RNA–Protein interactions for RNA: ENST00000531525.2

ATM-216, Transcript of ATM serine/threonine kinase, humanhuman

TSL 1 (best)

Gene ATM, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-216ENST00000531525 ERICH6Q7L0X2 663 aa11.62□□□□□ -0.55
ATM-216ENST00000531525 CFAP44Q96MT7 982 aa11.62□□□□□ -0.55
ATM-216ENST00000531525 PPP1R37O75864 691 aa11.6□□□□□ -0.55
ATM-216ENST00000531525 L3MBTL3Q96JM7 780 aaPredicted RBP11.6□□□□□ -0.55
ATM-216ENST00000531525 BOLA1Q9Y3E2 137 aa11.59□□□□□ -0.55
ATM-216ENST00000531525 RYDENQ9NUL5 291 aaKnown RBP11.58□□□□□ -0.56
ATM-216ENST00000531525 OTUD5Q96G74 571 aa11.57□□□□□ -0.56
ATM-216ENST00000531525 TMEM121BQ9BXQ6 578 aaPredicted RBP11.57□□□□□ -0.56
ATM-216ENST00000531525 MICALL2Q8IY33 904 aa11.55□□□□□ -0.56
ATM-216ENST00000531525 MAMSTRQ6ZN01 415 aa11.54□□□□□ -0.56
ATM-216ENST00000531525 SCUBE2Q9NQ36 999 aa11.52□□□□□ -0.57
ATM-216ENST00000531525 G3V3G9 751 aa11.51□□□□□ -0.57
ATM-216ENST00000531525 RB1CC1Q8TDY2 1594 aa11.51□□□□□ -0.57
ATM-216ENST00000531525 SPRYD3Q8NCJ5 442 aa11.5□□□□□ -0.57
ATM-216ENST00000531525 TMEM132AQ24JP5 1023 aa11.5□□□□□ -0.57
ATM-216ENST00000531525 NBR1Q14596 966 aa11.49□□□□□ -0.57
ATM-216ENST00000531525 C3orf67Q6ZVT6 689 aa11.49□□□□□ -0.57
ATM-216ENST00000531525 C14orf37Q86TY3 774 aa11.48□□□□□ -0.57
ATM-216ENST00000531525 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.48□□□□□ -0.57
ATM-216ENST00000531525 TSHZ2Q9NRE2 1034 aa11.46□□□□□ -0.57
ATM-216ENST00000531525 TMEM92Q6UXU6 159 aa11.45□□□□□ -0.58
ATM-216ENST00000531525 SLAIN1Q8ND83 568 aa11.43□□□□□ -0.58
ATM-216ENST00000531525 RANGAP1P46060 587 aaPredicted RBP11.4□□□□□ -0.58
ATM-216ENST00000531525 KIF3CO14782 793 aa11.37□□□□□ -0.59
ATM-216ENST00000531525 NACADO15069 1562 aa11.37□□□□□ -0.59
ATM-216ENST00000531525 CADPS2Q86UW7 1296 aa11.36□□□□□ -0.59
ATM-216ENST00000531525 C2orf72A6NCS6 295 aa11.35□□□□□ -0.59
ATM-216ENST00000531525 NCKAP5LQ9HCH0 1330 aa11.33□□□□□ -0.6
ATM-216ENST00000531525 UNC13AQ9UPW8 1703 aa11.33□□□□□ -0.6
ATM-216ENST00000531525 CRISPLD2Q9H0B8 497 aa11.32□□□□□ -0.6
ATM-216ENST00000531525 GPHNQ9NQX3 736 aaPredicted RBP11.31□□□□□ -0.6
ATM-216ENST00000531525 TMC2Q8TDI7 906 aa11.3□□□□□ -0.6
ATM-216ENST00000531525 PODXL2Q9NZ53 605 aa11.3□□□□□ -0.6
ATM-216ENST00000531525 PDE4AP27815 886 aa11.26□□□□□ -0.61
ATM-216ENST00000531525 FOXK1P85037 733 aa11.26□□□□□ -0.61
ATM-216ENST00000531525 HOXB3P14651 431 aaPredicted RBP11.25□□□□□ -0.61
ATM-216ENST00000531525 DSG2Q14126 1118 aa11.25□□□□□ -0.61
ATM-216ENST00000531525 LARP6Q9BRS8 491 aaKnown RBP11.23□□□□□ -0.61
ATM-216ENST00000531525 MFSD10Q14728 455 aa11.22□□□□□ -0.61
ATM-216ENST00000531525 SNPHO15079 494 aa11.21□□□□□ -0.61
ATM-216ENST00000531525 SUPT5HO00267 1087 aaKnown RBP11.2□□□□□ -0.62
ATM-216ENST00000531525 PLPP6Q8IY26 295 aa11.2□□□□□ -0.62
ATM-216ENST00000531525 DDX27Q96GQ7 796 aaKnown RBP11.2□□□□□ -0.62
ATM-216ENST00000531525 PPP1R15BQ5SWA1 713 aa11.19□□□□□ -0.62
ATM-216ENST00000531525 LCE2DQ5TA82 110 aaPredicted RBP11.19□□□□□ -0.62
ATM-216ENST00000531525 BICRAQ9NZM4 1560 aa11.19□□□□□ -0.62
ATM-216ENST00000531525 DOK7Q18PE1 504 aa11.17□□□□□ -0.62
ATM-216ENST00000531525 FAM163AQ96GL9 167 aaPredicted RBP11.17□□□□□ -0.62
ATM-216ENST00000531525 ST18O60284 1047 aa11.16□□□□□ -0.62
ATM-216ENST00000531525 MYO15BQ96JP2 1530 aa11.15□□□□□ -0.62
ATM-216ENST00000531525 SLC34A2O95436 690 aa11.14□□□□□ -0.63
ATM-216ENST00000531525 ZNF710Q8N1W2 664 aa11.11□□□□□ -0.63
ATM-216ENST00000531525 RIMBP2O15034 1052 aa11.1□□□□□ -0.63
ATM-216ENST00000531525 GPR153Q6NV75 609 aa11.1□□□□□ -0.63
ATM-216ENST00000531525 ZSWIM6Q9HCJ5 1215 aa11.1□□□□□ -0.63
ATM-216ENST00000531525 CAMK2BQ13554 666 aa11.09□□□□□ -0.63
ATM-216ENST00000531525 PTCD2Q8WV60 388 aaKnown RBP11.09□□□□□ -0.63
ATM-216ENST00000531525 HOXB1P14653 301 aaPredicted RBP11.08□□□□□ -0.64
ATM-216ENST00000531525 EMILIN3Q9NT22 766 aa11.08□□□□□ -0.64
ATM-216ENST00000531525 WDR70Q9NW82 654 aa11.08□□□□□ -0.64
ATM-216ENST00000531525 ARSIQ5FYB1 569 aa11.07□□□□□ -0.64
ATM-216ENST00000531525 OXER1Q8TDS5 423 aa11.07□□□□□ -0.64
ATM-216ENST00000531525 PCDHGA4Q9Y5G9 962 aa11.07□□□□□ -0.64
ATM-216ENST00000531525 KHSRPQ92945 711 aaKnown RBP eCLIP11.06□□□□□ -0.64
ATM-216ENST00000531525 UPF1Q92900 1129 aaKnown RBP eCLIP11.04□□□□□ -0.64
ATM-216ENST00000531525 SHROOM4Q9ULL8 1493 aa11.04□□□□□ -0.64
ATM-216ENST00000531525 E2F4Q16254 413 aa11.03□□□□□ -0.64
ATM-216ENST00000531525 MARVELD3Q96A59 401 aa11.03□□□□□ -0.64
ATM-216ENST00000531525 KDM4FA0A1W2PPD8 638 aa11.01□□□□□ -0.65
ATM-216ENST00000531525 NUDT7P0C024 238 aa11□□□□□ -0.65
ATM-216ENST00000531525 CC2D2AQ9P2K1 1620 aa11□□□□□ -0.65
ATM-216ENST00000531525 TBC1D12O60347 775 aa10.99□□□□□ -0.65
ATM-216ENST00000531525 NPM2Q86SE8 214 aaKnown RBP10.99□□□□□ -0.65
ATM-216ENST00000531525 EMP3P54852 163 aa10.98□□□□□ -0.65
ATM-216ENST00000531525 CECR2Q9BXF3 1484 aa10.96□□□□□ -0.65
ATM-216ENST00000531525 POTEMA6NI47 508 aa10.96□□□□□ -0.65
ATM-216ENST00000531525 DPYSL4O14531 572 aa10.96□□□□□ -0.65
ATM-216ENST00000531525 MAP3K9P80192 1104 aa10.96□□□□□ -0.65
ATM-216ENST00000531525 POTEGQ6S5H5 508 aa10.96□□□□□ -0.65
ATM-216ENST00000531525 KCNV2Q8TDN2 545 aa10.96□□□□□ -0.65
ATM-216ENST00000531525 ARIH1Q9Y4X5 557 aaPredicted RBP10.95□□□□□ -0.66
ATM-216ENST00000531525 EVI5O60447 810 aa10.94□□□□□ -0.66
ATM-216ENST00000531525 UBTFP17480 764 aaKnown RBP10.94□□□□□ -0.66
ATM-216ENST00000531525 TRIM26Q12899 539 aaPredicted RBP10.94□□□□□ -0.66
ATM-216ENST00000531525 POTEB3A0JP26 581 aa10.93□□□□□ -0.66
ATM-216ENST00000531525 FAM205CA6NFA0 338 aa10.93□□□□□ -0.66
ATM-216ENST00000531525 POTEBQ6S5H4 581 aa10.93□□□□□ -0.66
ATM-216ENST00000531525 LHX6Q9UPM6 363 aa10.93□□□□□ -0.66
ATM-216ENST00000531525 ZCCHC6Q5VYS8 1495 aaKnown RBP10.93□□□□□ -0.66
ATM-216ENST00000531525 DCAF1Q9Y4B6 1507 aa10.93□□□□□ -0.66
ATM-216ENST00000531525 EIF4G1Q04637 1599 aaKnown RBP10.92□□□□□ -0.66
ATM-216ENST00000531525 ZNF316A6NFI3 1004 aaPredicted RBP10.92□□□□□ -0.66
ATM-216ENST00000531525 ANO8Q9HCE9 1232 aaPredicted RBP10.92□□□□□ -0.66
ATM-216ENST00000531525 HS3ST6Q96QI5 342 aa10.91□□□□□ -0.66
ATM-216ENST00000531525 ERBB3P21860 1342 aa10.91□□□□□ -0.66
ATM-216ENST00000531525 SCRIBQ14160 1630 aa10.9□□□□□ -0.66
ATM-216ENST00000531525 P3H3Q8IVL6 736 aa10.89□□□□□ -0.67
ATM-216ENST00000531525 ARHGEF1Q92888 912 aaKnown RBP10.89□□□□□ -0.67
ATM-216ENST00000531525 PDIA6Q15084 440 aa10.89□□□□□ -0.67
ATM-216ENST00000531525 VARS2Q5ST30 1063 aaKnown RBP10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms