RNA–Protein interactions for RNA: ENST00000531068.5

CAPN1-221, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-221ENST00000531068 POGZQ7Z3K3 1410 aa17.44■□□□□ 0.38
CAPN1-221ENST00000531068 ARHGAP5Q13017 1502 aa17.43■□□□□ 0.38
CAPN1-221ENST00000531068 CFDP1Q9UEE9 299 aaPredicted RBP17.41■□□□□ 0.38
CAPN1-221ENST00000531068 ZNF777Q9ULD5 760 aaPredicted RBP17.41■□□□□ 0.38
CAPN1-221ENST00000531068 FRMPD1Q5SYB0 1578 aa17.4■□□□□ 0.38
CAPN1-221ENST00000531068 CCNB3Q8WWL7 1395 aa17.4■□□□□ 0.38
CAPN1-221ENST00000531068 ZNF518AQ6AHZ1 1483 aa17.39■□□□□ 0.37
CAPN1-221ENST00000531068 YEATS2Q9ULM3 1422 aa17.38■□□□□ 0.37
CAPN1-221ENST00000531068 ZMYM4Q5VZL5 1548 aa17.37■□□□□ 0.37
CAPN1-221ENST00000531068 ZFYVE16Q7Z3T8 1539 aa17.37■□□□□ 0.37
CAPN1-221ENST00000531068 ATP10AO60312 1499 aa17.36■□□□□ 0.37
CAPN1-221ENST00000531068 GPATCH8Q9UKJ3 1502 aaKnown RBP17.36■□□□□ 0.37
CAPN1-221ENST00000531068 MLECQ14165 292 aa17.34■□□□□ 0.37
CAPN1-221ENST00000531068 MYO5CQ9NQX4 1742 aa17.34■□□□□ 0.37
CAPN1-221ENST00000531068 RICTORQ6R327 1708 aa17.33■□□□□ 0.37
CAPN1-221ENST00000531068 ARHGEF40Q8TER5 1519 aa17.33■□□□□ 0.37
CAPN1-221ENST00000531068 HNRNPMP52272 730 aaKnown RBP eCLIP17.33■□□□□ 0.36
CAPN1-221ENST00000531068 LRRIQ1Q96JM4 1722 aa17.33■□□□□ 0.36
CAPN1-221ENST00000531068 VPS8Q8N3P4 1428 aa17.32■□□□□ 0.36
CAPN1-221ENST00000531068 TRAPPC8Q9Y2L5 1435 aa17.32■□□□□ 0.36
CAPN1-221ENST00000531068 C9orf84Q5VXU9 1444 aa17.31■□□□□ 0.36
CAPN1-221ENST00000531068 PTPRMP28827 1452 aa17.31■□□□□ 0.36
CAPN1-221ENST00000531068 MLH3Q9UHC1 1453 aa17.31■□□□□ 0.36
CAPN1-221ENST00000531068 KIAA1107Q9UPP5 1409 aa17.3■□□□□ 0.36
CAPN1-221ENST00000531068 SPAG9O60271 1321 aaKnown RBP17.3■□□□□ 0.36
CAPN1-221ENST00000531068 PLEKHH2Q8IVE3 1493 aa17.3■□□□□ 0.36
CAPN1-221ENST00000531068 APLP2Q06481 763 aa17.29■□□□□ 0.36
CAPN1-221ENST00000531068 ARHGEF12Q9NZN5 1544 aa17.28■□□□□ 0.36
CAPN1-221ENST00000531068 RSPH4AQ5TD94 716 aa17.27■□□□□ 0.36
CAPN1-221ENST00000531068 PREX2Q70Z35 1606 aa17.27■□□□□ 0.36
CAPN1-221ENST00000531068 EHBP1L1Q8N3D4 1523 aa17.26■□□□□ 0.35
CAPN1-221ENST00000531068 KDM5CP41229 1560 aa17.26■□□□□ 0.35
CAPN1-221ENST00000531068 ABCC1P33527 1531 aa17.26■□□□□ 0.35
CAPN1-221ENST00000531068 ZNF644Q9H582 1327 aaPredicted RBP17.25■□□□□ 0.35
CAPN1-221ENST00000531068 ESF1Q9H501 851 aaKnown RBP17.25■□□□□ 0.35
CAPN1-221ENST00000531068 ADAMTSL3P82987 1691 aa17.25■□□□□ 0.35
CAPN1-221ENST00000531068 CDC42BPBQ9Y5S2 1711 aa17.24■□□□□ 0.35
CAPN1-221ENST00000531068 PLPPR3Q6T4P5 718 aa17.23■□□□□ 0.35
CAPN1-221ENST00000531068 BCORL1Q5H9F3 1711 aa17.22■□□□□ 0.35
CAPN1-221ENST00000531068 KANK4Q5T7N3 995 aaPredicted RBP17.21■□□□□ 0.35
CAPN1-221ENST00000531068 HECW2Q9P2P5 1572 aa17.2■□□□□ 0.34
CAPN1-221ENST00000531068 NCOA2Q15596 1464 aa17.2■□□□□ 0.34
CAPN1-221ENST00000531068 MAP3K1Q13233 1512 aa17.2■□□□□ 0.34
CAPN1-221ENST00000531068 LRRC9Q6ZRR7 1453 aa17.19■□□□□ 0.34
CAPN1-221ENST00000531068 SAMD9LQ8IVG5 1584 aa17.19■□□□□ 0.34
CAPN1-221ENST00000531068 SYCP2Q9BX26 1530 aa17.18■□□□□ 0.34
CAPN1-221ENST00000531068 TSPY4P0CV99 314 aa17.18■□□□□ 0.34
CAPN1-221ENST00000531068 TSPY10P0CW01 314 aa17.18■□□□□ 0.34
CAPN1-221ENST00000531068 TIAM1Q13009 1591 aa17.18■□□□□ 0.34
CAPN1-221ENST00000531068 CDC42BPAQ5VT25 1732 aa17.18■□□□□ 0.34
CAPN1-221ENST00000531068 MADDQ8WXG6 1647 aa17.18■□□□□ 0.34
CAPN1-221ENST00000531068 AGLP35573 1532 aa17.16■□□□□ 0.34
CAPN1-221ENST00000531068 REREQ9P2R6 1566 aa17.16■□□□□ 0.34
CAPN1-221ENST00000531068 CEBPAP49715 358 aaPredicted RBP17.16■□□□□ 0.34
CAPN1-221ENST00000531068 MBD5Q9P267 1494 aa17.16■□□□□ 0.34
CAPN1-221ENST00000531068 DIP2CQ9Y2E4 1556 aa17.15■□□□□ 0.34
CAPN1-221ENST00000531068 RTEL1-TNFRSF6BF6WH68 1400 aa17.14■□□□□ 0.33
CAPN1-221ENST00000531068 PPP6R1Q9UPN7 881 aa17.14■□□□□ 0.33
CAPN1-221ENST00000531068 ITSN2Q9NZM3 1697 aa17.13■□□□□ 0.33
CAPN1-221ENST00000531068 A2MP01023 1474 aa17.12■□□□□ 0.33
CAPN1-221ENST00000531068 SUPT6HQ7KZ85 1726 aaKnown RBP17.11■□□□□ 0.33
CAPN1-221ENST00000531068 GGT6Q6P531 493 aa17.11■□□□□ 0.33
CAPN1-221ENST00000531068 CNTLNQ9NXG0 1405 aa17.11■□□□□ 0.33
CAPN1-221ENST00000531068 ATP7AQ04656 1500 aa17.11■□□□□ 0.33
CAPN1-221ENST00000531068 DHX29Q7Z478 1369 aaKnown RBP17.1■□□□□ 0.33
CAPN1-221ENST00000531068 MIA2Q96PC5 1412 aa17.1■□□□□ 0.33
CAPN1-221ENST00000531068 ABCA6Q8N139 1617 aa17.1■□□□□ 0.33
CAPN1-221ENST00000531068 CAMSAP2Q08AD1 1489 aa17.09■□□□□ 0.33
CAPN1-221ENST00000531068 RIMS1Q86UR5 1692 aaKnown RBP17.09■□□□□ 0.33
CAPN1-221ENST00000531068 SIGLEC1Q9BZZ2 1709 aa17.09■□□□□ 0.33
CAPN1-221ENST00000531068 KIDINS220Q9ULH0 1771 aa17.08■□□□□ 0.33
CAPN1-221ENST00000531068 CCDC141Q6ZP82 1450 aa17.08■□□□□ 0.32
CAPN1-221ENST00000531068 MYOM3Q5VTT5 1437 aa17.08■□□□□ 0.32
CAPN1-221ENST00000531068 HSPA2P54652 639 aa17.08■□□□□ 0.32
CAPN1-221ENST00000531068 LMTK3Q96Q04 1460 aa17.06■□□□□ 0.32
CAPN1-221ENST00000531068 ZMYM3Q14202 1370 aa17.05■□□□□ 0.32
CAPN1-221ENST00000531068 KIF3BO15066 747 aa17.05■□□□□ 0.32
CAPN1-221ENST00000531068 INO80Q9ULG1 1556 aaPredicted RBP17.02■□□□□ 0.32
CAPN1-221ENST00000531068 DMRT2Q9Y5R5 561 aa17.01■□□□□ 0.31
CAPN1-221ENST00000531068 UHRF1BP1Q6BDS2 1440 aa17.01■□□□□ 0.31
CAPN1-221ENST00000531068 FER1L4A9Z1Z3 1794 aa17■□□□□ 0.31
CAPN1-221ENST00000531068 WASHC2CQ9Y4E1 1318 aa16.99■□□□□ 0.31
CAPN1-221ENST00000531068 ARHGEF5Q12774 1597 aa16.99■□□□□ 0.31
CAPN1-221ENST00000531068 PLXNC1O60486 1568 aa16.98■□□□□ 0.31
CAPN1-221ENST00000531068 NPATQ14207 1427 aa16.97■□□□□ 0.31
CAPN1-221ENST00000531068 FGD6Q6ZV73 1430 aa16.94■□□□□ 0.3
CAPN1-221ENST00000531068 RRP7BPQ9NSQ0 103 aa16.93■□□□□ 0.3
CAPN1-221ENST00000531068 ADGBQ8N7X0 1667 aa16.92■□□□□ 0.3
CAPN1-221ENST00000531068 FAM50AQ14320 339 aaKnown RBP16.92■□□□□ 0.3
CAPN1-221ENST00000531068 ABCC5O15440 1437 aa16.92■□□□□ 0.3
CAPN1-221ENST00000531068 PTPRKQ15262 1439 aa16.91■□□□□ 0.3
CAPN1-221ENST00000531068 ILDR1Q86SU0 546 aaPredicted RBP16.91■□□□□ 0.3
CAPN1-221ENST00000531068 CHIC2Q9UKJ5 165 aa16.9■□□□□ 0.3
CAPN1-221ENST00000531068 KIF15Q9NS87 1388 aa16.89■□□□□ 0.3
CAPN1-221ENST00000531068 TCOF1Q13428 1488 aaKnown RBP16.89■□□□□ 0.29
CAPN1-221ENST00000531068 ANKRD30AQ9BXX3 1397 aa16.89■□□□□ 0.29
CAPN1-221ENST00000531068 SETD1BQ9UPS6 1966 aaKnown RBP16.88■□□□□ 0.29
CAPN1-221ENST00000531068 FBXO31Q5XUX0 539 aaPredicted RBP16.88■□□□□ 0.29
CAPN1-221ENST00000531068 MAST1Q9Y2H9 1570 aa16.88■□□□□ 0.29
CAPN1-221ENST00000531068 DAPK1P53355 1430 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 108.7 ms