RNA–Protein interactions for RNA: ENST00000531406.1

TM9SF1-211, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 2

Gene TM9SF1, Length 1,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-211ENST00000531406 TROQ12816 1431 aaPredicted RBP21■□□□□ 0.95
TM9SF1-211ENST00000531406 MADDQ8WXG6 1647 aa21■□□□□ 0.95
TM9SF1-211ENST00000531406 CLIP1P30622 1438 aa20.96■□□□□ 0.95
TM9SF1-211ENST00000531406 KIF14Q15058 1648 aa20.95■□□□□ 0.94
TM9SF1-211ENST00000531406 MLECQ14165 292 aa20.93■□□□□ 0.94
TM9SF1-211ENST00000531406 CASKIN1Q8WXD9 1431 aa20.93■□□□□ 0.94
TM9SF1-211ENST00000531406 ATP10AO60312 1499 aa20.92■□□□□ 0.94
TM9SF1-211ENST00000531406 MYO5CQ9NQX4 1742 aa20.9■□□□□ 0.94
TM9SF1-211ENST00000531406 ARHGAP5Q13017 1502 aa20.9■□□□□ 0.94
TM9SF1-211ENST00000531406 AFAP1Q8N556 730 aa20.9■□□□□ 0.94
TM9SF1-211ENST00000531406 SIGLEC1Q9BZZ2 1709 aa20.9■□□□□ 0.94
TM9SF1-211ENST00000531406 RIMS1Q86UR5 1692 aaKnown RBP20.89■□□□□ 0.94
TM9SF1-211ENST00000531406 PCF11O94913 1555 aaKnown RBP20.89■□□□□ 0.94
TM9SF1-211ENST00000531406 LMTK3Q96Q04 1460 aa20.89■□□□□ 0.94
TM9SF1-211ENST00000531406 PLPPR3Q6T4P5 718 aa20.89■□□□□ 0.93
TM9SF1-211ENST00000531406 CCDC18Q5T9S5 1454 aa20.88■□□□□ 0.93
TM9SF1-211ENST00000531406 ZNF518AQ6AHZ1 1483 aa20.88■□□□□ 0.93
TM9SF1-211ENST00000531406 LRRIQ1Q96JM4 1722 aa20.87■□□□□ 0.93
TM9SF1-211ENST00000531406 C9orf84Q5VXU9 1444 aa20.87■□□□□ 0.93
TM9SF1-211ENST00000531406 MYT1LQ9UL68 1186 aa20.83■□□□□ 0.93
TM9SF1-211ENST00000531406 KDM5CP41229 1560 aa20.82■□□□□ 0.92
TM9SF1-211ENST00000531406 HSPA2P54652 639 aa20.82■□□□□ 0.92
TM9SF1-211ENST00000531406 ARHGEF12Q9NZN5 1544 aa20.82■□□□□ 0.92
TM9SF1-211ENST00000531406 FYCO1Q9BQS8 1478 aa20.81■□□□□ 0.92
TM9SF1-211ENST00000531406 TRAPPC8Q9Y2L5 1435 aa20.78■□□□□ 0.92
TM9SF1-211ENST00000531406 MLH3Q9UHC1 1453 aa20.78■□□□□ 0.92
TM9SF1-211ENST00000531406 FBXO41Q8TF61 875 aa20.78■□□□□ 0.92
TM9SF1-211ENST00000531406 CDC42BPBQ9Y5S2 1711 aa20.76■□□□□ 0.91
TM9SF1-211ENST00000531406 PREX2Q70Z35 1606 aa20.76■□□□□ 0.91
TM9SF1-211ENST00000531406 CEBPAP49715 358 aaPredicted RBP20.76■□□□□ 0.91
TM9SF1-211ENST00000531406 FER1L4A9Z1Z3 1794 aa20.75■□□□□ 0.91
TM9SF1-211ENST00000531406 ABCC1P33527 1531 aa20.75■□□□□ 0.91
TM9SF1-211ENST00000531406 DIP2CQ9Y2E4 1556 aa20.75■□□□□ 0.91
TM9SF1-211ENST00000531406 REREQ9P2R6 1566 aa20.72■□□□□ 0.91
TM9SF1-211ENST00000531406 ZNF777Q9ULD5 760 aaPredicted RBP20.72■□□□□ 0.91
TM9SF1-211ENST00000531406 GPATCH8Q9UKJ3 1502 aaKnown RBP20.7■□□□□ 0.9
TM9SF1-211ENST00000531406 ABCA6Q8N139 1617 aa20.7■□□□□ 0.9
TM9SF1-211ENST00000531406 AGLP35573 1532 aa20.68■□□□□ 0.9
TM9SF1-211ENST00000531406 ITSN2Q9NZM3 1697 aa20.67■□□□□ 0.9
TM9SF1-211ENST00000531406 HNRNPMP52272 730 aaKnown RBP eCLIP20.67■□□□□ 0.9
TM9SF1-211ENST00000531406 CDC42BPAQ5VT25 1732 aa20.67■□□□□ 0.9
TM9SF1-211ENST00000531406 CFDP1Q9UEE9 299 aaPredicted RBP20.66■□□□□ 0.9
TM9SF1-211ENST00000531406 MTUS2Q5JR59 1369 aa20.65■□□□□ 0.9
TM9SF1-211ENST00000531406 SPAG9O60271 1321 aaKnown RBP20.65■□□□□ 0.9
TM9SF1-211ENST00000531406 ESF1Q9H501 851 aaKnown RBP20.65■□□□□ 0.9
TM9SF1-211ENST00000531406 SAMD9LQ8IVG5 1584 aa20.64■□□□□ 0.9
TM9SF1-211ENST00000531406 CCNB3Q8WWL7 1395 aa20.64■□□□□ 0.89
TM9SF1-211ENST00000531406 SYCP2Q9BX26 1530 aa20.63■□□□□ 0.89
TM9SF1-211ENST00000531406 KIAA1107Q9UPP5 1409 aa20.62■□□□□ 0.89
TM9SF1-211ENST00000531406 KIDINS220Q9ULH0 1771 aa20.62■□□□□ 0.89
TM9SF1-211ENST00000531406 UHRF1BP1Q6BDS2 1440 aa20.61■□□□□ 0.89
TM9SF1-211ENST00000531406 PLEKHH2Q8IVE3 1493 aa20.61■□□□□ 0.89
TM9SF1-211ENST00000531406 PREX1Q8TCU6 1659 aa20.61■□□□□ 0.89
TM9SF1-211ENST00000531406 CERKQ8TCT0 537 aa20.58■□□□□ 0.89
TM9SF1-211ENST00000531406 CEP162Q5TB80 1403 aa20.58■□□□□ 0.88
TM9SF1-211ENST00000531406 CNTLNQ9NXG0 1405 aa20.58■□□□□ 0.88
TM9SF1-211ENST00000531406 DMRT2Q9Y5R5 561 aa20.57■□□□□ 0.88
TM9SF1-211ENST00000531406 ZNF644Q9H582 1327 aaPredicted RBP20.55■□□□□ 0.88
TM9SF1-211ENST00000531406 C3P01024 1663 aa20.54■□□□□ 0.88
TM9SF1-211ENST00000531406 ATP7AQ04656 1500 aa20.53■□□□□ 0.88
TM9SF1-211ENST00000531406 A2MP01023 1474 aa20.52■□□□□ 0.88
TM9SF1-211ENST00000531406 EHBP1L1Q8N3D4 1523 aa20.52■□□□□ 0.87
TM9SF1-211ENST00000531406 ZMYM3Q14202 1370 aa20.51■□□□□ 0.87
TM9SF1-211ENST00000531406 TIAM1Q13009 1591 aa20.51■□□□□ 0.87
TM9SF1-211ENST00000531406 INO80Q9ULG1 1556 aaPredicted RBP20.5■□□□□ 0.87
TM9SF1-211ENST00000531406 MBD5Q9P267 1494 aa20.5■□□□□ 0.87
TM9SF1-211ENST00000531406 PLXNC1O60486 1568 aa20.48■□□□□ 0.87
TM9SF1-211ENST00000531406 NPATQ14207 1427 aa20.48■□□□□ 0.87
TM9SF1-211ENST00000531406 STRCQ7RTU9 1775 aa20.47■□□□□ 0.87
TM9SF1-211ENST00000531406 SETD1BQ9UPS6 1966 aaKnown RBP20.47■□□□□ 0.87
TM9SF1-211ENST00000531406 GGT6Q6P531 493 aa20.47■□□□□ 0.87
TM9SF1-211ENST00000531406 PTPRTO14522 1441 aa20.46■□□□□ 0.87
TM9SF1-211ENST00000531406 SUPT6HQ7KZ85 1726 aaKnown RBP20.45■□□□□ 0.86
TM9SF1-211ENST00000531406 RTEL1-TNFRSF6BF6WH68 1400 aa20.44■□□□□ 0.86
TM9SF1-211ENST00000531406 PPP6R1Q9UPN7 881 aa20.44■□□□□ 0.86
TM9SF1-211ENST00000531406 NCOA2Q15596 1464 aa20.43■□□□□ 0.86
TM9SF1-211ENST00000531406 MROH2AA6NES4 1674 aa20.43■□□□□ 0.86
TM9SF1-211ENST00000531406 LOC105371045A0A1W2PR82 267 aa20.43■□□□□ 0.86
TM9SF1-211ENST00000531406 NCOA1Q15788 1441 aa20.42■□□□□ 0.86
TM9SF1-211ENST00000531406 DHX29Q7Z478 1369 aaKnown RBP20.41■□□□□ 0.86
TM9SF1-211ENST00000531406 PTPRKQ15262 1439 aa20.39■□□□□ 0.85
TM9SF1-211ENST00000531406 RSPH4AQ5TD94 716 aa20.39■□□□□ 0.85
TM9SF1-211ENST00000531406 CLTCQ00610 1675 aaKnown RBP20.38■□□□□ 0.85
TM9SF1-211ENST00000531406 ADGBQ8N7X0 1667 aa20.38■□□□□ 0.85
TM9SF1-211ENST00000531406 CAMSAP2Q08AD1 1489 aa20.37■□□□□ 0.85
TM9SF1-211ENST00000531406 CCDC141Q6ZP82 1450 aa20.37■□□□□ 0.85
TM9SF1-211ENST00000531406 VPS8Q8N3P4 1428 aa20.36■□□□□ 0.85
TM9SF1-211ENST00000531406 CAMSAP1Q5T5Y3 1602 aa20.35■□□□□ 0.85
TM9SF1-211ENST00000531406 NCKAP5LQ9HCH0 1330 aa20.35■□□□□ 0.85
TM9SF1-211ENST00000531406 KIF3BO15066 747 aa20.35■□□□□ 0.85
TM9SF1-211ENST00000531406 LRRC9Q6ZRR7 1453 aa20.33■□□□□ 0.85
TM9SF1-211ENST00000531406 TSPY4P0CV99 314 aa20.32■□□□□ 0.84
TM9SF1-211ENST00000531406 TSPY10P0CW01 314 aa20.32■□□□□ 0.84
TM9SF1-211ENST00000531406 PKD2Q13563 968 aa20.31■□□□□ 0.84
TM9SF1-211ENST00000531406 LTBP4Q8N2S1 1624 aa20.31■□□□□ 0.84
TM9SF1-211ENST00000531406 MYO3AQ8NEV4 1616 aa20.29■□□□□ 0.84
TM9SF1-211ENST00000531406 KANK4Q5T7N3 995 aaPredicted RBP20.29■□□□□ 0.84
TM9SF1-211ENST00000531406 PLA2R1Q13018 1463 aa20.29■□□□□ 0.84
TM9SF1-211ENST00000531406 CEP170BQ9Y4F5 1589 aaPredicted RBP20.29■□□□□ 0.84
TM9SF1-211ENST00000531406 FBXO31Q5XUX0 539 aaPredicted RBP20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms