RNA–Protein interactions for RNA: ENST00000532024.1

PPFIA1-220, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 3

Gene PPFIA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-220ENST00000532024 ARHGAP5Q13017 1502 aa18.42■□□□□ 0.54
PPFIA1-220ENST00000532024 KANK4Q5T7N3 995 aaPredicted RBP18.39■□□□□ 0.53
PPFIA1-220ENST00000532024 EFCAB2Q5VUJ9 269 aa18.39■□□□□ 0.53
PPFIA1-220ENST00000532024 CDC42BPAQ5VT25 1732 aa18.39■□□□□ 0.53
PPFIA1-220ENST00000532024 KDM6BO15054 1643 aa18.38■□□□□ 0.53
PPFIA1-220ENST00000532024 GPATCH8Q9UKJ3 1502 aaKnown RBP18.37■□□□□ 0.53
PPFIA1-220ENST00000532024 CDC42BPBQ9Y5S2 1711 aa18.36■□□□□ 0.53
PPFIA1-220ENST00000532024 AKNAQ7Z591 1439 aa18.34■□□□□ 0.53
PPFIA1-220ENST00000532024 CFDP1Q9UEE9 299 aaPredicted RBP18.34■□□□□ 0.53
PPFIA1-220ENST00000532024 ADGRL1O94910 1474 aa18.33■□□□□ 0.52
PPFIA1-220ENST00000532024 PLEKHH2Q8IVE3 1493 aa18.32■□□□□ 0.52
PPFIA1-220ENST00000532024 MYOM3Q5VTT5 1437 aa18.32■□□□□ 0.52
PPFIA1-220ENST00000532024 DENND4BO75064 1496 aaPredicted RBP18.29■□□□□ 0.52
PPFIA1-220ENST00000532024 ZNF777Q9ULD5 760 aaPredicted RBP18.29■□□□□ 0.52
PPFIA1-220ENST00000532024 MIA2Q96PC5 1412 aa18.28■□□□□ 0.52
PPFIA1-220ENST00000532024 ABCC1P33527 1531 aa18.28■□□□□ 0.52
PPFIA1-220ENST00000532024 SCAPERQ9BY12 1400 aa18.27■□□□□ 0.52
PPFIA1-220ENST00000532024 SAMD9LQ8IVG5 1584 aa18.26■□□□□ 0.51
PPFIA1-220ENST00000532024 POGZQ7Z3K3 1410 aa18.24■□□□□ 0.51
PPFIA1-220ENST00000532024 CAMSAP2Q08AD1 1489 aa18.24■□□□□ 0.51
PPFIA1-220ENST00000532024 ZNF518AQ6AHZ1 1483 aa18.24■□□□□ 0.51
PPFIA1-220ENST00000532024 KIAA1107Q9UPP5 1409 aa18.23■□□□□ 0.51
PPFIA1-220ENST00000532024 COL17A1Q9UMD9 1497 aaPredicted RBP18.23■□□□□ 0.51
PPFIA1-220ENST00000532024 SYCP2Q9BX26 1530 aa18.23■□□□□ 0.51
PPFIA1-220ENST00000532024 FGD6Q6ZV73 1430 aa18.23■□□□□ 0.51
PPFIA1-220ENST00000532024 RICTORQ6R327 1708 aa18.22■□□□□ 0.51
PPFIA1-220ENST00000532024 PPARGC1BQ86YN6 1023 aaKnown RBP18.21■□□□□ 0.51
PPFIA1-220ENST00000532024 FRMPD1Q5SYB0 1578 aa18.2■□□□□ 0.5
PPFIA1-220ENST00000532024 PTPN23Q9H3S7 1636 aa18.2■□□□□ 0.5
PPFIA1-220ENST00000532024 ZMYM4Q5VZL5 1548 aa18.19■□□□□ 0.5
PPFIA1-220ENST00000532024 RAPGEF3O95398 923 aa18.19■□□□□ 0.5
PPFIA1-220ENST00000532024 MAGI2Q86UL8 1455 aa18.17■□□□□ 0.5
PPFIA1-220ENST00000532024 ARHGEF12Q9NZN5 1544 aa18.17■□□□□ 0.5
PPFIA1-220ENST00000532024 ZNF644Q9H582 1327 aaPredicted RBP18.17■□□□□ 0.5
PPFIA1-220ENST00000532024 KDM5CP41229 1560 aa18.17■□□□□ 0.5
PPFIA1-220ENST00000532024 CCDC141Q6ZP82 1450 aa18.16■□□□□ 0.5
PPFIA1-220ENST00000532024 RSPH4AQ5TD94 716 aa18.16■□□□□ 0.5
PPFIA1-220ENST00000532024 ARHGEF5Q12774 1597 aa18.16■□□□□ 0.5
PPFIA1-220ENST00000532024 TCOF1Q13428 1488 aaKnown RBP18.15■□□□□ 0.5
PPFIA1-220ENST00000532024 HNRNPMP52272 730 aaKnown RBP eCLIP18.15■□□□□ 0.55e-9■■■■■ 39.9
PPFIA1-220ENST00000532024 HECW2Q9P2P5 1572 aa18.15■□□□□ 0.5
PPFIA1-220ENST00000532024 TRAPPC8Q9Y2L5 1435 aa18.15■□□□□ 0.5
PPFIA1-220ENST00000532024 MYT1LQ9UL68 1186 aa18.14■□□□□ 0.49
PPFIA1-220ENST00000532024 ZFYVE16Q7Z3T8 1539 aa18.13■□□□□ 0.49
PPFIA1-220ENST00000532024 AFAP1Q8N556 730 aa18.13■□□□□ 0.49
PPFIA1-220ENST00000532024 MBD5Q9P267 1494 aa18.13■□□□□ 0.49
PPFIA1-220ENST00000532024 ARHGEF40Q8TER5 1519 aa18.13■□□□□ 0.49
PPFIA1-220ENST00000532024 SPAG9O60271 1321 aaKnown RBP18.12■□□□□ 0.49
PPFIA1-220ENST00000532024 MLH3Q9UHC1 1453 aa18.12■□□□□ 0.49
PPFIA1-220ENST00000532024 FAM50AQ14320 339 aaKnown RBP18.11■□□□□ 0.49
PPFIA1-220ENST00000532024 ILDR1Q86SU0 546 aaPredicted RBP18.11■□□□□ 0.49
PPFIA1-220ENST00000532024 TSPY4P0CV99 314 aa18.1■□□□□ 0.49
PPFIA1-220ENST00000532024 TSPY10P0CW01 314 aa18.1■□□□□ 0.49
PPFIA1-220ENST00000532024 ATP7AQ04656 1500 aa18.09■□□□□ 0.49
PPFIA1-220ENST00000532024 DNMT1P26358 1616 aaKnown RBP18.09■□□□□ 0.49
PPFIA1-220ENST00000532024 INO80Q9ULG1 1556 aaPredicted RBP18.08■□□□□ 0.49
PPFIA1-220ENST00000532024 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.07■□□□□ 0.48
PPFIA1-220ENST00000532024 SHANK2Q9UPX8 1470 aa18.07■□□□□ 0.48
PPFIA1-220ENST00000532024 RTEL1-TNFRSF6BF6WH68 1400 aa18.06■□□□□ 0.48
PPFIA1-220ENST00000532024 RRBP1Q9P2E9 1410 aaKnown RBP18.06■□□□□ 0.48
PPFIA1-220ENST00000532024 CROCC2H7BZ55 1655 aa18.06■□□□□ 0.48
PPFIA1-220ENST00000532024 DAPK1P53355 1430 aa18.06■□□□□ 0.48
PPFIA1-220ENST00000532024 MAST1Q9Y2H9 1570 aa18.05■□□□□ 0.48
PPFIA1-220ENST00000532024 KIDINS220Q9ULH0 1771 aa18.05■□□□□ 0.48
PPFIA1-220ENST00000532024 C9orf84Q5VXU9 1444 aa18.05■□□□□ 0.48
PPFIA1-220ENST00000532024 YEATS2Q9ULM3 1422 aa18.05■□□□□ 0.48
PPFIA1-220ENST00000532024 DIP2CQ9Y2E4 1556 aa18.04■□□□□ 0.48
PPFIA1-220ENST00000532024 ATP10AO60312 1499 aa18.03■□□□□ 0.48
PPFIA1-220ENST00000532024 ABCA6Q8N139 1617 aa18.03■□□□□ 0.48
PPFIA1-220ENST00000532024 ABCC5O15440 1437 aa18.02■□□□□ 0.48
PPFIA1-220ENST00000532024 ADGBQ8N7X0 1667 aa18.01■□□□□ 0.47
PPFIA1-220ENST00000532024 REREQ9P2R6 1566 aa18■□□□□ 0.47
PPFIA1-220ENST00000532024 PLXNC1O60486 1568 aa18■□□□□ 0.47
PPFIA1-220ENST00000532024 ARID4BQ4LE39 1312 aaPredicted RBP17.98■□□□□ 0.47
PPFIA1-220ENST00000532024 ANKRD30AQ9BXX3 1397 aa17.97■□□□□ 0.47
PPFIA1-220ENST00000532024 A2MP01023 1474 aa17.96■□□□□ 0.47
PPFIA1-220ENST00000532024 KDM4FA0A1W2PPD8 638 aa17.95■□□□□ 0.46
PPFIA1-220ENST00000532024 ADGRL2O95490 1459 aa17.95■□□□□ 0.46
PPFIA1-220ENST00000532024 ITGAEP38570 1179 aa17.94■□□□□ 0.46
PPFIA1-220ENST00000532024 AGLP35573 1532 aa17.93■□□□□ 0.46
PPFIA1-220ENST00000532024 CHIC2Q9UKJ5 165 aa17.93■□□□□ 0.46
PPFIA1-220ENST00000532024 DUOX2Q9NRD8 1548 aa17.93■□□□□ 0.46
PPFIA1-220ENST00000532024 KIF15Q9NS87 1388 aa17.92■□□□□ 0.46
PPFIA1-220ENST00000532024 ROCK1Q13464 1354 aa17.91■□□□□ 0.46
PPFIA1-220ENST00000532024 DHX29Q7Z478 1369 aaKnown RBP17.91■□□□□ 0.46
PPFIA1-220ENST00000532024 NCOA1Q15788 1441 aa17.9■□□□□ 0.46
PPFIA1-220ENST00000532024 EIF2AK4Q9P2K8 1649 aaKnown RBP17.89■□□□□ 0.45
PPFIA1-220ENST00000532024 ERBINQ96RT1 1412 aa17.89■□□□□ 0.45
PPFIA1-220ENST00000532024 RRP7BPQ9NSQ0 103 aa17.88■□□□□ 0.45
PPFIA1-220ENST00000532024 BCORL1Q5H9F3 1711 aa17.87■□□□□ 0.45
PPFIA1-220ENST00000532024 PTPRKQ15262 1439 aa17.87■□□□□ 0.45
PPFIA1-220ENST00000532024 SIGLEC1Q9BZZ2 1709 aa17.86■□□□□ 0.45
PPFIA1-220ENST00000532024 ESF1Q9H501 851 aaKnown RBP17.84■□□□□ 0.45
PPFIA1-220ENST00000532024 KIF3BO15066 747 aa17.83■□□□□ 0.44
PPFIA1-220ENST00000532024 MLECQ14165 292 aa17.83■□□□□ 0.44
PPFIA1-220ENST00000532024 ANKRD50Q9ULJ7 1429 aa17.82■□□□□ 0.44
PPFIA1-220ENST00000532024 ADAMTSL3P82987 1691 aa17.81■□□□□ 0.44
PPFIA1-220ENST00000532024 FAM135AQ9P2D6 1515 aa17.81■□□□□ 0.44
PPFIA1-220ENST00000532024 FER1L4A9Z1Z3 1794 aa17.81■□□□□ 0.44
PPFIA1-220ENST00000532024 GCC2Q8IWJ2 1684 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms