST00000532935 MYOM3Q5VTT5 1437 aa24.09■■□□□ 1.45
CPSF1-210ENST00000532935 AGLP35573 1532 aa24.08■■□□□ 1.45
CPSF1-210ENST00000532935 CCDC141Q6ZP82 1450 aa24.07■■□□□ 1.44
CPSF1-210ENST00000532935 ADGBQ8N7X0 1667 aa24.06■■□□□ 1.44
CPSF1-210ENST00000532935 ARHGEF5Q12774 1597 aa24.06■■□□□ 1.44
CPSF1-210ENST00000532935 MIA2Q96PC5 1412 aa24.05■■□□□ 1.44
CPSF1-210ENST00000532935 PLXNC1O60486 1568 aa24.02■■□□□ 1.44
CPSF1-210ENST00000532935 RTEL1-TNFRSF6BF6WH68 1400 aa24.01■■□□□ 1.43
CPSF1-210ENST00000532935 RSPH4AQ5TD94 716 aa24.01■■□□□ 1.43
CPSF1-210ENST00000532935 A2MP01023 1474 aa24■■□□□ 1.43
CPSF1-210ENST00000532935 PTPN23Q9H3S7 1636 aa23.98■■□□□ 1.43
CPSF1-210ENST00000532935 MAST1Q9Y2H9 1570 aa23.94■■□□□ 1.42
CPSF1-210ENST00000532935 FGD6Q6ZV73 1430 aa23.93■■□□□ 1.42
CPSF1-210ENST00000532935 TSPY4P0CV99 314 aa23.93■■□□□ 1.42
CPSF1-210ENST00000532935 TSPY10P0CW01 314 aa23.93■■□□□ 1.42
CPSF1-210ENST00000532935 PLPPR3Q6T4P5 718 aa23.92■■□□□ 1.42
CPSF1-210ENST00000532935 CROCC2H7BZ55 1655 aa23.91■■□□□ 1.42
CPSF1-210ENST00000532935 C3P01024 1663 aa23.9■■□□□ 1.42
CPSF1-210ENST00000532935 TCOF1Q13428 1488 aaKnown RBP23.89■■□□□ 1.42
CPSF1-210ENST00000532935 DHX29Q7Z478 1369 aaKnown RBP23.89■■□□□ 1.41
CPSF1-210ENST00000532935 MROH2AA6NES4 1674 aa23.87■■□□□ 1.41
CPSF1-210ENST00000532935 ESF1Q9H501 851 aaKnown RBP23.87■■□□□ 1.41
CPSF1-210ENST00000532935 CNTLNQ9NXG0 1405 aa23.86■■□□□ 1.41
CPSF1-210ENST00000532935 DNMT1P26358 1616 aaKnown RBP23.86■■□□□ 1.41
CPSF1-210ENST00000532935 CLTCQ00610 1675 aaKnown RBP23.86■■□□□ 1.41
CPSF1-210ENST00000532935 CEBPAP49715 358 aaPredicted RBP23.84■■□□□ 1.41
CPSF1-210ENST00000532935 ABCC5O15440 1437 aa23.84■■□□□ 1.41
CPSF1-210ENST00000532935 LMTK3Q96Q04 1460 aa23.83■■□□□ 1.41
CPSF1-210ENST00000532935 SETD1BQ9UPS6 1966 aaKnown RBP23.83■■□□□ 1.41
CPSF1-210ENST00000532935 PREX1Q8TCU6 1659 aa23.83■■□□□ 1.4
CPSF1-210ENST00000532935 SHANK2Q9UPX8 1470 aa23.82■■□□□ 1.4
CPSF1-210ENST00000532935 GGT6Q6P531 493 aa23.82■■□□□ 1.4
CPSF1-210ENST00000532935 DAPK1P53355 1430 aa23.81■■□□□ 1.4
CPSF1-210ENST00000532935 KIF3BO15066 747 aa23.78■■□□□ 1.4
CPSF1-210ENST00000532935 EIF2AK4Q9P2K8 1649 aaKnown RBP23.77■■□□□ 1.4
CPSF1-210ENST00000532935 PPP6R1Q9UPN7 881 aa23.77■■□□□ 1.4
CPSF1-210ENST00000532935 DUOX2Q9NRD8 1548 aa23.75■■□□□ 1.39
CPSF1-210ENST00000532935 RNF17Q9BXT8 1623 aaKnown RBP23.75■■□□□ 1.39
CPSF1-210ENST00000532935 ZMYM3Q14202 1370 aa23.75■■□□□ 1.39
CPSF1-210ENST00000532935 PPARGC1BQ86YN6 1023 aaKnown RBP23.74■■□□□ 1.39
CPSF1-210ENST00000532935 FAM50AQ14320 339 aaKnown RBP23.73■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms