RNA–Protein interactions for RNA: ENST00000531046.1

LINC01016-204, Transcript of long intergenic non-protein coding RNA 1016, humanhuman

TSL 1 (best)

Gene LINC01016, Length 822 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01016-204ENST00000531046 KDM4FA0A1W2PPD8 638 aa20.59■□□□□ 0.89
LINC01016-204ENST00000531046 CDC42BPBQ9Y5S2 1711 aa20.58■□□□□ 0.89
LINC01016-204ENST00000531046 RICTORQ6R327 1708 aa20.58■□□□□ 0.88
LINC01016-204ENST00000531046 PREX2Q70Z35 1606 aa20.56■□□□□ 0.88
LINC01016-204ENST00000531046 CDC42BPAQ5VT25 1732 aa20.56■□□□□ 0.88
LINC01016-204ENST00000531046 EHBP1L1Q8N3D4 1523 aa20.53■□□□□ 0.88
LINC01016-204ENST00000531046 POGZQ7Z3K3 1410 aa20.53■□□□□ 0.88
LINC01016-204ENST00000531046 TIAM1Q13009 1591 aa20.52■□□□□ 0.88
LINC01016-204ENST00000531046 ZNF777Q9ULD5 760 aaPredicted RBP20.52■□□□□ 0.88
LINC01016-204ENST00000531046 GPATCH8Q9UKJ3 1502 aaKnown RBP20.52■□□□□ 0.87
LINC01016-204ENST00000531046 CCNB3Q8WWL7 1395 aa20.51■□□□□ 0.87
LINC01016-204ENST00000531046 AFAP1Q8N556 730 aa20.49■□□□□ 0.87
LINC01016-204ENST00000531046 ZMYM4Q5VZL5 1548 aa20.48■□□□□ 0.87
LINC01016-204ENST00000531046 YEATS2Q9ULM3 1422 aa20.48■□□□□ 0.87
LINC01016-204ENST00000531046 CFDP1Q9UEE9 299 aaPredicted RBP20.47■□□□□ 0.87
LINC01016-204ENST00000531046 ARHGEF40Q8TER5 1519 aa20.47■□□□□ 0.87
LINC01016-204ENST00000531046 ARHGEF12Q9NZN5 1544 aa20.47■□□□□ 0.87
LINC01016-204ENST00000531046 ABCC1P33527 1531 aa20.46■□□□□ 0.87
LINC01016-204ENST00000531046 ZFYVE16Q7Z3T8 1539 aa20.46■□□□□ 0.87
LINC01016-204ENST00000531046 ZNF518AQ6AHZ1 1483 aa20.45■□□□□ 0.86
LINC01016-204ENST00000531046 KANK4Q5T7N3 995 aaPredicted RBP20.45■□□□□ 0.86
LINC01016-204ENST00000531046 ARID4BQ4LE39 1312 aaPredicted RBP20.45■□□□□ 0.86
LINC01016-204ENST00000531046 TRAPPC8Q9Y2L5 1435 aa20.44■□□□□ 0.86
LINC01016-204ENST00000531046 LRRC9Q6ZRR7 1453 aa20.44■□□□□ 0.86
LINC01016-204ENST00000531046 SAMD9LQ8IVG5 1584 aa20.44■□□□□ 0.86
LINC01016-204ENST00000531046 MYT1LQ9UL68 1186 aa20.44■□□□□ 0.86
LINC01016-204ENST00000531046 SUPT6HQ7KZ85 1726 aaKnown RBP20.44■□□□□ 0.86
LINC01016-204ENST00000531046 NCOA2Q15596 1464 aa20.43■□□□□ 0.86
LINC01016-204ENST00000531046 MAGI2Q86UL8 1455 aa20.43■□□□□ 0.86
LINC01016-204ENST00000531046 ITSN2Q9NZM3 1697 aa20.42■□□□□ 0.86
LINC01016-204ENST00000531046 HNRNPMP52272 730 aaKnown RBP eCLIP20.42■□□□□ 0.86
LINC01016-204ENST00000531046 APLP2Q06481 763 aa20.41■□□□□ 0.86
LINC01016-204ENST00000531046 ZNF644Q9H582 1327 aaPredicted RBP20.41■□□□□ 0.86
LINC01016-204ENST00000531046 MAP3K1Q13233 1512 aa20.41■□□□□ 0.86
LINC01016-204ENST00000531046 SYCP2Q9BX26 1530 aa20.41■□□□□ 0.86
LINC01016-204ENST00000531046 KDM5CP41229 1560 aa20.41■□□□□ 0.86
LINC01016-204ENST00000531046 HECW2Q9P2P5 1572 aa20.37■□□□□ 0.85
LINC01016-204ENST00000531046 SIGLEC1Q9BZZ2 1709 aa20.36■□□□□ 0.85
LINC01016-204ENST00000531046 ATP10AO60312 1499 aa20.36■□□□□ 0.85
LINC01016-204ENST00000531046 PLEKHH2Q8IVE3 1493 aa20.35■□□□□ 0.85
LINC01016-204ENST00000531046 KIAA1107Q9UPP5 1409 aa20.35■□□□□ 0.85
LINC01016-204ENST00000531046 BCORL1Q5H9F3 1711 aa20.34■□□□□ 0.85
LINC01016-204ENST00000531046 MLH3Q9UHC1 1453 aa20.34■□□□□ 0.85
LINC01016-204ENST00000531046 MLECQ14165 292 aa20.33■□□□□ 0.85
LINC01016-204ENST00000531046 C9orf84Q5VXU9 1444 aa20.33■□□□□ 0.84
LINC01016-204ENST00000531046 ABCA6Q8N139 1617 aa20.32■□□□□ 0.84
LINC01016-204ENST00000531046 DIP2CQ9Y2E4 1556 aa20.32■□□□□ 0.84
LINC01016-204ENST00000531046 ADAMTSL3P82987 1691 aa20.32■□□□□ 0.84
LINC01016-204ENST00000531046 SPAG9O60271 1321 aaKnown RBP20.31■□□□□ 0.84
LINC01016-204ENST00000531046 KIDINS220Q9ULH0 1771 aa20.31■□□□□ 0.84
LINC01016-204ENST00000531046 CAMSAP2Q08AD1 1489 aa20.29■□□□□ 0.84
LINC01016-204ENST00000531046 MADDQ8WXG6 1647 aa20.28■□□□□ 0.84
LINC01016-204ENST00000531046 MBD5Q9P267 1494 aa20.28■□□□□ 0.84
LINC01016-204ENST00000531046 ATP7AQ04656 1500 aa20.25■□□□□ 0.83
LINC01016-204ENST00000531046 MYOM3Q5VTT5 1437 aa20.25■□□□□ 0.83
LINC01016-204ENST00000531046 PTPRMP28827 1452 aa20.24■□□□□ 0.83
LINC01016-204ENST00000531046 INO80Q9ULG1 1556 aaPredicted RBP20.23■□□□□ 0.83
LINC01016-204ENST00000531046 RIMS1Q86UR5 1692 aaKnown RBP20.22■□□□□ 0.83
LINC01016-204ENST00000531046 REREQ9P2R6 1566 aa20.21■□□□□ 0.83
LINC01016-204ENST00000531046 PLPPR3Q6T4P5 718 aa20.21■□□□□ 0.83
LINC01016-204ENST00000531046 CCDC141Q6ZP82 1450 aa20.21■□□□□ 0.83
LINC01016-204ENST00000531046 MIA2Q96PC5 1412 aa20.19■□□□□ 0.82
LINC01016-204ENST00000531046 FER1L4A9Z1Z3 1794 aa20.18■□□□□ 0.82
LINC01016-204ENST00000531046 RSPH4AQ5TD94 716 aa20.17■□□□□ 0.82
LINC01016-204ENST00000531046 AGLP35573 1532 aa20.17■□□□□ 0.82
LINC01016-204ENST00000531046 ARHGEF5Q12774 1597 aa20.17■□□□□ 0.82
LINC01016-204ENST00000531046 RTEL1-TNFRSF6BF6WH68 1400 aa20.16■□□□□ 0.82
LINC01016-204ENST00000531046 A2MP01023 1474 aa20.16■□□□□ 0.82
LINC01016-204ENST00000531046 TSPY4P0CV99 314 aa20.15■□□□□ 0.82
LINC01016-204ENST00000531046 TSPY10P0CW01 314 aa20.15■□□□□ 0.82
LINC01016-204ENST00000531046 PPARGC1BQ86YN6 1023 aaKnown RBP20.15■□□□□ 0.82
LINC01016-204ENST00000531046 PTPN23Q9H3S7 1636 aa20.13■□□□□ 0.81
LINC01016-204ENST00000531046 FGD6Q6ZV73 1430 aa20.13■□□□□ 0.81
LINC01016-204ENST00000531046 ADGBQ8N7X0 1667 aa20.12■□□□□ 0.81
LINC01016-204ENST00000531046 PLXNC1O60486 1568 aa20.12■□□□□ 0.81
LINC01016-204ENST00000531046 CEBPAP49715 358 aaPredicted RBP20.1■□□□□ 0.81
LINC01016-204ENST00000531046 ESF1Q9H501 851 aaKnown RBP20.09■□□□□ 0.81
LINC01016-204ENST00000531046 DHX29Q7Z478 1369 aaKnown RBP20.08■□□□□ 0.81
LINC01016-204ENST00000531046 GGT6Q6P531 493 aa20.08■□□□□ 0.81
LINC01016-204ENST00000531046 TCOF1Q13428 1488 aaKnown RBP20.06■□□□□ 0.8
LINC01016-204ENST00000531046 MAST1Q9Y2H9 1570 aa20.05■□□□□ 0.8
LINC01016-204ENST00000531046 ABCC5O15440 1437 aa20.05■□□□□ 0.8
LINC01016-204ENST00000531046 FAM50AQ14320 339 aaKnown RBP20.05■□□□□ 0.8
LINC01016-204ENST00000531046 KIF3BO15066 747 aa20.04■□□□□ 0.8
LINC01016-204ENST00000531046 DAPK1P53355 1430 aa20.02■□□□□ 0.8
LINC01016-204ENST00000531046 DNMT1P26358 1616 aaKnown RBP20.02■□□□□ 0.79
LINC01016-204ENST00000531046 CROCC2H7BZ55 1655 aa20.01■□□□□ 0.79
LINC01016-204ENST00000531046 CHIC2Q9UKJ5 165 aa20.01■□□□□ 0.79
LINC01016-204ENST00000531046 C3P01024 1663 aa20■□□□□ 0.79
LINC01016-204ENST00000531046 CNTLNQ9NXG0 1405 aa20■□□□□ 0.79
LINC01016-204ENST00000531046 RRP7BPQ9NSQ0 103 aa19.99■□□□□ 0.79
LINC01016-204ENST00000531046 SHANK2Q9UPX8 1470 aa19.99■□□□□ 0.79
LINC01016-204ENST00000531046 CLTCQ00610 1675 aaKnown RBP19.98■□□□□ 0.79
LINC01016-204ENST00000531046 LMTK3Q96Q04 1460 aa19.98■□□□□ 0.79
LINC01016-204ENST00000531046 ZMYM3Q14202 1370 aa19.96■□□□□ 0.79
LINC01016-204ENST00000531046 KIF15Q9NS87 1388 aa19.95■□□□□ 0.79
LINC01016-204ENST00000531046 HSPA2P54652 639 aa19.95■□□□□ 0.78
LINC01016-204ENST00000531046 MROH2AA6NES4 1674 aa19.94■□□□□ 0.78
LINC01016-204ENST00000531046 PPP6R1Q9UPN7 881 aa19.94■□□□□ 0.78
LINC01016-204ENST00000531046 DUOX2Q9NRD8 1548 aa19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms