RNA–Protein interactions for RNA: ENST00000532285.1

CAPN1-222, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-222ENST00000532285 PREX2Q70Z35 1606 aa36.65■■■■□ 3.46
CAPN1-222ENST00000532285 SCAPERQ9BY12 1400 aa36.64■■■■□ 3.46
CAPN1-222ENST00000532285 CDC42BPAQ5VT25 1732 aa36.63■■■■□ 3.45
CAPN1-222ENST00000532285 MTUS2Q5JR59 1369 aa36.6■■■■□ 3.45
CAPN1-222ENST00000532285 ZMYM4Q5VZL5 1548 aa36.59■■■■□ 3.45
CAPN1-222ENST00000532285 VPS8Q8N3P4 1428 aa36.58■■■■□ 3.45
CAPN1-222ENST00000532285 POGZQ7Z3K3 1410 aa36.57■■■■□ 3.44
CAPN1-222ENST00000532285 ARHGEF40Q8TER5 1519 aa36.54■■■■□ 3.44
CAPN1-222ENST00000532285 MAGI2Q86UL8 1455 aa36.52■■■■□ 3.44
CAPN1-222ENST00000532285 EHBP1L1Q8N3D4 1523 aa36.52■■■■□ 3.44
CAPN1-222ENST00000532285 ZFYVE16Q7Z3T8 1539 aa36.48■■■■□ 3.43
CAPN1-222ENST00000532285 GPATCH8Q9UKJ3 1502 aaKnown RBP36.48■■■■□ 3.43
CAPN1-222ENST00000532285 ZNF518AQ6AHZ1 1483 aa36.47■■■■□ 3.43
CAPN1-222ENST00000532285 TIAM1Q13009 1591 aa36.45■■■■□ 3.43
CAPN1-222ENST00000532285 CCNB3Q8WWL7 1395 aa36.44■■■■□ 3.42
CAPN1-222ENST00000532285 ABCC1P33527 1531 aa36.44■■■■□ 3.42
CAPN1-222ENST00000532285 ITSN2Q9NZM3 1697 aa36.42■■■■□ 3.42
CAPN1-222ENST00000532285 YEATS2Q9ULM3 1422 aa36.41■■■■□ 3.42
CAPN1-222ENST00000532285 KDM5CP41229 1560 aa36.4■■■■□ 3.42
CAPN1-222ENST00000532285 AFAP1Q8N556 730 aa36.39■■■■□ 3.42
CAPN1-222ENST00000532285 ARID4BQ4LE39 1312 aaPredicted RBP36.37■■■■□ 3.41
CAPN1-222ENST00000532285 SUPT6HQ7KZ85 1726 aaKnown RBP36.37■■■■□ 3.41
CAPN1-222ENST00000532285 SAMD9LQ8IVG5 1584 aa36.37■■■■□ 3.41
CAPN1-222ENST00000532285 ARHGEF12Q9NZN5 1544 aa36.37■■■■□ 3.41
CAPN1-222ENST00000532285 CFDP1Q9UEE9 299 aaPredicted RBP36.36■■■■□ 3.41
CAPN1-222ENST00000532285 ZNF777Q9ULD5 760 aaPredicted RBP36.36■■■■□ 3.41
CAPN1-222ENST00000532285 BCORL1Q5H9F3 1711 aa36.35■■■■□ 3.41
CAPN1-222ENST00000532285 MAP3K1Q13233 1512 aa36.34■■■■□ 3.41
CAPN1-222ENST00000532285 ADAMTSL3P82987 1691 aa36.33■■■■□ 3.41
CAPN1-222ENST00000532285 HECW2Q9P2P5 1572 aa36.33■■■■□ 3.41
CAPN1-222ENST00000532285 TRAPPC8Q9Y2L5 1435 aa36.32■■■■□ 3.4
CAPN1-222ENST00000532285 ATP10AO60312 1499 aa36.31■■■■□ 3.4
CAPN1-222ENST00000532285 LRRC9Q6ZRR7 1453 aa36.29■■■■□ 3.4
CAPN1-222ENST00000532285 PLEKHH2Q8IVE3 1493 aa36.29■■■■□ 3.4
CAPN1-222ENST00000532285 NCOA2Q15596 1464 aa36.28■■■■□ 3.4
CAPN1-222ENST00000532285 MLH3Q9UHC1 1453 aa36.28■■■■□ 3.4
CAPN1-222ENST00000532285 SIGLEC1Q9BZZ2 1709 aa36.28■■■■□ 3.4
CAPN1-222ENST00000532285 MYT1LQ9UL68 1186 aa36.27■■■■□ 3.4
CAPN1-222ENST00000532285 SYCP2Q9BX26 1530 aa36.27■■■■□ 3.4
CAPN1-222ENST00000532285 KIAA1107Q9UPP5 1409 aa36.25■■■■□ 3.39
CAPN1-222ENST00000532285 C9orf84Q5VXU9 1444 aa36.25■■■■□ 3.39
CAPN1-222ENST00000532285 HNRNPMP52272 730 aaKnown RBP eCLIP36.22■■■■□ 3.39
CAPN1-222ENST00000532285 DIP2CQ9Y2E4 1556 aa36.2■■■■□ 3.39
CAPN1-222ENST00000532285 KIDINS220Q9ULH0 1771 aa36.2■■■■□ 3.38
CAPN1-222ENST00000532285 ABCA6Q8N139 1617 aa36.19■■■■□ 3.38
CAPN1-222ENST00000532285 MADDQ8WXG6 1647 aa36.19■■■■□ 3.38
CAPN1-222ENST00000532285 APLP2Q06481 763 aa36.17■■■■□ 3.38
CAPN1-222ENST00000532285 KANK4Q5T7N3 995 aaPredicted RBP36.16■■■■□ 3.38
CAPN1-222ENST00000532285 REREQ9P2R6 1566 aa36.15■■■■□ 3.38
CAPN1-222ENST00000532285 ZNF644Q9H582 1327 aaPredicted RBP36.14■■■■□ 3.38
CAPN1-222ENST00000532285 PTPRMP28827 1452 aa36.13■■■■□ 3.37
CAPN1-222ENST00000532285 SPAG9O60271 1321 aaKnown RBP36.11■■■■□ 3.37
CAPN1-222ENST00000532285 RIMS1Q86UR5 1692 aaKnown RBP36.1■■■■□ 3.37
CAPN1-222ENST00000532285 MLECQ14165 292 aa36.08■■■■□ 3.37
CAPN1-222ENST00000532285 FER1L4A9Z1Z3 1794 aa36.07■■■■□ 3.36
CAPN1-222ENST00000532285 MBD5Q9P267 1494 aa36.06■■■■□ 3.36
CAPN1-222ENST00000532285 ATP7AQ04656 1500 aa36.06■■■■□ 3.36
CAPN1-222ENST00000532285 INO80Q9ULG1 1556 aaPredicted RBP36.06■■■■□ 3.36
CAPN1-222ENST00000532285 CAMSAP2Q08AD1 1489 aa36.05■■■■□ 3.36
CAPN1-222ENST00000532285 AGLP35573 1532 aa36.02■■■■□ 3.36
CAPN1-222ENST00000532285 RSPH4AQ5TD94 716 aa35.98■■■■□ 3.35
CAPN1-222ENST00000532285 MYOM3Q5VTT5 1437 aa35.97■■■■□ 3.35
CAPN1-222ENST00000532285 CCDC141Q6ZP82 1450 aa35.95■■■■□ 3.35
CAPN1-222ENST00000532285 MIA2Q96PC5 1412 aa35.94■■■■□ 3.34
CAPN1-222ENST00000532285 ADGBQ8N7X0 1667 aa35.94■■■■□ 3.34
CAPN1-222ENST00000532285 ARHGEF5Q12774 1597 aa35.93■■■■□ 3.34
CAPN1-222ENST00000532285 RTEL1-TNFRSF6BF6WH68 1400 aa35.93■■■■□ 3.34
CAPN1-222ENST00000532285 A2MP01023 1474 aa35.88■■■■□ 3.33
CAPN1-222ENST00000532285 PLXNC1O60486 1568 aa35.87■■■■□ 3.33
CAPN1-222ENST00000532285 TSPY4P0CV99 314 aa35.82■■■■□ 3.32
CAPN1-222ENST00000532285 TSPY10P0CW01 314 aa35.82■■■■□ 3.32
CAPN1-222ENST00000532285 PLPPR3Q6T4P5 718 aa35.81■■■■□ 3.32
CAPN1-222ENST00000532285 ESF1Q9H501 851 aaKnown RBP35.79■■■■□ 3.32
CAPN1-222ENST00000532285 PTPN23Q9H3S7 1636 aa35.78■■■■□ 3.32
CAPN1-222ENST00000532285 DHX29Q7Z478 1369 aaKnown RBP35.75■■■■□ 3.31
CAPN1-222ENST00000532285 MAST1Q9Y2H9 1570 aa35.74■■■■□ 3.31
CAPN1-222ENST00000532285 FGD6Q6ZV73 1430 aa35.73■■■■□ 3.31
CAPN1-222ENST00000532285 CNTLNQ9NXG0 1405 aa35.73■■■■□ 3.31
CAPN1-222ENST00000532285 C3P01024 1663 aa35.72■■■■□ 3.31
CAPN1-222ENST00000532285 CEBPAP49715 358 aaPredicted RBP35.7■■■■□ 3.31
CAPN1-222ENST00000532285 MROH2AA6NES4 1674 aa35.68■■■■□ 3.3
CAPN1-222ENST00000532285 LMTK3Q96Q04 1460 aa35.68■■■■□ 3.3
CAPN1-222ENST00000532285 SETD1BQ9UPS6 1966 aaKnown RBP35.67■■■■□ 3.3
CAPN1-222ENST00000532285 TCOF1Q13428 1488 aaKnown RBP35.67■■■■□ 3.3
CAPN1-222ENST00000532285 GGT6Q6P531 493 aa35.66■■■■□ 3.3
CAPN1-222ENST00000532285 CROCC2H7BZ55 1655 aa35.65■■■■□ 3.3
CAPN1-222ENST00000532285 PPP6R1Q9UPN7 881 aa35.64■■■■□ 3.3
CAPN1-222ENST00000532285 CLTCQ00610 1675 aaKnown RBP35.63■■■■□ 3.29
CAPN1-222ENST00000532285 PREX1Q8TCU6 1659 aa35.63■■■■□ 3.29
CAPN1-222ENST00000532285 DNMT1P26358 1616 aaKnown RBP35.61■■■■□ 3.29
CAPN1-222ENST00000532285 KIF3BO15066 747 aa35.59■■■■□ 3.29
CAPN1-222ENST00000532285 SHANK2Q9UPX8 1470 aa35.59■■■■□ 3.29
CAPN1-222ENST00000532285 ABCC5O15440 1437 aa35.58■■■■□ 3.29
CAPN1-222ENST00000532285 ZMYM3Q14202 1370 aa35.56■■■■□ 3.28
CAPN1-222ENST00000532285 DAPK1P53355 1430 aa35.56■■■■□ 3.28
CAPN1-222ENST00000532285 EIF2AK4Q9P2K8 1649 aaKnown RBP35.5■■■■□ 3.27
CAPN1-222ENST00000532285 DUOX2Q9NRD8 1548 aa35.49■■■■□ 3.27
CAPN1-222ENST00000532285 FAM135AQ9P2D6 1515 aa35.49■■■■□ 3.27
CAPN1-222ENST00000532285 UHRF1BP1Q6BDS2 1440 aa35.49■■■■□ 3.27
CAPN1-222ENST00000532285 HSPA2P54652 639 aa35.48■■■■□ 3.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms