RNA–Protein interactions for RNA: ENST00000531290.5

TRAPPC4-210, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,135 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-210ENST00000531290 CCDC18Q5T9S5 1454 aa36.05■■■■□ 3.36
TRAPPC4-210ENST00000531290 ADAMTSL3P82987 1691 aa36.04■■■■□ 3.36
TRAPPC4-210ENST00000531290 ZFYVE16Q7Z3T8 1539 aa36.03■■■■□ 3.36
TRAPPC4-210ENST00000531290 ARHGAP5Q13017 1502 aa36■■■■□ 3.35
TRAPPC4-210ENST00000531290 PCF11O94913 1555 aaKnown RBP35.99■■■■□ 3.35
TRAPPC4-210ENST00000531290 BCORL1Q5H9F3 1711 aa35.98■■■■□ 3.35
TRAPPC4-210ENST00000531290 MYO5CQ9NQX4 1742 aa35.97■■■■□ 3.35
TRAPPC4-210ENST00000531290 AFAP1Q8N556 730 aa35.96■■■■□ 3.35
TRAPPC4-210ENST00000531290 MYT1LQ9UL68 1186 aa35.96■■■■□ 3.35
TRAPPC4-210ENST00000531290 FYCO1Q9BQS8 1478 aa35.96■■■■□ 3.35
TRAPPC4-210ENST00000531290 MLECQ14165 292 aa35.95■■■■□ 3.35
TRAPPC4-210ENST00000531290 ATP10AO60312 1499 aa35.91■■■■□ 3.34
TRAPPC4-210ENST00000531290 ZNF518AQ6AHZ1 1483 aa35.91■■■■□ 3.34
TRAPPC4-210ENST00000531290 LRRIQ1Q96JM4 1722 aa35.91■■■■□ 3.34
TRAPPC4-210ENST00000531290 MADDQ8WXG6 1647 aa35.9■■■■□ 3.34
TRAPPC4-210ENST00000531290 PLPPR3Q6T4P5 718 aa35.87■■■■□ 3.33
TRAPPC4-210ENST00000531290 C9orf84Q5VXU9 1444 aa35.84■■■■□ 3.33
TRAPPC4-210ENST00000531290 ZNF777Q9ULD5 760 aaPredicted RBP35.8■■■■□ 3.32
TRAPPC4-210ENST00000531290 RIMS1Q86UR5 1692 aaKnown RBP35.75■■■■□ 3.31
TRAPPC4-210ENST00000531290 ILDR1Q86SU0 546 aaPredicted RBP35.75■■■■□ 3.31
TRAPPC4-210ENST00000531290 TRAPPC8Q9Y2L5 1435 aa35.74■■■■□ 3.31
TRAPPC4-210ENST00000531290 KDM5CP41229 1560 aa35.74■■■■□ 3.31
TRAPPC4-210ENST00000531290 PREX2Q70Z35 1606 aa35.73■■■■□ 3.31
TRAPPC4-210ENST00000531290 SIGLEC1Q9BZZ2 1709 aa35.72■■■■□ 3.31
TRAPPC4-210ENST00000531290 CDC42BPBQ9Y5S2 1711 aa35.72■■■■□ 3.31
TRAPPC4-210ENST00000531290 MTUS2Q5JR59 1369 aa35.72■■■■□ 3.31
TRAPPC4-210ENST00000531290 MLH3Q9UHC1 1453 aa35.72■■■■□ 3.31
TRAPPC4-210ENST00000531290 ARHGEF12Q9NZN5 1544 aa35.71■■■■□ 3.31
TRAPPC4-210ENST00000531290 ABCC1P33527 1531 aa35.69■■■■□ 3.3
TRAPPC4-210ENST00000531290 CEP162Q5TB80 1403 aa35.69■■■■□ 3.3
TRAPPC4-210ENST00000531290 CFDP1Q9UEE9 299 aaPredicted RBP35.69■■■■□ 3.3
TRAPPC4-210ENST00000531290 GPATCH8Q9UKJ3 1502 aaKnown RBP35.68■■■■□ 3.3
TRAPPC4-210ENST00000531290 LMTK3Q96Q04 1460 aa35.67■■■■□ 3.3
TRAPPC4-210ENST00000531290 CCNB3Q8WWL7 1395 aa35.66■■■■□ 3.3
TRAPPC4-210ENST00000531290 HNRNPMP52272 730 aaKnown RBP eCLIP35.64■■■■□ 3.3
TRAPPC4-210ENST00000531290 HSPA2P54652 639 aa35.61■■■■□ 3.29
TRAPPC4-210ENST00000531290 DIP2CQ9Y2E4 1556 aa35.6■■■■□ 3.29
TRAPPC4-210ENST00000531290 CEBPAP49715 358 aaPredicted RBP35.6■■■■□ 3.29
TRAPPC4-210ENST00000531290 ESF1Q9H501 851 aaKnown RBP35.59■■■■□ 3.29
TRAPPC4-210ENST00000531290 SPAG9O60271 1321 aaKnown RBP35.58■■■■□ 3.29
TRAPPC4-210ENST00000531290 CDC42BPAQ5VT25 1732 aa35.58■■■■□ 3.29
TRAPPC4-210ENST00000531290 LOC105371045A0A1W2PR82 267 aa35.55■■■■□ 3.28
TRAPPC4-210ENST00000531290 FER1L4A9Z1Z3 1794 aa35.55■■■■□ 3.28
TRAPPC4-210ENST00000531290 KIAA1107Q9UPP5 1409 aa35.55■■■■□ 3.28
TRAPPC4-210ENST00000531290 REREQ9P2R6 1566 aa35.55■■■■□ 3.28
TRAPPC4-210ENST00000531290 ITSN2Q9NZM3 1697 aa35.54■■■■□ 3.28
TRAPPC4-210ENST00000531290 PLEKHH2Q8IVE3 1493 aa35.54■■■■□ 3.28
TRAPPC4-210ENST00000531290 SAMD9LQ8IVG5 1584 aa35.52■■■■□ 3.28
TRAPPC4-210ENST00000531290 ABCA6Q8N139 1617 aa35.52■■■■□ 3.28
TRAPPC4-210ENST00000531290 SYCP2Q9BX26 1530 aa35.51■■■■□ 3.27
TRAPPC4-210ENST00000531290 AGLP35573 1532 aa35.49■■■■□ 3.27
TRAPPC4-210ENST00000531290 EHBP1L1Q8N3D4 1523 aa35.45■■■■□ 3.27
TRAPPC4-210ENST00000531290 ZNF644Q9H582 1327 aaPredicted RBP35.44■■■■□ 3.26
TRAPPC4-210ENST00000531290 KIDINS220Q9ULH0 1771 aa35.43■■■■□ 3.26
TRAPPC4-210ENST00000531290 CNTLNQ9NXG0 1405 aa35.35■■■■□ 3.25
TRAPPC4-210ENST00000531290 TIAM1Q13009 1591 aa35.34■■■■□ 3.25
TRAPPC4-210ENST00000531290 UHRF1BP1Q6BDS2 1440 aa35.34■■■■□ 3.25
TRAPPC4-210ENST00000531290 ATP7AQ04656 1500 aa35.34■■■■□ 3.25
TRAPPC4-210ENST00000531290 FBXO41Q8TF61 875 aa35.34■■■■□ 3.25
TRAPPC4-210ENST00000531290 VPS8Q8N3P4 1428 aa35.32■■■■□ 3.24
TRAPPC4-210ENST00000531290 A2MP01023 1474 aa35.3■■■■□ 3.24
TRAPPC4-210ENST00000531290 NCOA2Q15596 1464 aa35.29■■■■□ 3.24
TRAPPC4-210ENST00000531290 MBD5Q9P267 1494 aa35.29■■■■□ 3.24
TRAPPC4-210ENST00000531290 GGT6Q6P531 493 aa35.28■■■■□ 3.24
TRAPPC4-210ENST00000531290 RSPH4AQ5TD94 716 aa35.26■■■■□ 3.24
TRAPPC4-210ENST00000531290 PREX1Q8TCU6 1659 aa35.25■■■■□ 3.23
TRAPPC4-210ENST00000531290 DMRT2Q9Y5R5 561 aa35.25■■■■□ 3.23
TRAPPC4-210ENST00000531290 INO80Q9ULG1 1556 aaPredicted RBP35.24■■■■□ 3.23
TRAPPC4-210ENST00000531290 ZMYM3Q14202 1370 aa35.24■■■■□ 3.23
TRAPPC4-210ENST00000531290 RTEL1-TNFRSF6BF6WH68 1400 aa35.23■■■■□ 3.23
TRAPPC4-210ENST00000531290 PPP6R1Q9UPN7 881 aa35.2■■■■□ 3.23
TRAPPC4-210ENST00000531290 SUPT6HQ7KZ85 1726 aaKnown RBP35.18■■■■□ 3.22
TRAPPC4-210ENST00000531290 C3P01024 1663 aa35.18■■■■□ 3.22
TRAPPC4-210ENST00000531290 LRRC9Q6ZRR7 1453 aa35.17■■■■□ 3.22
TRAPPC4-210ENST00000531290 PLXNC1O60486 1568 aa35.17■■■■□ 3.22
TRAPPC4-210ENST00000531290 DHX29Q7Z478 1369 aaKnown RBP35.15■■■■□ 3.22
TRAPPC4-210ENST00000531290 SETD1BQ9UPS6 1966 aaKnown RBP35.15■■■■□ 3.22
TRAPPC4-210ENST00000531290 TSPY4P0CV99 314 aa35.15■■■■□ 3.22
TRAPPC4-210ENST00000531290 TSPY10P0CW01 314 aa35.15■■■■□ 3.22
TRAPPC4-210ENST00000531290 CAMSAP2Q08AD1 1489 aa35.15■■■■□ 3.22
TRAPPC4-210ENST00000531290 KANK4Q5T7N3 995 aaPredicted RBP35.14■■■■□ 3.22
TRAPPC4-210ENST00000531290 CCDC141Q6ZP82 1450 aa35.14■■■■□ 3.22
TRAPPC4-210ENST00000531290 NPATQ14207 1427 aa35.14■■■■□ 3.22
TRAPPC4-210ENST00000531290 CERKQ8TCT0 537 aa35.12■■■■□ 3.21
TRAPPC4-210ENST00000531290 KIF3BO15066 747 aa35.09■■■■□ 3.21
TRAPPC4-210ENST00000531290 APLP2Q06481 763 aa35.08■■■■□ 3.21
TRAPPC4-210ENST00000531290 MAP3K1Q13233 1512 aa35.06■■■■□ 3.2
TRAPPC4-210ENST00000531290 ADGBQ8N7X0 1667 aa35.05■■■■□ 3.2
TRAPPC4-210ENST00000531290 MROH2AA6NES4 1674 aa35.04■■■■□ 3.2
TRAPPC4-210ENST00000531290 PTPRKQ15262 1439 aa34.99■■■■□ 3.19
TRAPPC4-210ENST00000531290 PTPRTO14522 1441 aa34.98■■■■□ 3.19
TRAPPC4-210ENST00000531290 CLTCQ00610 1675 aaKnown RBP34.98■■■■□ 3.19
TRAPPC4-210ENST00000531290 ARHGEF5Q12774 1597 aa34.96■■■■□ 3.19
TRAPPC4-210ENST00000531290 WASHC2CQ9Y4E1 1318 aa34.96■■■■□ 3.19
TRAPPC4-210ENST00000531290 STRCQ7RTU9 1775 aa34.95■■■■□ 3.19
TRAPPC4-210ENST00000531290 NCOA1Q15788 1441 aa34.95■■■■□ 3.19
TRAPPC4-210ENST00000531290 MIA2Q96PC5 1412 aa34.95■■■■□ 3.19
TRAPPC4-210ENST00000531290 MYOM3Q5VTT5 1437 aa34.94■■■■□ 3.18
TRAPPC4-210ENST00000531290 NCKAP5LQ9HCH0 1330 aa34.88■■■■□ 3.17
TRAPPC4-210ENST00000531290 CAMSAP1Q5T5Y3 1602 aa34.87■■■■□ 3.17
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms