RNA–Protein interactions for RNA: ENST00000532661.5

LTBP3-220, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 3

Gene LTBP3, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-220ENST00000532661 ZMYM4Q5VZL5 1548 aa37.26■■■■□ 3.55
LTBP3-220ENST00000532661 POGZQ7Z3K3 1410 aa37.25■■■■□ 3.55
LTBP3-220ENST00000532661 ADAMTSL3P82987 1691 aa37.22■■■■□ 3.55
LTBP3-220ENST00000532661 ARHGAP5Q13017 1502 aa37.21■■■■□ 3.55
LTBP3-220ENST00000532661 ZFYVE16Q7Z3T8 1539 aa37.2■■■■□ 3.55
LTBP3-220ENST00000532661 BCORL1Q5H9F3 1711 aa37.18■■■■□ 3.54
LTBP3-220ENST00000532661 MAGI2Q86UL8 1455 aa37.18■■■■□ 3.54
LTBP3-220ENST00000532661 HECW2Q9P2P5 1572 aa37.16■■■■□ 3.54
LTBP3-220ENST00000532661 PTPRMP28827 1452 aa37.15■■■■□ 3.54
LTBP3-220ENST00000532661 AFAP1Q8N556 730 aa37.12■■■■□ 3.53
LTBP3-220ENST00000532661 CDC42BPBQ9Y5S2 1711 aa37.1■■■■□ 3.53
LTBP3-220ENST00000532661 MADDQ8WXG6 1647 aa37.1■■■■□ 3.53
LTBP3-220ENST00000532661 SIGLEC1Q9BZZ2 1709 aa37.09■■■■□ 3.53
LTBP3-220ENST00000532661 CEP162Q5TB80 1403 aa37.08■■■■□ 3.53
LTBP3-220ENST00000532661 PREX2Q70Z35 1606 aa37.05■■■■□ 3.52
LTBP3-220ENST00000532661 ZNF518AQ6AHZ1 1483 aa37.05■■■■□ 3.52
LTBP3-220ENST00000532661 MLECQ14165 292 aa37.03■■■■□ 3.52
LTBP3-220ENST00000532661 ATP10AO60312 1499 aa37.02■■■■□ 3.52
LTBP3-220ENST00000532661 ARHGEF12Q9NZN5 1544 aa37.01■■■■□ 3.52
LTBP3-220ENST00000532661 LOC105371045A0A1W2PR82 267 aa37■■■■□ 3.51
LTBP3-220ENST00000532661 KDM5CP41229 1560 aa36.99■■■■□ 3.51
LTBP3-220ENST00000532661 MYT1LQ9UL68 1186 aa36.98■■■■□ 3.51
LTBP3-220ENST00000532661 TRAPPC8Q9Y2L5 1435 aa36.98■■■■□ 3.51
LTBP3-220ENST00000532661 CDC42BPAQ5VT25 1732 aa36.96■■■■□ 3.51
LTBP3-220ENST00000532661 ABCC1P33527 1531 aa36.96■■■■□ 3.51
LTBP3-220ENST00000532661 C9orf84Q5VXU9 1444 aa36.96■■■■□ 3.51
LTBP3-220ENST00000532661 ZNF777Q9ULD5 760 aaPredicted RBP36.95■■■■□ 3.51
LTBP3-220ENST00000532661 RIMS1Q86UR5 1692 aaKnown RBP36.95■■■■□ 3.51
LTBP3-220ENST00000532661 GPATCH8Q9UKJ3 1502 aaKnown RBP36.95■■■■□ 3.5
LTBP3-220ENST00000532661 MTUS2Q5JR59 1369 aa36.92■■■■□ 3.5
LTBP3-220ENST00000532661 PLPPR3Q6T4P5 718 aa36.92■■■■□ 3.5
LTBP3-220ENST00000532661 MLH3Q9UHC1 1453 aa36.88■■■■□ 3.49
LTBP3-220ENST00000532661 ITSN2Q9NZM3 1697 aa36.87■■■■□ 3.49
LTBP3-220ENST00000532661 CCNB3Q8WWL7 1395 aa36.85■■■■□ 3.49
LTBP3-220ENST00000532661 DIP2CQ9Y2E4 1556 aa36.85■■■■□ 3.49
LTBP3-220ENST00000532661 SAMD9LQ8IVG5 1584 aa36.84■■■■□ 3.49
LTBP3-220ENST00000532661 CFDP1Q9UEE9 299 aaPredicted RBP36.84■■■■□ 3.49
LTBP3-220ENST00000532661 HNRNPMP52272 730 aaKnown RBP eCLIP36.82■■■■□ 3.48
LTBP3-220ENST00000532661 ABCA6Q8N139 1617 aa36.81■■■■□ 3.48
LTBP3-220ENST00000532661 SYCP2Q9BX26 1530 aa36.78■■■■□ 3.48
LTBP3-220ENST00000532661 FER1L4A9Z1Z3 1794 aa36.76■■■■□ 3.48
LTBP3-220ENST00000532661 EHBP1L1Q8N3D4 1523 aa36.75■■■■□ 3.47
LTBP3-220ENST00000532661 LMTK3Q96Q04 1460 aa36.75■■■■□ 3.47
LTBP3-220ENST00000532661 REREQ9P2R6 1566 aa36.73■■■■□ 3.47
LTBP3-220ENST00000532661 KIDINS220Q9ULH0 1771 aa36.73■■■■□ 3.47
LTBP3-220ENST00000532661 KIAA1107Q9UPP5 1409 aa36.71■■■■□ 3.47
LTBP3-220ENST00000532661 ZNF644Q9H582 1327 aaPredicted RBP36.71■■■■□ 3.47
LTBP3-220ENST00000532661 TIAM1Q13009 1591 aa36.7■■■■□ 3.47
LTBP3-220ENST00000532661 SPAG9O60271 1321 aaKnown RBP36.7■■■■□ 3.47
LTBP3-220ENST00000532661 CEBPAP49715 358 aaPredicted RBP36.69■■■■□ 3.46
LTBP3-220ENST00000532661 PLEKHH2Q8IVE3 1493 aa36.68■■■■□ 3.46
LTBP3-220ENST00000532661 VPS8Q8N3P4 1428 aa36.66■■■■□ 3.46
LTBP3-220ENST00000532661 HSPA2P54652 639 aa36.65■■■■□ 3.46
LTBP3-220ENST00000532661 AGLP35573 1532 aa36.64■■■■□ 3.46
LTBP3-220ENST00000532661 NCOA2Q15596 1464 aa36.59■■■■□ 3.45
LTBP3-220ENST00000532661 ILDR1Q86SU0 546 aaPredicted RBP36.57■■■■□ 3.44
LTBP3-220ENST00000532661 ATP7AQ04656 1500 aa36.56■■■■□ 3.44
LTBP3-220ENST00000532661 MBD5Q9P267 1494 aa36.55■■■■□ 3.44
LTBP3-220ENST00000532661 INO80Q9ULG1 1556 aaPredicted RBP36.53■■■■□ 3.44
LTBP3-220ENST00000532661 SUPT6HQ7KZ85 1726 aaKnown RBP36.52■■■■□ 3.44
LTBP3-220ENST00000532661 ESF1Q9H501 851 aaKnown RBP36.52■■■■□ 3.44
LTBP3-220ENST00000532661 LRRC9Q6ZRR7 1453 aa36.49■■■■□ 3.43
LTBP3-220ENST00000532661 KANK4Q5T7N3 995 aaPredicted RBP36.48■■■■□ 3.43
LTBP3-220ENST00000532661 A2MP01023 1474 aa36.47■■■■□ 3.43
LTBP3-220ENST00000532661 CAMSAP2Q08AD1 1489 aa36.42■■■■□ 3.42
LTBP3-220ENST00000532661 PLXNC1O60486 1568 aa36.41■■■■□ 3.42
LTBP3-220ENST00000532661 C3P01024 1663 aa36.41■■■■□ 3.42
LTBP3-220ENST00000532661 PREX1Q8TCU6 1659 aa36.4■■■■□ 3.42
LTBP3-220ENST00000532661 CNTLNQ9NXG0 1405 aa36.39■■■■□ 3.42
LTBP3-220ENST00000532661 MAP3K1Q13233 1512 aa36.38■■■■□ 3.41
LTBP3-220ENST00000532661 RTEL1-TNFRSF6BF6WH68 1400 aa36.37■■■■□ 3.41
LTBP3-220ENST00000532661 GGT6Q6P531 493 aa36.36■■■■□ 3.41
LTBP3-220ENST00000532661 CCDC141Q6ZP82 1450 aa36.36■■■■□ 3.41
LTBP3-220ENST00000532661 UHRF1BP1Q6BDS2 1440 aa36.35■■■■□ 3.41
LTBP3-220ENST00000532661 ZMYM3Q14202 1370 aa36.31■■■■□ 3.4
LTBP3-220ENST00000532661 RSPH4AQ5TD94 716 aa36.31■■■■□ 3.4
LTBP3-220ENST00000532661 ADGBQ8N7X0 1667 aa36.31■■■■□ 3.4
LTBP3-220ENST00000532661 DHX29Q7Z478 1369 aaKnown RBP36.28■■■■□ 3.4
LTBP3-220ENST00000532661 SETD1BQ9UPS6 1966 aaKnown RBP36.27■■■■□ 3.4
LTBP3-220ENST00000532661 MROH2AA6NES4 1674 aa36.23■■■■□ 3.39
LTBP3-220ENST00000532661 ARHGEF5Q12774 1597 aa36.23■■■■□ 3.39
LTBP3-220ENST00000532661 CLTCQ00610 1675 aaKnown RBP36.23■■■■□ 3.39
LTBP3-220ENST00000532661 TSPY4P0CV99 314 aa36.22■■■■□ 3.39
LTBP3-220ENST00000532661 TSPY10P0CW01 314 aa36.22■■■■□ 3.39
LTBP3-220ENST00000532661 MYOM3Q5VTT5 1437 aa36.21■■■■□ 3.39
LTBP3-220ENST00000532661 KIF3BO15066 747 aa36.2■■■■□ 3.39
LTBP3-220ENST00000532661 APLP2Q06481 763 aa36.2■■■■□ 3.39
LTBP3-220ENST00000532661 PPP6R1Q9UPN7 881 aa36.19■■■■□ 3.38
LTBP3-220ENST00000532661 NPATQ14207 1427 aa36.18■■■■□ 3.38
LTBP3-220ENST00000532661 MIA2Q96PC5 1412 aa36.17■■■■□ 3.38
LTBP3-220ENST00000532661 FBXO41Q8TF61 875 aa36.15■■■■□ 3.38
LTBP3-220ENST00000532661 STRCQ7RTU9 1775 aa36.15■■■■□ 3.38
LTBP3-220ENST00000532661 PTPRKQ15262 1439 aa36.13■■■■□ 3.37
LTBP3-220ENST00000532661 DMRT2Q9Y5R5 561 aa36.08■■■■□ 3.37
LTBP3-220ENST00000532661 MAST1Q9Y2H9 1570 aa36.05■■■■□ 3.36
LTBP3-220ENST00000532661 CERKQ8TCT0 537 aa36.02■■■■□ 3.36
LTBP3-220ENST00000532661 WASHC2CQ9Y4E1 1318 aa36.01■■■■□ 3.35
LTBP3-220ENST00000532661 NCOA1Q15788 1441 aa36■■■■□ 3.35
LTBP3-220ENST00000532661 FBXO31Q5XUX0 539 aaPredicted RBP35.99■■■■□ 3.35
LTBP3-220ENST00000532661 KDM5DQ9BY66 1539 aa35.98■■■■□ 3.35
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms