RNA–Protein interactions for RNA: ENST00000531589.5

SF3B2-212, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-212ENST00000531589 FYCO1Q9BQS8 1478 aa21.21■□□□□ 0.99
SF3B2-212ENST00000531589 ZFYVE16Q7Z3T8 1539 aa21.2■□□□□ 0.98
SF3B2-212ENST00000531589 ADAMTSL3P82987 1691 aa21.2■□□□□ 0.98
SF3B2-212ENST00000531589 ARHGAP5Q13017 1502 aa21.19■□□□□ 0.98
SF3B2-212ENST00000531589 LRRIQ1Q96JM4 1722 aa21.19■□□□□ 0.98
SF3B2-212ENST00000531589 PTPRMP28827 1452 aa21.18■□□□□ 0.98
SF3B2-212ENST00000531589 HECW2Q9P2P5 1572 aa21.17■□□□□ 0.98
SF3B2-212ENST00000531589 BCORL1Q5H9F3 1711 aa21.17■□□□□ 0.98
SF3B2-212ENST00000531589 YEATS2Q9ULM3 1422 aa21.16■□□□□ 0.98
SF3B2-212ENST00000531589 ZNF518AQ6AHZ1 1483 aa21.14■□□□□ 0.98
SF3B2-212ENST00000531589 MYT1LQ9UL68 1186 aa21.11■□□□□ 0.97
SF3B2-212ENST00000531589 ATP10AO60312 1499 aa21.11■□□□□ 0.97
SF3B2-212ENST00000531589 MADDQ8WXG6 1647 aa21.11■□□□□ 0.97
SF3B2-212ENST00000531589 AFAP1Q8N556 730 aa21.1■□□□□ 0.97
SF3B2-212ENST00000531589 PREX2Q70Z35 1606 aa21.08■□□□□ 0.97
SF3B2-212ENST00000531589 C9orf84Q5VXU9 1444 aa21.08■□□□□ 0.97
SF3B2-212ENST00000531589 CDC42BPBQ9Y5S2 1711 aa21.07■□□□□ 0.96
SF3B2-212ENST00000531589 MLECQ14165 292 aa21.06■□□□□ 0.96
SF3B2-212ENST00000531589 KDM5CP41229 1560 aa21.06■□□□□ 0.96
SF3B2-212ENST00000531589 CEP162Q5TB80 1403 aa21.04■□□□□ 0.96
SF3B2-212ENST00000531589 MLH3Q9UHC1 1453 aa21.03■□□□□ 0.96
SF3B2-212ENST00000531589 MTUS2Q5JR59 1369 aa21.03■□□□□ 0.96
SF3B2-212ENST00000531589 RIMS1Q86UR5 1692 aaKnown RBP21.02■□□□□ 0.96
SF3B2-212ENST00000531589 ZNF777Q9ULD5 760 aaPredicted RBP21.02■□□□□ 0.96
SF3B2-212ENST00000531589 ABCC1P33527 1531 aa21.02■□□□□ 0.96
SF3B2-212ENST00000531589 GPATCH8Q9UKJ3 1502 aaKnown RBP21■□□□□ 0.95
SF3B2-212ENST00000531589 TRAPPC8Q9Y2L5 1435 aa21■□□□□ 0.95
SF3B2-212ENST00000531589 CDC42BPAQ5VT25 1732 aa21■□□□□ 0.95
SF3B2-212ENST00000531589 CCNB3Q8WWL7 1395 aa20.99■□□□□ 0.95
SF3B2-212ENST00000531589 SIGLEC1Q9BZZ2 1709 aa20.99■□□□□ 0.95
SF3B2-212ENST00000531589 CFDP1Q9UEE9 299 aaPredicted RBP20.99■□□□□ 0.95
SF3B2-212ENST00000531589 ARHGEF12Q9NZN5 1544 aa20.99■□□□□ 0.95
SF3B2-212ENST00000531589 PLPPR3Q6T4P5 718 aa20.97■□□□□ 0.95
SF3B2-212ENST00000531589 ITSN2Q9NZM3 1697 aa20.96■□□□□ 0.95
SF3B2-212ENST00000531589 REREQ9P2R6 1566 aa20.96■□□□□ 0.95
SF3B2-212ENST00000531589 PLEKHH2Q8IVE3 1493 aa20.95■□□□□ 0.94
SF3B2-212ENST00000531589 DIP2CQ9Y2E4 1556 aa20.95■□□□□ 0.94
SF3B2-212ENST00000531589 FER1L4A9Z1Z3 1794 aa20.95■□□□□ 0.94
SF3B2-212ENST00000531589 KIAA1107Q9UPP5 1409 aa20.94■□□□□ 0.94
SF3B2-212ENST00000531589 LMTK3Q96Q04 1460 aa20.93■□□□□ 0.94
SF3B2-212ENST00000531589 EHBP1L1Q8N3D4 1523 aa20.93■□□□□ 0.94
SF3B2-212ENST00000531589 HNRNPMP52272 730 aaKnown RBP eCLIP20.92■□□□□ 0.94
SF3B2-212ENST00000531589 ESF1Q9H501 851 aaKnown RBP20.92■□□□□ 0.94
SF3B2-212ENST00000531589 SPAG9O60271 1321 aaKnown RBP20.92■□□□□ 0.94
SF3B2-212ENST00000531589 SAMD9LQ8IVG5 1584 aa20.92■□□□□ 0.94
SF3B2-212ENST00000531589 ABCA6Q8N139 1617 aa20.91■□□□□ 0.94
SF3B2-212ENST00000531589 AGLP35573 1532 aa20.9■□□□□ 0.94
SF3B2-212ENST00000531589 SYCP2Q9BX26 1530 aa20.9■□□□□ 0.94
SF3B2-212ENST00000531589 LOC105371045A0A1W2PR82 267 aa20.89■□□□□ 0.93
SF3B2-212ENST00000531589 KIDINS220Q9ULH0 1771 aa20.87■□□□□ 0.93
SF3B2-212ENST00000531589 ILDR1Q86SU0 546 aaPredicted RBP20.86■□□□□ 0.93
SF3B2-212ENST00000531589 CEBPAP49715 358 aaPredicted RBP20.85■□□□□ 0.93
SF3B2-212ENST00000531589 HSPA2P54652 639 aa20.84■□□□□ 0.93
SF3B2-212ENST00000531589 VPS8Q8N3P4 1428 aa20.84■□□□□ 0.93
SF3B2-212ENST00000531589 TIAM1Q13009 1591 aa20.84■□□□□ 0.93
SF3B2-212ENST00000531589 ATP7AQ04656 1500 aa20.82■□□□□ 0.92
SF3B2-212ENST00000531589 CNTLNQ9NXG0 1405 aa20.81■□□□□ 0.92
SF3B2-212ENST00000531589 ZNF644Q9H582 1327 aaPredicted RBP20.8■□□□□ 0.92
SF3B2-212ENST00000531589 NCOA2Q15596 1464 aa20.8■□□□□ 0.92
SF3B2-212ENST00000531589 SUPT6HQ7KZ85 1726 aaKnown RBP20.79■□□□□ 0.92
SF3B2-212ENST00000531589 RSPH4AQ5TD94 716 aa20.79■□□□□ 0.92
SF3B2-212ENST00000531589 INO80Q9ULG1 1556 aaPredicted RBP20.78■□□□□ 0.92
SF3B2-212ENST00000531589 PREX1Q8TCU6 1659 aa20.77■□□□□ 0.92
SF3B2-212ENST00000531589 A2MP01023 1474 aa20.77■□□□□ 0.92
SF3B2-212ENST00000531589 UHRF1BP1Q6BDS2 1440 aa20.77■□□□□ 0.91
SF3B2-212ENST00000531589 MBD5Q9P267 1494 aa20.76■□□□□ 0.91
SF3B2-212ENST00000531589 RTEL1-TNFRSF6BF6WH68 1400 aa20.76■□□□□ 0.91
SF3B2-212ENST00000531589 LRRC9Q6ZRR7 1453 aa20.74■□□□□ 0.91
SF3B2-212ENST00000531589 PPP6R1Q9UPN7 881 aa20.73■□□□□ 0.91
SF3B2-212ENST00000531589 SETD1BQ9UPS6 1966 aaKnown RBP20.73■□□□□ 0.91
SF3B2-212ENST00000531589 MAP3K1Q13233 1512 aa20.73■□□□□ 0.91
SF3B2-212ENST00000531589 PLXNC1O60486 1568 aa20.72■□□□□ 0.91
SF3B2-212ENST00000531589 C3P01024 1663 aa20.71■□□□□ 0.91
SF3B2-212ENST00000531589 CCDC141Q6ZP82 1450 aa20.71■□□□□ 0.91
SF3B2-212ENST00000531589 GGT6Q6P531 493 aa20.71■□□□□ 0.91
SF3B2-212ENST00000531589 DMRT2Q9Y5R5 561 aa20.71■□□□□ 0.91
SF3B2-212ENST00000531589 CAMSAP2Q08AD1 1489 aa20.7■□□□□ 0.9
SF3B2-212ENST00000531589 APLP2Q06481 763 aa20.7■□□□□ 0.9
SF3B2-212ENST00000531589 ADGBQ8N7X0 1667 aa20.7■□□□□ 0.9
SF3B2-212ENST00000531589 ZMYM3Q14202 1370 aa20.7■□□□□ 0.9
SF3B2-212ENST00000531589 TSPY4P0CV99 314 aa20.69■□□□□ 0.9
SF3B2-212ENST00000531589 TSPY10P0CW01 314 aa20.69■□□□□ 0.9
SF3B2-212ENST00000531589 FBXO41Q8TF61 875 aa20.69■□□□□ 0.9
SF3B2-212ENST00000531589 DHX29Q7Z478 1369 aaKnown RBP20.68■□□□□ 0.9
SF3B2-212ENST00000531589 NPATQ14207 1427 aa20.68■□□□□ 0.9
SF3B2-212ENST00000531589 MROH2AA6NES4 1674 aa20.67■□□□□ 0.9
SF3B2-212ENST00000531589 KANK4Q5T7N3 995 aaPredicted RBP20.66■□□□□ 0.9
SF3B2-212ENST00000531589 ARHGEF5Q12774 1597 aa20.63■□□□□ 0.89
SF3B2-212ENST00000531589 MIA2Q96PC5 1412 aa20.62■□□□□ 0.89
SF3B2-212ENST00000531589 KIF3BO15066 747 aa20.61■□□□□ 0.89
SF3B2-212ENST00000531589 CLTCQ00610 1675 aaKnown RBP20.61■□□□□ 0.89
SF3B2-212ENST00000531589 MYOM3Q5VTT5 1437 aa20.6■□□□□ 0.89
SF3B2-212ENST00000531589 CERKQ8TCT0 537 aa20.57■□□□□ 0.88
SF3B2-212ENST00000531589 PTPRKQ15262 1439 aa20.56■□□□□ 0.88
SF3B2-212ENST00000531589 PTPRTO14522 1441 aa20.55■□□□□ 0.88
SF3B2-212ENST00000531589 FAM135AQ9P2D6 1515 aa20.55■□□□□ 0.88
SF3B2-212ENST00000531589 WASHC2CQ9Y4E1 1318 aa20.54■□□□□ 0.88
SF3B2-212ENST00000531589 STRCQ7RTU9 1775 aa20.54■□□□□ 0.88
SF3B2-212ENST00000531589 MAST1Q9Y2H9 1570 aa20.52■□□□□ 0.88
SF3B2-212ENST00000531589 NCOA1Q15788 1441 aa20.52■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms