RNA–Protein interactions for RNA: ENST00000531594.1

RC3H1-206, Transcript of ring finger and CCCH-type domains 1, humanhuman

TSL 3

Gene RC3H1, Length 303 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-206ENST00000531594 ZFP91Q96JP5 570 aaPredicted RBP6.27□□□□□ -1.41
RC3H1-206ENST00000531594 RIMBP2O15034 1052 aa6.26□□□□□ -1.41
RC3H1-206ENST00000531594 ANKRD13DQ6ZTN6 518 aa6.24□□□□□ -1.41
RC3H1-206ENST00000531594 ZSWIM6Q9HCJ5 1215 aa6.23□□□□□ -1.41
RC3H1-206ENST00000531594 RIOK3O14730 519 aaKnown RBP6.22□□□□□ -1.41
RC3H1-206ENST00000531594 POTEEQ6S8J3 1075 aa6.22□□□□□ -1.41
RC3H1-206ENST00000531594 ZNF316A6NFI3 1004 aaPredicted RBP6.2□□□□□ -1.42
RC3H1-206ENST00000531594 SOX12O15370 315 aa6.2□□□□□ -1.42
RC3H1-206ENST00000531594 FBXO22Q8NEZ5 403 aa6.2□□□□□ -1.42
RC3H1-206ENST00000531594 AXIN2Q9Y2T1 843 aa6.2□□□□□ -1.42
RC3H1-206ENST00000531594 LSM11P83369 360 aaKnown RBP eCLIP6.19□□□□□ -1.42
RC3H1-206ENST00000531594 NUDT7P0C024 238 aa6.18□□□□□ -1.42
RC3H1-206ENST00000531594 TRIM41Q8WV44 630 aa6.18□□□□□ -1.42
RC3H1-206ENST00000531594 C2orf72A6NCS6 295 aa6.17□□□□□ -1.42
RC3H1-206ENST00000531594 VGFO15240 615 aaPredicted RBP6.17□□□□□ -1.42
RC3H1-206ENST00000531594 KIF3CO14782 793 aa6.16□□□□□ -1.42
RC3H1-206ENST00000531594 MFRPQ9BY79 579 aa6.16□□□□□ -1.42
RC3H1-206ENST00000531594 BCL11BQ9C0K0 894 aaPredicted RBP6.16□□□□□ -1.42
RC3H1-206ENST00000531594 LHX6Q9UPM6 363 aa6.15□□□□□ -1.42
RC3H1-206ENST00000531594 PTGER2P43116 358 aa6.14□□□□□ -1.43
RC3H1-206ENST00000531594 NLRP6P59044 892 aa6.13□□□□□ -1.43
RC3H1-206ENST00000531594 STK24Q9Y6E0 443 aa6.12□□□□□ -1.43
RC3H1-206ENST00000531594 PCDHGA4Q9Y5G9 962 aa6.11□□□□□ -1.43
RC3H1-206ENST00000531594 PLA2G2EQ9NZK7 142 aa6.1□□□□□ -1.43
RC3H1-206ENST00000531594 PPP1R37O75864 691 aa6.08□□□□□ -1.44
RC3H1-206ENST00000531594 STK25O00506 426 aa6.07□□□□□ -1.44
RC3H1-206ENST00000531594 PBX2P40425 430 aa6.07□□□□□ -1.44
RC3H1-206ENST00000531594 DMRTA1Q5VZB9 504 aa6.07□□□□□ -1.44
RC3H1-206ENST00000531594 ADGRD1Q6QNK2 874 aa6.07□□□□□ -1.44
RC3H1-206ENST00000531594 KDM4FA0A1W2PPD8 638 aa6.06□□□□□ -1.44
RC3H1-206ENST00000531594 SLC34A2O95436 690 aa6.06□□□□□ -1.44
RC3H1-206ENST00000531594 PSEN2P49810 448 aa6.06□□□□□ -1.44
RC3H1-206ENST00000531594 ARHGAP33O14559 1287 aa6.03□□□□□ -1.44
RC3H1-206ENST00000531594 RGL2O15211 777 aa6.03□□□□□ -1.44
RC3H1-206ENST00000531594 HRO43593 1189 aa6.03□□□□□ -1.44
RC3H1-206ENST00000531594 HCSTQ9UBK5 93 aa6.03□□□□□ -1.44
RC3H1-206ENST00000531594 TMC2Q8TDI7 906 aa6.02□□□□□ -1.45
RC3H1-206ENST00000531594 KCTD12Q96CX2 325 aaKnown RBP6□□□□□ -1.45
RC3H1-206ENST00000531594 ECM2O94769 699 aaPredicted RBP5.99□□□□□ -1.45
RC3H1-206ENST00000531594 PKD2Q13563 968 aa5.99□□□□□ -1.45
RC3H1-206ENST00000531594 PTCD2Q8WV60 388 aaKnown RBP5.98□□□□□ -1.45
RC3H1-206ENST00000531594 TK2O00142 265 aa5.97□□□□□ -1.45
RC3H1-206ENST00000531594 DSG2Q14126 1118 aa5.96□□□□□ -1.46
RC3H1-206ENST00000531594 PLPP6Q8IY26 295 aa5.96□□□□□ -1.46
RC3H1-206ENST00000531594 KCNK17Q96T54 332 aa5.96□□□□□ -1.46
RC3H1-206ENST00000531594 TAOK2Q9UL54 1235 aa5.95□□□□□ -1.46
RC3H1-206ENST00000531594 PTPN5P54829 565 aa5.94□□□□□ -1.46
RC3H1-206ENST00000531594 FOXK1P85037 733 aa5.94□□□□□ -1.46
RC3H1-206ENST00000531594 PSDA5PKW4 1024 aaPredicted RBP5.93□□□□□ -1.46
RC3H1-206ENST00000531594 PPP4R3BQ5MIZ7 849 aa5.93□□□□□ -1.46
RC3H1-206ENST00000531594 VPS9D1Q9Y2B5 631 aa5.93□□□□□ -1.46
RC3H1-206ENST00000531594 GPHNQ9NQX3 736 aaPredicted RBP5.92□□□□□ -1.46
RC3H1-206ENST00000531594 UPF1Q92900 1129 aaKnown RBP eCLIP5.91□□□□□ -1.46
RC3H1-206ENST00000531594 THSD4Q6ZMP0 1018 aa5.88□□□□□ -1.47
RC3H1-206ENST00000531594 ZNF454Q8N9F8 522 aa5.88□□□□□ -1.47
RC3H1-206ENST00000531594 OXER1Q8TDS5 423 aa5.88□□□□□ -1.47
RC3H1-206ENST00000531594 BHMG1C9JSJ3 638 aaPredicted RBP5.87□□□□□ -1.47
RC3H1-206ENST00000531594 STAC3Q96MF2 364 aa5.86□□□□□ -1.47
RC3H1-206ENST00000531594 BCL2L12Q9HB09 334 aa5.86□□□□□ -1.47
RC3H1-206ENST00000531594 A0A0G2JS52 829 aa5.85□□□□□ -1.47
RC3H1-206ENST00000531594 NKX1-1Q15270 411 aaPredicted RBP5.85□□□□□ -1.47
RC3H1-206ENST00000531594 ZBED2Q9BTP6 218 aa5.85□□□□□ -1.47
RC3H1-206ENST00000531594 FOSBP53539 338 aa5.84□□□□□ -1.47
RC3H1-206ENST00000531594 IRX2Q9BZI1 471 aaPredicted RBP5.84□□□□□ -1.47
RC3H1-206ENST00000531594 TBC1D12O60347 775 aa5.83□□□□□ -1.48
RC3H1-206ENST00000531594 HS6ST3Q8IZP7 471 aa5.83□□□□□ -1.48
RC3H1-206ENST00000531594 WNT2BQ93097 391 aa5.83□□□□□ -1.48
RC3H1-206ENST00000531594 ADAM33Q9BZ11 813 aa5.83□□□□□ -1.48
RC3H1-206ENST00000531594 CRISPLD2Q9H0B8 497 aa5.83□□□□□ -1.48
RC3H1-206ENST00000531594 IFFO2Q5TF58 517 aa5.82□□□□□ -1.48
RC3H1-206ENST00000531594 SLC4A5Q9BY07 1137 aa5.82□□□□□ -1.48
RC3H1-206ENST00000531594 NCKAP5LQ9HCH0 1330 aa5.81□□□□□ -1.48
RC3H1-206ENST00000531594 PPP1R15BQ5SWA1 713 aa5.81□□□□□ -1.48
RC3H1-206ENST00000531594 KCNH8Q96L42 1107 aa5.81□□□□□ -1.48
RC3H1-206ENST00000531594 PTPREP23469 700 aa5.8□□□□□ -1.48
RC3H1-206ENST00000531594 PROX2Q3B8N5 592 aa5.8□□□□□ -1.48
RC3H1-206ENST00000531594 MRPL50Q8N5N7 158 aaKnown RBP5.8□□□□□ -1.48
RC3H1-206ENST00000531594 CHGAP10645 457 aaKnown RBP5.79□□□□□ -1.48
RC3H1-206ENST00000531594 GOLGA8CPA6NN73 597 aa5.78□□□□□ -1.48
RC3H1-206ENST00000531594 COL9A1P20849 921 aa5.78□□□□□ -1.48
RC3H1-206ENST00000531594 BCAMP50895 628 aa5.78□□□□□ -1.48
RC3H1-206ENST00000531594 JPH4Q96JJ6 628 aa5.78□□□□□ -1.48
RC3H1-206ENST00000531594 ANO8Q9HCE9 1232 aaPredicted RBP5.78□□□□□ -1.48
RC3H1-206ENST00000531594 LCE2BO14633 110 aa5.77□□□□□ -1.49
RC3H1-206ENST00000531594 EVI5O60447 810 aa5.77□□□□□ -1.49
RC3H1-206ENST00000531594 RGS20O76081 388 aa5.77□□□□□ -1.49
RC3H1-206ENST00000531594 ZDHHC16Q969W1 377 aa5.77□□□□□ -1.49
RC3H1-206ENST00000531594 EMILIN3Q9NT22 766 aa5.75□□□□□ -1.49
RC3H1-206ENST00000531594 ITGBL1O95965 494 aaPredicted RBP5.74□□□□□ -1.49
RC3H1-206ENST00000531594 NBPF3Q9H094 633 aa5.74□□□□□ -1.49
RC3H1-206ENST00000531594 PCDHGA10Q9Y5H3 936 aa5.74□□□□□ -1.49
RC3H1-206ENST00000531594 PPP1R3GB7ZBB8 358 aa5.73□□□□□ -1.49
RC3H1-206ENST00000531594 Q6ZNB5 142 aa5.72□□□□□ -1.49
RC3H1-206ENST00000531594 LARP6Q9BRS8 491 aaKnown RBP5.72□□□□□ -1.49
RC3H1-206ENST00000531594 WBP1LQ9NX94 342 aa5.72□□□□□ -1.49
RC3H1-206ENST00000531594 SEPT9Q9UHD8 586 aaPredicted RBP5.72□□□□□ -1.49
RC3H1-206ENST00000531594 ANKK1Q8NFD2 765 aa5.71□□□□□ -1.5
RC3H1-206ENST00000531594 DNAJC5Q9H3Z4 198 aa5.71□□□□□ -1.5
RC3H1-206ENST00000531594 RABGEF1Q9UJ41 708 aa5.71□□□□□ -1.5
RC3H1-206ENST00000531594 SOWAHBA6NEL2 793 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms