RNA–Protein interactions for RNA: ENST00000531867.1

PUM1-222, Transcript of pumilio RNA binding family member 1, human

TSL 4

Gene PUM1, Length 549 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PUM1-222	ENST00000531867	MICALL2	Q8IY33	904 aa		12.01	□□□□□ -0.49
PUM1-222	ENST00000531867	TMEM121B	Q9BXQ6	578 aa	Predicted RBP	12.01	□□□□□ -0.49
PUM1-222	ENST00000531867	SLAIN1	Q8ND83	568 aa		12	□□□□□ -0.49
PUM1-222	ENST00000531867	NKX1-1	Q15270	411 aa	Predicted RBP	11.99	□□□□□ -0.49
PUM1-222	ENST00000531867	SCRIB	Q14160	1630 aa		11.98	□□□□□ -0.49
PUM1-222	ENST00000531867	CUX2	O14529	1486 aa		11.98	□□□□□ -0.49
PUM1-222	ENST00000531867	ZCCHC6	Q5VYS8	1495 aa	Known RBP	11.98	□□□□□ -0.49
PUM1-222	ENST00000531867	BBX	Q8WY36	941 aa	Predicted RBP	11.94	□□□□□ -0.5
PUM1-222	ENST00000531867	SNPH	O15079	494 aa		11.89	□□□□□ -0.51
PUM1-222	ENST00000531867	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	11.89	□□□□□ -0.51
PUM1-222	ENST00000531867	GTPBP6	O43824	516 aa	Predicted RBP	11.88	□□□□□ -0.51
PUM1-222	ENST00000531867	PPP1R37	O75864	691 aa		11.88	□□□□□ -0.51
PUM1-222	ENST00000531867	TMEM92	Q6UXU6	159 aa		11.81	□□□□□ -0.52
PUM1-222	ENST00000531867	TMC2	Q8TDI7	906 aa		11.79	□□□□□ -0.52
PUM1-222	ENST00000531867	SPRYD3	Q8NCJ5	442 aa		11.78	□□□□□ -0.52
PUM1-222	ENST00000531867	KIF3C	O14782	793 aa		11.76	□□□□□ -0.53
PUM1-222	ENST00000531867	DOK7	Q18PE1	504 aa		11.76	□□□□□ -0.53
PUM1-222	ENST00000531867	FAM163A	Q96GL9	167 aa	Predicted RBP	11.76	□□□□□ -0.53
PUM1-222	ENST00000531867	ERCC6	Q03468	1493 aa		11.76	□□□□□ -0.53
PUM1-222	ENST00000531867	C2orf72	A6NCS6	295 aa		11.75	□□□□□ -0.53
PUM1-222	ENST00000531867	RIMBP2	O15034	1052 aa		11.72	□□□□□ -0.53
PUM1-222	ENST00000531867	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	11.71	□□□□□ -0.53
PUM1-222	ENST00000531867	NCAPD3	P42695	1498 aa		11.7	□□□□□ -0.54
PUM1-222	ENST00000531867	GPHN	Q9NQX3	736 aa	Predicted RBP	11.7	□□□□□ -0.54
PUM1-222	ENST00000531867	ST18	O60284	1047 aa		11.69	□□□□□ -0.54
PUM1-222	ENST00000531867	SLC24A1	O60721	1099 aa		11.69	□□□□□ -0.54
PUM1-222	ENST00000531867	HOXB3	P14651	431 aa	Predicted RBP	11.69	□□□□□ -0.54
PUM1-222	ENST00000531867	ZNF710	Q8N1W2	664 aa		11.69	□□□□□ -0.54
PUM1-222	ENST00000531867	CFAP44	Q96MT7	982 aa		11.69	□□□□□ -0.54
PUM1-222	ENST00000531867	LCE2D	Q5TA82	110 aa	Predicted RBP	11.68	□□□□□ -0.54
PUM1-222	ENST00000531867	CRISPLD2	Q9H0B8	497 aa		11.68	□□□□□ -0.54
PUM1-222	ENST00000531867	ZSWIM6	Q9HCJ5	1215 aa		11.68	□□□□□ -0.54
PUM1-222	ENST00000531867	PDE4A	P27815	886 aa		11.67	□□□□□ -0.54
PUM1-222	ENST00000531867	FOXK1	P85037	733 aa		11.67	□□□□□ -0.54
PUM1-222	ENST00000531867	NCKAP5L	Q9HCH0	1330 aa		11.61	□□□□□ -0.55
PUM1-222	ENST00000531867	POTEM	A6NI47	508 aa		11.61	□□□□□ -0.55
PUM1-222	ENST00000531867	SLC34A2	O95436	690 aa		11.61	□□□□□ -0.55
PUM1-222	ENST00000531867	DSG2	Q14126	1118 aa		11.61	□□□□□ -0.55
PUM1-222	ENST00000531867	PLPP6	Q8IY26	295 aa		11.61	□□□□□ -0.55
PUM1-222	ENST00000531867	THOC2	Q8NI27	1593 aa	Known RBP	11.6	□□□□□ -0.55
PUM1-222	ENST00000531867	POTEG	Q6S5H5	508 aa		11.6	□□□□□ -0.55
PUM1-222	ENST00000531867	NES	P48681	1621 aa		11.6	□□□□□ -0.55
PUM1-222	ENST00000531867	HOXB1	P14653	301 aa	Predicted RBP	11.59	□□□□□ -0.55
PUM1-222	ENST00000531867	PPP1R15B	Q5SWA1	713 aa		11.59	□□□□□ -0.55
PUM1-222	ENST00000531867	DDX27	Q96GQ7	796 aa	Known RBP	11.58	□□□□□ -0.56
PUM1-222	ENST00000531867	LARP6	Q9BRS8	491 aa	Known RBP	11.58	□□□□□ -0.56
PUM1-222	ENST00000531867	ATAD2B	Q9ULI0	1458 aa		11.57	□□□□□ -0.56
PUM1-222	ENST00000531867	EMP3	P54852	163 aa		11.57	□□□□□ -0.56
PUM1-222	ENST00000531867	MFSD10	Q14728	455 aa		11.57	□□□□□ -0.56
PUM1-222	ENST00000531867	CADPS2	Q86UW7	1296 aa		11.57	□□□□□ -0.56
PUM1-222	ENST00000531867	HMGXB3	Q12766	1538 aa		11.56	□□□□□ -0.56
PUM1-222	ENST00000531867	GPR153	Q6NV75	609 aa		11.54	□□□□□ -0.56
PUM1-222	ENST00000531867	PTCD2	Q8WV60	388 aa	Known RBP	11.53	□□□□□ -0.56
PUM1-222	ENST00000531867	MARVELD3	Q96A59	401 aa		11.53	□□□□□ -0.56
PUM1-222	ENST00000531867	TBC1D12	O60347	775 aa		11.51	□□□□□ -0.57
PUM1-222	ENST00000531867	PLCB2	Q00722	1185 aa		11.51	□□□□□ -0.57
PUM1-222	ENST00000531867	ARSI	Q5FYB1	569 aa		11.51	□□□□□ -0.57
PUM1-222	ENST00000531867	PCDHGA4	Q9Y5G9	962 aa		11.51	□□□□□ -0.57
PUM1-222	ENST00000531867	SMARCA2	P51531	1590 aa		11.5	□□□□□ -0.57
PUM1-222	ENST00000531867	PCDH10	Q9P2E7	1040 aa		11.49	□□□□□ -0.57
PUM1-222	ENST00000531867	LAMC3	Q9Y6N6	1575 aa		11.48	□□□□□ -0.57
PUM1-222	ENST00000531867	ERBB3	P21860	1342 aa		11.46	□□□□□ -0.57
PUM1-222	ENST00000531867	OXER1	Q8TDS5	423 aa		11.46	□□□□□ -0.57
PUM1-222	ENST00000531867	FAM205C	A6NFA0	338 aa		11.45	□□□□□ -0.58
PUM1-222	ENST00000531867	WDR70	Q9NW82	654 aa		11.45	□□□□□ -0.58
PUM1-222	ENST00000531867	SMARCA4	P51532	1647 aa		11.45	□□□□□ -0.58
PUM1-222	ENST00000531867	KIF21A	Q7Z4S6	1674 aa		11.44	□□□□□ -0.58
PUM1-222	ENST00000531867	NUDT7	P0C024	238 aa		11.44	□□□□□ -0.58
PUM1-222	ENST00000531867	UPF1	Q92900	1129 aa	Known RBP eCLIP	11.44	□□□□□ -0.58
PUM1-222	ENST00000531867	KHSRP	Q92945	711 aa	Known RBP eCLIP	11.44	□□□□□ -0.58	8e-7	■□□□□ 9.1
PUM1-222	ENST00000531867	HS3ST6	Q96QI5	342 aa		11.44	□□□□□ -0.58
PUM1-222	ENST00000531867	ZNF316	A6NFI3	1004 aa	Predicted RBP	11.43	□□□□□ -0.58
PUM1-222	ENST00000531867	TSHZ2	Q9NRE2	1034 aa		11.43	□□□□□ -0.58
PUM1-222	ENST00000531867	CAMK2B	Q13554	666 aa		11.42	□□□□□ -0.58
PUM1-222	ENST00000531867	PDS5B	Q9NTI5	1447 aa		11.41	□□□□□ -0.58
PUM1-222	ENST00000531867	PSD	A5PKW4	1024 aa	Predicted RBP	11.4	□□□□□ -0.58
PUM1-222	ENST00000531867	VARS2	Q5ST30	1063 aa	Known RBP	11.4	□□□□□ -0.58
PUM1-222	ENST00000531867	CDAN1	Q8IWY9	1227 aa		11.4	□□□□□ -0.58
PUM1-222	ENST00000531867	PEG3	Q9GZU2	1588 aa		11.4	□□□□□ -0.58
PUM1-222	ENST00000531867	BAZ1B	Q9UIG0	1483 aa	Known RBP	11.39	□□□□□ -0.59
PUM1-222	ENST00000531867	MAP3K9	P80192	1104 aa		11.38	□□□□□ -0.59
PUM1-222	ENST00000531867	KDM4F	A0A1W2PPD8	638 aa		11.37	□□□□□ -0.59
PUM1-222	ENST00000531867	EMILIN3	Q9NT22	766 aa		11.37	□□□□□ -0.59
PUM1-222	ENST00000531867	LHX6	Q9UPM6	363 aa		11.37	□□□□□ -0.59
PUM1-222	ENST00000531867	E2F4	Q16254	413 aa		11.36	□□□□□ -0.59
PUM1-222	ENST00000531867	WDR62	O43379	1518 aa		11.35	□□□□□ -0.59
PUM1-222	ENST00000531867	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	11.34	□□□□□ -0.59
PUM1-222	ENST00000531867	POTEB3	A0JP26	581 aa		11.34	□□□□□ -0.59
PUM1-222	ENST00000531867	POTEB	Q6S5H4	581 aa		11.34	□□□□□ -0.59
PUM1-222	ENST00000531867	MRC2	Q9UBG0	1479 aa		11.33	□□□□□ -0.6
PUM1-222	ENST00000531867	HAP1	P54257	671 aa	Predicted RBP	11.33	□□□□□ -0.6
PUM1-222	ENST00000531867	ZNF687	Q8N1G0	1237 aa		11.33	□□□□□ -0.6
PUM1-222	ENST00000531867	EVI5	O60447	810 aa		11.32	□□□□□ -0.6
PUM1-222	ENST00000531867	PPP4R3B	Q5MIZ7	849 aa		11.3	□□□□□ -0.6
PUM1-222	ENST00000531867	ANO8	Q9HCE9	1232 aa	Predicted RBP	11.3	□□□□□ -0.6
PUM1-222	ENST00000531867	CADPS	Q9ULU8	1353 aa		11.29	□□□□□ -0.6
PUM1-222	ENST00000531867	DPYSL4	O14531	572 aa		11.29	□□□□□ -0.6
PUM1-222	ENST00000531867	ARIH1	Q9Y4X5	557 aa	Predicted RBP	11.29	□□□□□ -0.6
PUM1-222	ENST00000531867	PBX2	P40425	430 aa		11.28	□□□□□ -0.6
PUM1-222	ENST00000531867	SPDYE16	A6NNV3	312 aa	Predicted RBP	11.26	□□□□□ -0.61

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