RNA–Protein interactions for RNA: ENST00000532078.1

DEPDC7-204, Transcript of DEP domain containing 7, humanhuman

TSL 2

Gene DEPDC7, Length 1,118 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC7-204ENST00000532078 ARHGAP35Q9NRY4 1499 aa25.09■■□□□ 1.61
DEPDC7-204ENST00000532078 DENND4BO75064 1496 aaPredicted RBP25.08■■□□□ 1.6
DEPDC7-204ENST00000532078 RICTORQ6R327 1708 aa25.07■■□□□ 1.6
DEPDC7-204ENST00000532078 AKNAQ7Z591 1439 aa25.07■■□□□ 1.6
DEPDC7-204ENST00000532078 ARHGEF40Q8TER5 1519 aa25.07■■□□□ 1.6
DEPDC7-204ENST00000532078 ADAMTSL3P82987 1691 aa25.04■■□□□ 1.6
DEPDC7-204ENST00000532078 ZMYM4Q5VZL5 1548 aa25.01■■□□□ 1.59
DEPDC7-204ENST00000532078 BCORL1Q5H9F3 1711 aa25■■□□□ 1.59
DEPDC7-204ENST00000532078 ATP1B4Q9UN42 357 aaPredicted RBP25■■□□□ 1.59
DEPDC7-204ENST00000532078 PLCH2O75038 1416 aa24.97■■□□□ 1.59
DEPDC7-204ENST00000532078 CDK11AQ9UQ88 783 aaPredicted RBP24.97■■□□□ 1.59
DEPDC7-204ENST00000532078 PTPRMP28827 1452 aa24.96■■□□□ 1.59
DEPDC7-204ENST00000532078 ARID4BQ4LE39 1312 aaPredicted RBP24.96■■□□□ 1.59
DEPDC7-204ENST00000532078 MYO5CQ9NQX4 1742 aa24.96■■□□□ 1.59
DEPDC7-204ENST00000532078 KIF14Q15058 1648 aa24.96■■□□□ 1.59
DEPDC7-204ENST00000532078 MADDQ8WXG6 1647 aa24.94■■□□□ 1.58
DEPDC7-204ENST00000532078 ZFYVE16Q7Z3T8 1539 aa24.94■■□□□ 1.58
DEPDC7-204ENST00000532078 MAGI2Q86UL8 1455 aa24.92■■□□□ 1.58
DEPDC7-204ENST00000532078 TROQ12816 1431 aaPredicted RBP24.92■■□□□ 1.58
DEPDC7-204ENST00000532078 POGZQ7Z3K3 1410 aa24.92■■□□□ 1.58
DEPDC7-204ENST00000532078 CLIP1P30622 1438 aa24.91■■□□□ 1.58
DEPDC7-204ENST00000532078 LRRIQ1Q96JM4 1722 aa24.9■■□□□ 1.58
DEPDC7-204ENST00000532078 SLC4A1APQ9BWU0 796 aaKnown RBP24.9■■□□□ 1.58
DEPDC7-204ENST00000532078 SCAPERQ9BY12 1400 aa24.89■■□□□ 1.58
DEPDC7-204ENST00000532078 YEATS2Q9ULM3 1422 aa24.87■■□□□ 1.57
DEPDC7-204ENST00000532078 PCF11O94913 1555 aaKnown RBP24.87■■□□□ 1.57
DEPDC7-204ENST00000532078 EFCAB2Q5VUJ9 269 aa24.86■■□□□ 1.57
DEPDC7-204ENST00000532078 RIMS1Q86UR5 1692 aaKnown RBP24.85■■□□□ 1.57
DEPDC7-204ENST00000532078 CCDC18Q5T9S5 1454 aa24.85■■□□□ 1.57
DEPDC7-204ENST00000532078 CASKIN1Q8WXD9 1431 aa24.85■■□□□ 1.57
DEPDC7-204ENST00000532078 ARHGAP5Q13017 1502 aa24.83■■□□□ 1.57
DEPDC7-204ENST00000532078 SIGLEC1Q9BZZ2 1709 aa24.81■■□□□ 1.56
DEPDC7-204ENST00000532078 ZNF518AQ6AHZ1 1483 aa24.8■■□□□ 1.56
DEPDC7-204ENST00000532078 FYCO1Q9BQS8 1478 aa24.78■■□□□ 1.56
DEPDC7-204ENST00000532078 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.78■■□□□ 1.56
DEPDC7-204ENST00000532078 ILDR1Q86SU0 546 aaPredicted RBP24.77■■□□□ 1.56
DEPDC7-204ENST00000532078 PREX2Q70Z35 1606 aa24.76■■□□□ 1.55
DEPDC7-204ENST00000532078 C9orf84Q5VXU9 1444 aa24.76■■□□□ 1.55
DEPDC7-204ENST00000532078 ATP10AO60312 1499 aa24.76■■□□□ 1.55
DEPDC7-204ENST00000532078 KDM5CP41229 1560 aa24.76■■□□□ 1.55
DEPDC7-204ENST00000532078 CDC42BPBQ9Y5S2 1711 aa24.75■■□□□ 1.55
DEPDC7-204ENST00000532078 FER1L4A9Z1Z3 1794 aa24.74■■□□□ 1.55
DEPDC7-204ENST00000532078 LMTK3Q96Q04 1460 aa24.73■■□□□ 1.55
DEPDC7-204ENST00000532078 ABCC1P33527 1531 aa24.69■■□□□ 1.54
DEPDC7-204ENST00000532078 ARHGEF12Q9NZN5 1544 aa24.69■■□□□ 1.54
DEPDC7-204ENST00000532078 MLECQ14165 292 aa24.68■■□□□ 1.54
DEPDC7-204ENST00000532078 AFAP1Q8N556 730 aa24.66■■□□□ 1.54
DEPDC7-204ENST00000532078 DIP2CQ9Y2E4 1556 aa24.66■■□□□ 1.54
DEPDC7-204ENST00000532078 CDC42BPAQ5VT25 1732 aa24.66■■□□□ 1.54
DEPDC7-204ENST00000532078 ITSN2Q9NZM3 1697 aa24.66■■□□□ 1.54
DEPDC7-204ENST00000532078 REREQ9P2R6 1566 aa24.64■■□□□ 1.54
DEPDC7-204ENST00000532078 MLH3Q9UHC1 1453 aa24.64■■□□□ 1.53
DEPDC7-204ENST00000532078 ABCA6Q8N139 1617 aa24.62■■□□□ 1.53
DEPDC7-204ENST00000532078 MYT1LQ9UL68 1186 aa24.62■■□□□ 1.53
DEPDC7-204ENST00000532078 RNF39Q9H2S5 420 aa24.6■■□□□ 1.53
DEPDC7-204ENST00000532078 TRAPPC8Q9Y2L5 1435 aa24.6■■□□□ 1.53
DEPDC7-204ENST00000532078 SAMD9LQ8IVG5 1584 aa24.54■■□□□ 1.52
DEPDC7-204ENST00000532078 PREX1Q8TCU6 1659 aa24.54■■□□□ 1.52
DEPDC7-204ENST00000532078 SLC4A2P04920 1241 aa24.54■■□□□ 1.52
DEPDC7-204ENST00000532078 AGLP35573 1532 aa24.54■■□□□ 1.52
DEPDC7-204ENST00000532078 GPATCH8Q9UKJ3 1502 aaKnown RBP24.54■■□□□ 1.52
DEPDC7-204ENST00000532078 KIDINS220Q9ULH0 1771 aa24.54■■□□□ 1.52
DEPDC7-204ENST00000532078 HSPA2P54652 639 aa24.53■■□□□ 1.52
DEPDC7-204ENST00000532078 SYCP2Q9BX26 1530 aa24.52■■□□□ 1.52
DEPDC7-204ENST00000532078 ZNF777Q9ULD5 760 aaPredicted RBP24.5■■□□□ 1.51
DEPDC7-204ENST00000532078 MTUS2Q5JR59 1369 aa24.5■■□□□ 1.51
DEPDC7-204ENST00000532078 PLEKHH2Q8IVE3 1493 aa24.49■■□□□ 1.51
DEPDC7-204ENST00000532078 CCNB3Q8WWL7 1395 aa24.48■■□□□ 1.51
DEPDC7-204ENST00000532078 EHBP1L1Q8N3D4 1523 aa24.46■■□□□ 1.51
DEPDC7-204ENST00000532078 CEP162Q5TB80 1403 aa24.46■■□□□ 1.51
DEPDC7-204ENST00000532078 FBXO41Q8TF61 875 aa24.46■■□□□ 1.51
DEPDC7-204ENST00000532078 KIAA1107Q9UPP5 1409 aa24.45■■□□□ 1.51
DEPDC7-204ENST00000532078 CEBPAP49715 358 aaPredicted RBP24.45■■□□□ 1.5
DEPDC7-204ENST00000532078 CFDP1Q9UEE9 299 aaPredicted RBP24.44■■□□□ 1.5
DEPDC7-204ENST00000532078 C3P01024 1663 aa24.43■■□□□ 1.5
DEPDC7-204ENST00000532078 SPAG9O60271 1321 aaKnown RBP24.43■■□□□ 1.5
DEPDC7-204ENST00000532078 ESF1Q9H501 851 aaKnown RBP24.43■■□□□ 1.5
DEPDC7-204ENST00000532078 ATP7AQ04656 1500 aa24.43■■□□□ 1.5
DEPDC7-204ENST00000532078 UHRF1BP1Q6BDS2 1440 aa24.43■■□□□ 1.5
DEPDC7-204ENST00000532078 INO80Q9ULG1 1556 aaPredicted RBP24.42■■□□□ 1.5
DEPDC7-204ENST00000532078 TIAM1Q13009 1591 aa24.42■■□□□ 1.5
DEPDC7-204ENST00000532078 CNTLNQ9NXG0 1405 aa24.41■■□□□ 1.5
DEPDC7-204ENST00000532078 HNRNPMP52272 730 aaKnown RBP eCLIP24.4■■□□□ 1.5
DEPDC7-204ENST00000532078 SETD1BQ9UPS6 1966 aaKnown RBP24.39■■□□□ 1.49
DEPDC7-204ENST00000532078 PLXNC1O60486 1568 aa24.36■■□□□ 1.49
DEPDC7-204ENST00000532078 SUPT6HQ7KZ85 1726 aaKnown RBP24.35■■□□□ 1.49
DEPDC7-204ENST00000532078 MROH2AA6NES4 1674 aa24.35■■□□□ 1.49
DEPDC7-204ENST00000532078 C1QBPQ07021 282 aaKnown RBP24.33■■□□□ 1.49
DEPDC7-204ENST00000532078 A2MP01023 1474 aa24.32■■□□□ 1.48
DEPDC7-204ENST00000532078 ADGBQ8N7X0 1667 aa24.31■■□□□ 1.48
DEPDC7-204ENST00000532078 STRCQ7RTU9 1775 aa24.3■■□□□ 1.48
DEPDC7-204ENST00000532078 U3KPZ7 1027 aaPredicted RBP24.3■■□□□ 1.48
DEPDC7-204ENST00000532078 MBD5Q9P267 1494 aa24.28■■□□□ 1.48
DEPDC7-204ENST00000532078 NPATQ14207 1427 aa24.27■■□□□ 1.48
DEPDC7-204ENST00000532078 ZNF644Q9H582 1327 aaPredicted RBP24.27■■□□□ 1.48
DEPDC7-204ENST00000532078 NCOA2Q15596 1464 aa24.26■■□□□ 1.47
DEPDC7-204ENST00000532078 CLTCQ00610 1675 aaKnown RBP24.25■■□□□ 1.47
DEPDC7-204ENST00000532078 RTEL1-TNFRSF6BF6WH68 1400 aa24.24■■□□□ 1.47
DEPDC7-204ENST00000532078 CERKQ8TCT0 537 aa24.23■■□□□ 1.47
DEPDC7-204ENST00000532078 ZMYM3Q14202 1370 aa24.23■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms