RNA–Protein interactions for RNA: ENST00000532066.1

TRIM44-202, Transcript of tripartite motif containing 44, humanhuman

TSL 4

Gene TRIM44, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM44-202ENST00000532066 SPDYE1Q8NFV5 336 aaPredicted RBP11.73□□□□□ -0.53
TRIM44-202ENST00000532066 SSUH2Q9Y2M2 353 aa11.73□□□□□ -0.53
TRIM44-202ENST00000532066 KIAA0556O60303 1618 aa11.72□□□□□ -0.53
TRIM44-202ENST00000532066 PHLDB1Q86UU1 1377 aa11.72□□□□□ -0.53
TRIM44-202ENST00000532066 ZNF692Q9BU19 519 aaPredicted RBP11.72□□□□□ -0.53
TRIM44-202ENST00000532066 DISP1Q96F81 1524 aa11.71□□□□□ -0.53
TRIM44-202ENST00000532066 CDK11AQ9UQ88 783 aaPredicted RBP11.71□□□□□ -0.53
TRIM44-202ENST00000532066 CEP170Q5SW79 1584 aa11.7□□□□□ -0.54
TRIM44-202ENST00000532066 EPRSP07814 1512 aaKnown RBP11.7□□□□□ -0.54
TRIM44-202ENST00000532066 FAM50AQ14320 339 aaKnown RBP11.69□□□□□ -0.54
TRIM44-202ENST00000532066 JPH4Q96JJ6 628 aa11.69□□□□□ -0.54
TRIM44-202ENST00000532066 FGD6Q6ZV73 1430 aa11.69□□□□□ -0.54
TRIM44-202ENST00000532066 SUPT6HQ7KZ85 1726 aaKnown RBP11.68□□□□□ -0.54
TRIM44-202ENST00000532066 NCOA2Q15596 1464 aa11.68□□□□□ -0.54
TRIM44-202ENST00000532066 MYOM3Q5VTT5 1437 aa11.67□□□□□ -0.54
TRIM44-202ENST00000532066 CLEC11AQ9Y240 323 aa11.66□□□□□ -0.54
TRIM44-202ENST00000532066 SETD5Q9C0A6 1442 aa11.66□□□□□ -0.54
TRIM44-202ENST00000532066 ARHGEF11O15085 1522 aa11.65□□□□□ -0.55
TRIM44-202ENST00000532066 MIA2Q96PC5 1412 aa11.64□□□□□ -0.55
TRIM44-202ENST00000532066 ITGAEP38570 1179 aa11.64□□□□□ -0.55
TRIM44-202ENST00000532066 RAPGEF6Q8TEU7 1601 aa11.64□□□□□ -0.55
TRIM44-202ENST00000532066 ACIN1Q9UKV3 1341 aaKnown RBP11.63□□□□□ -0.55
TRIM44-202ENST00000532066 PRKAR2AP13861 404 aaKnown RBP11.63□□□□□ -0.55
TRIM44-202ENST00000532066 DHX57Q6P158 1386 aaKnown RBP11.63□□□□□ -0.55
TRIM44-202ENST00000532066 NUP153P49790 1475 aaKnown RBP11.62□□□□□ -0.55
TRIM44-202ENST00000532066 RAB3GAP2Q9H2M9 1393 aa11.61□□□□□ -0.55
TRIM44-202ENST00000532066 LRRIQ1Q96JM4 1722 aa11.6□□□□□ -0.55
TRIM44-202ENST00000532066 TCOF1Q13428 1488 aaKnown RBP11.6□□□□□ -0.55
TRIM44-202ENST00000532066 EVX2Q03828 476 aa11.59□□□□□ -0.55
TRIM44-202ENST00000532066 CDK13Q14004 1512 aaKnown RBP11.59□□□□□ -0.55
TRIM44-202ENST00000532066 MAGI3Q5TCQ9 1506 aa11.58□□□□□ -0.56
TRIM44-202ENST00000532066 TROQ12816 1431 aaPredicted RBP11.58□□□□□ -0.56
TRIM44-202ENST00000532066 PRG4Q92954 1404 aaPredicted RBP11.58□□□□□ -0.56
TRIM44-202ENST00000532066 PTPRGP23470 1445 aa11.57□□□□□ -0.56
TRIM44-202ENST00000532066 PTPN23Q9H3S7 1636 aa11.57□□□□□ -0.56
TRIM44-202ENST00000532066 ABCA8O94911 1581 aa11.55□□□□□ -0.56
TRIM44-202ENST00000532066 HFM1A2PYH4 1435 aa11.55□□□□□ -0.56
TRIM44-202ENST00000532066 AKNAQ7Z591 1439 aa11.55□□□□□ -0.56
TRIM44-202ENST00000532066 PLEKHD1A6NEE1 506 aa11.55□□□□□ -0.56
TRIM44-202ENST00000532066 TIMELESSQ9UNS1 1208 aa11.55□□□□□ -0.56
TRIM44-202ENST00000532066 PLB1Q6P1J6 1458 aa11.55□□□□□ -0.56
TRIM44-202ENST00000532066 SHROOM2Q13796 1616 aa11.53□□□□□ -0.56
TRIM44-202ENST00000532066 CHD1O14646 1710 aa11.52□□□□□ -0.56
TRIM44-202ENST00000532066 ZNF316A6NFI3 1004 aaPredicted RBP11.52□□□□□ -0.57
TRIM44-202ENST00000532066 C19orf67A6NJJ6 358 aa11.51□□□□□ -0.57
TRIM44-202ENST00000532066 ADCY10Q96PN6 1610 aa11.5□□□□□ -0.57
TRIM44-202ENST00000532066 ARID3CA6NKF2 412 aa11.5□□□□□ -0.57
TRIM44-202ENST00000532066 ROCK1Q13464 1354 aa11.5□□□□□ -0.57
TRIM44-202ENST00000532066 UACAQ9BZF9 1416 aa11.5□□□□□ -0.57
TRIM44-202ENST00000532066 ATP10BO94823 1461 aa11.5□□□□□ -0.57
TRIM44-202ENST00000532066 NAIPQ13075 1403 aa11.49□□□□□ -0.57
TRIM44-202ENST00000532066 PRR29P0C7W0 189 aa11.48□□□□□ -0.57
TRIM44-202ENST00000532066 CFDP1Q9UEE9 299 aaPredicted RBP11.48□□□□□ -0.57
TRIM44-202ENST00000532066 PTPRKQ15262 1439 aa11.48□□□□□ -0.57
TRIM44-202ENST00000532066 ITSN2Q9NZM3 1697 aa11.48□□□□□ -0.57
TRIM44-202ENST00000532066 CLASP1Q7Z460 1538 aa11.47□□□□□ -0.57
TRIM44-202ENST00000532066 KIF14Q15058 1648 aa11.46□□□□□ -0.57
TRIM44-202ENST00000532066 GPATCH8Q9UKJ3 1502 aaKnown RBP11.45□□□□□ -0.58
TRIM44-202ENST00000532066 DAPK1P53355 1430 aa11.45□□□□□ -0.58
TRIM44-202ENST00000532066 CHADLQ6NUI6 762 aa11.45□□□□□ -0.58
TRIM44-202ENST00000532066 MAPKBP1O60336 1514 aa11.45□□□□□ -0.58
TRIM44-202ENST00000532066 DNMT1P26358 1616 aaKnown RBP11.44□□□□□ -0.58
TRIM44-202ENST00000532066 UHRF1BP1LA0JNW5 1464 aa11.44□□□□□ -0.58
TRIM44-202ENST00000532066 DIEXFQ68CQ4 756 aaKnown RBP11.43□□□□□ -0.58
TRIM44-202ENST00000532066 ABCC2Q92887 1545 aa11.43□□□□□ -0.58
TRIM44-202ENST00000532066 ABCC10Q5T3U5 1492 aa11.43□□□□□ -0.58
TRIM44-202ENST00000532066 ABCC5O15440 1437 aa11.43□□□□□ -0.58
TRIM44-202ENST00000532066 RSPH4AQ5TD94 716 aa11.42□□□□□ -0.58
TRIM44-202ENST00000532066 GCC2Q8IWJ2 1684 aa11.42□□□□□ -0.58
TRIM44-202ENST00000532066 CAMSAP2Q08AD1 1489 aa11.41□□□□□ -0.58
TRIM44-202ENST00000532066 RRP7BPQ9NSQ0 103 aa11.41□□□□□ -0.58
TRIM44-202ENST00000532066 CHIC2Q9UKJ5 165 aa11.41□□□□□ -0.58
TRIM44-202ENST00000532066 ANKRD30AQ9BXX3 1397 aa11.39□□□□□ -0.59
TRIM44-202ENST00000532066 ADGRL2O95490 1459 aa11.38□□□□□ -0.59
TRIM44-202ENST00000532066 SHANK2Q9UPX8 1470 aa11.38□□□□□ -0.59
TRIM44-202ENST00000532066 ZNF644Q9H582 1327 aaPredicted RBP11.37□□□□□ -0.59
TRIM44-202ENST00000532066 TSPY4P0CV99 314 aa11.37□□□□□ -0.59
TRIM44-202ENST00000532066 TSPY10P0CW01 314 aa11.37□□□□□ -0.59
TRIM44-202ENST00000532066 TRIM52Q96A61 297 aa11.37□□□□□ -0.59
TRIM44-202ENST00000532066 ZNF777Q9ULD5 760 aaPredicted RBP11.37□□□□□ -0.59
TRIM44-202ENST00000532066 PLEKHH2Q8IVE3 1493 aa11.37□□□□□ -0.59
TRIM44-202ENST00000532066 NCOA1Q15788 1441 aa11.35□□□□□ -0.59
TRIM44-202ENST00000532066 KDM5BQ9UGL1 1544 aa11.35□□□□□ -0.59
TRIM44-202ENST00000532066 GABBR2O75899 941 aa11.35□□□□□ -0.59
TRIM44-202ENST00000532066 NEUROD1Q13562 356 aa11.35□□□□□ -0.59
TRIM44-202ENST00000532066 TONSLQ96HA7 1378 aa11.35□□□□□ -0.59
TRIM44-202ENST00000532066 ARHGEF5Q12774 1597 aa11.34□□□□□ -0.59
TRIM44-202ENST00000532066 ERCC6L2Q5T890 1561 aa11.34□□□□□ -0.59
TRIM44-202ENST00000532066 ADGBQ8N7X0 1667 aa11.33□□□□□ -0.6
TRIM44-202ENST00000532066 CDC42BPAQ5VT25 1732 aa11.33□□□□□ -0.6
TRIM44-202ENST00000532066 PPP1R15AO75807 674 aaPredicted RBP11.33□□□□□ -0.6
TRIM44-202ENST00000532066 SIN3AQ96ST3 1273 aa11.33□□□□□ -0.6
TRIM44-202ENST00000532066 MPHOSPH9Q99550 1183 aa11.33□□□□□ -0.6
TRIM44-202ENST00000532066 KIAA1107Q9UPP5 1409 aa11.32□□□□□ -0.6
TRIM44-202ENST00000532066 PREX2Q70Z35 1606 aa11.31□□□□□ -0.6
TRIM44-202ENST00000532066 CROCC2H7BZ55 1655 aa11.31□□□□□ -0.6
TRIM44-202ENST00000532066 FARP1Q9Y4F1 1045 aaPredicted RBP11.31□□□□□ -0.6
TRIM44-202ENST00000532066 C9orf84Q5VXU9 1444 aa11.31□□□□□ -0.6
TRIM44-202ENST00000532066 CCDC141Q6ZP82 1450 aa11.31□□□□□ -0.6
TRIM44-202ENST00000532066 EFCAB2Q5VUJ9 269 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms