RNA–Protein interactions for RNA: ENST00000532146.1

CELF1-216, Transcript of CUGBP Elav-like family member 1, humanhuman

TSL 3

Gene CELF1, Length 473 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CELF1-216ENST00000532146 MICALL2Q8IY33 904 aa8.8□□□□□ -1
CELF1-216ENST00000532146 GTPBP6O43824 516 aaPredicted RBP8.77□□□□□ -1.01
CELF1-216ENST00000532146 TMEM92Q6UXU6 159 aa8.77□□□□□ -1.01
CELF1-216ENST00000532146 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.77□□□□□ -1.01
CELF1-216ENST00000532146 C3orf67Q6ZVT6 689 aa8.76□□□□□ -1.01
CELF1-216ENST00000532146 G3V3G9 751 aa8.73□□□□□ -1.01
CELF1-216ENST00000532146 BBXQ8WY36 941 aaPredicted RBP8.72□□□□□ -1.01
CELF1-216ENST00000532146 SNPHO15079 494 aa8.71□□□□□ -1.02
CELF1-216ENST00000532146 MARVELD3Q96A59 401 aa8.7□□□□□ -1.02
CELF1-216ENST00000532146 DCAF1Q9Y4B6 1507 aa8.69□□□□□ -1.02
CELF1-216ENST00000532146 KIF3CO14782 793 aa8.65□□□□□ -1.02
CELF1-216ENST00000532146 C2orf72A6NCS6 295 aa8.64□□□□□ -1.03
CELF1-216ENST00000532146 RYDENQ9NUL5 291 aaKnown RBP8.64□□□□□ -1.03
CELF1-216ENST00000532146 HOXB3P14651 431 aaPredicted RBP8.63□□□□□ -1.03
CELF1-216ENST00000532146 PAXIP1Q6ZW49 1069 aaPredicted RBP8.62□□□□□ -1.03
CELF1-216ENST00000532146 CADPS2Q86UW7 1296 aa8.62□□□□□ -1.03
CELF1-216ENST00000532146 EMP3P54852 163 aa8.61□□□□□ -1.03
CELF1-216ENST00000532146 SPRYD3Q8NCJ5 442 aa8.61□□□□□ -1.03
CELF1-216ENST00000532146 SHROOM4Q9ULL8 1493 aa8.61□□□□□ -1.03
CELF1-216ENST00000532146 CFAP44Q96MT7 982 aa8.6□□□□□ -1.03
CELF1-216ENST00000532146 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.6□□□□□ -1.03
CELF1-216ENST00000532146 NCKAP5LQ9HCH0 1330 aa8.58□□□□□ -1.04
CELF1-216ENST00000532146 TMC2Q8TDI7 906 aa8.57□□□□□ -1.04
CELF1-216ENST00000532146 GPHNQ9NQX3 736 aaPredicted RBP8.57□□□□□ -1.04
CELF1-216ENST00000532146 CRISPLD2Q9H0B8 497 aa8.56□□□□□ -1.04
CELF1-216ENST00000532146 DSG2Q14126 1118 aa8.55□□□□□ -1.04
CELF1-216ENST00000532146 HS3ST6Q96QI5 342 aa8.54□□□□□ -1.04
CELF1-216ENST00000532146 KRTAP3-3Q9BYR6 98 aa8.54□□□□□ -1.04
CELF1-216ENST00000532146 KRTAP3-2Q9BYR7 98 aa8.54□□□□□ -1.04
CELF1-216ENST00000532146 FAM205CA6NFA0 338 aa8.53□□□□□ -1.04
CELF1-216ENST00000532146 FOXK1P85037 733 aa8.52□□□□□ -1.05
CELF1-216ENST00000532146 DOK7Q18PE1 504 aa8.51□□□□□ -1.05
CELF1-216ENST00000532146 PLPP6Q8IY26 295 aa8.51□□□□□ -1.05
CELF1-216ENST00000532146 KHSRPQ92945 711 aaKnown RBP eCLIP8.5□□□□□ -1.05
CELF1-216ENST00000532146 LARP6Q9BRS8 491 aaKnown RBP8.5□□□□□ -1.05
CELF1-216ENST00000532146 PDE4AP27815 886 aa8.49□□□□□ -1.05
CELF1-216ENST00000532146 GPR153Q6NV75 609 aa8.49□□□□□ -1.05
CELF1-216ENST00000532146 TSHZ2Q9NRE2 1034 aa8.49□□□□□ -1.05
CELF1-216ENST00000532146 ARSIQ5FYB1 569 aa8.48□□□□□ -1.05
CELF1-216ENST00000532146 PPP1R15BQ5SWA1 713 aa8.48□□□□□ -1.05
CELF1-216ENST00000532146 ZNF710Q8N1W2 664 aa8.48□□□□□ -1.05
CELF1-216ENST00000532146 POTEB3A0JP26 581 aa8.47□□□□□ -1.05
CELF1-216ENST00000532146 HOXB1P14653 301 aaPredicted RBP8.47□□□□□ -1.05
CELF1-216ENST00000532146 MFSD10Q14728 455 aa8.47□□□□□ -1.05
CELF1-216ENST00000532146 POTEBQ6S5H4 581 aa8.47□□□□□ -1.05
CELF1-216ENST00000532146 MYO15BQ96JP2 1530 aa8.47□□□□□ -1.05
CELF1-216ENST00000532146 SLC34A2O95436 690 aa8.45□□□□□ -1.06
CELF1-216ENST00000532146 PLCB2Q00722 1185 aa8.45□□□□□ -1.06
CELF1-216ENST00000532146 DDX27Q96GQ7 796 aaKnown RBP8.45□□□□□ -1.06
CELF1-216ENST00000532146 ZSWIM6Q9HCJ5 1215 aa8.44□□□□□ -1.06
CELF1-216ENST00000532146 PCDHGA4Q9Y5G9 962 aa8.44□□□□□ -1.06
CELF1-216ENST00000532146 ABCC9O60706 1549 aa8.44□□□□□ -1.06
CELF1-216ENST00000532146 RIMBP2O15034 1052 aa8.43□□□□□ -1.06
CELF1-216ENST00000532146 PTCD2Q8WV60 388 aaKnown RBP8.42□□□□□ -1.06
CELF1-216ENST00000532146 RNF166Q96A37 237 aaPredicted RBP8.42□□□□□ -1.06
CELF1-216ENST00000532146 NUDT7P0C024 238 aa8.41□□□□□ -1.06
CELF1-216ENST00000532146 OXER1Q8TDS5 423 aa8.41□□□□□ -1.06
CELF1-216ENST00000532146 UPF1Q92900 1129 aaKnown RBP eCLIP8.41□□□□□ -1.06
CELF1-216ENST00000532146 EMILIN3Q9NT22 766 aa8.41□□□□□ -1.06
CELF1-216ENST00000532146 KDM4FA0A1W2PPD8 638 aa8.4□□□□□ -1.06
CELF1-216ENST00000532146 CAMK2BQ13554 666 aa8.37□□□□□ -1.07
CELF1-216ENST00000532146 SUPT5HO00267 1087 aaKnown RBP8.36□□□□□ -1.07
CELF1-216ENST00000532146 VARS2Q5ST30 1063 aaKnown RBP8.36□□□□□ -1.07
CELF1-216ENST00000532146 LHX6Q9UPM6 363 aa8.36□□□□□ -1.07
CELF1-216ENST00000532146 ERBB3P21860 1342 aa8.35□□□□□ -1.07
CELF1-216ENST00000532146 ZNF316A6NFI3 1004 aaPredicted RBP8.35□□□□□ -1.07
CELF1-216ENST00000532146 SCRIBQ14160 1630 aa8.34□□□□□ -1.07
CELF1-216ENST00000532146 MYT1LQ9UL68 1186 aa8.33□□□□□ -1.08
CELF1-216ENST00000532146 NACADO15069 1562 aa8.32□□□□□ -1.08
CELF1-216ENST00000532146 DPYSL4O14531 572 aa8.31□□□□□ -1.08
CELF1-216ENST00000532146 TBC1D12O60347 775 aa8.31□□□□□ -1.08
CELF1-216ENST00000532146 HAP1P54257 671 aaPredicted RBP8.31□□□□□ -1.08
CELF1-216ENST00000532146 EVI5O60447 810 aa8.29□□□□□ -1.08
CELF1-216ENST00000532146 MAP3K9P80192 1104 aa8.29□□□□□ -1.08
CELF1-216ENST00000532146 E2F4Q16254 413 aa8.29□□□□□ -1.08
CELF1-216ENST00000532146 WDR70Q9NW82 654 aa8.29□□□□□ -1.08
CELF1-216ENST00000532146 KDM2AQ9Y2K7 1162 aa8.29□□□□□ -1.08
CELF1-216ENST00000532146 POTEEQ6S8J3 1075 aa8.28□□□□□ -1.08
CELF1-216ENST00000532146 ANO8Q9HCE9 1232 aaPredicted RBP8.28□□□□□ -1.08
CELF1-216ENST00000532146 ZNF687Q8N1G0 1237 aa8.27□□□□□ -1.09
CELF1-216ENST00000532146 KCNV2Q8TDN2 545 aa8.24□□□□□ -1.09
CELF1-216ENST00000532146 FOSBP53539 338 aa8.23□□□□□ -1.09
CELF1-216ENST00000532146 AXIN2Q9Y2T1 843 aa8.23□□□□□ -1.09
CELF1-216ENST00000532146 ARIH1Q9Y4X5 557 aaPredicted RBP8.23□□□□□ -1.09
CELF1-216ENST00000532146 PTGER2P43116 358 aa8.22□□□□□ -1.09
CELF1-216ENST00000532146 ZNF454Q8N9F8 522 aa8.22□□□□□ -1.09
CELF1-216ENST00000532146 PDIA6Q15084 440 aa8.21□□□□□ -1.1
CELF1-216ENST00000532146 PCDHGA10Q9Y5H3 936 aa8.2□□□□□ -1.1
CELF1-216ENST00000532146 PSDA5PKW4 1024 aaPredicted RBP8.19□□□□□ -1.1
CELF1-216ENST00000532146 RB1CC1Q8TDY2 1594 aa8.18□□□□□ -1.1
CELF1-216ENST00000532146 PSEN2P49810 448 aa8.18□□□□□ -1.1
CELF1-216ENST00000532146 PPP4R3BQ5MIZ7 849 aa8.18□□□□□ -1.1
CELF1-216ENST00000532146 DDX12PQ92771 950 aa8.18□□□□□ -1.1
CELF1-216ENST00000532146 JPH4Q96JJ6 628 aa8.18□□□□□ -1.1
CELF1-216ENST00000532146 ADAM33Q9BZ11 813 aa8.18□□□□□ -1.1
CELF1-216ENST00000532146 DMRTA1Q5VZB9 504 aa8.17□□□□□ -1.1
CELF1-216ENST00000532146 PRIM1P49642 420 aaKnown RBP8.16□□□□□ -1.1
CELF1-216ENST00000532146 RSF1Q96T23 1441 aaPredicted RBP8.16□□□□□ -1.1
CELF1-216ENST00000532146 UNC13AQ9UPW8 1703 aa8.16□□□□□ -1.1
CELF1-216ENST00000532146 SPDYE16A6NNV3 312 aaPredicted RBP8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms