RNA–Protein interactions for RNA: ENST00000531041.1

SF3B2-211, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 1 (best)

Gene SF3B2, Length 1,440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-211ENST00000531041 ARHGAP5Q13017 1502 aa26.26■■□□□ 1.79
SF3B2-211ENST00000531041 FANCAO15360 1455 aa26.25■■□□□ 1.79
SF3B2-211ENST00000531041 PPARGC1BQ86YN6 1023 aaKnown RBP26.24■■□□□ 1.79
SF3B2-211ENST00000531041 NEO1Q92859 1461 aa26.23■■□□□ 1.79
SF3B2-211ENST00000531041 MYOM3Q5VTT5 1437 aa26.22■■□□□ 1.79
SF3B2-211ENST00000531041 PHLDB1Q86UU1 1377 aa26.21■■□□□ 1.79
SF3B2-211ENST00000531041 EFCAB2Q5VUJ9 269 aa26.21■■□□□ 1.79
SF3B2-211ENST00000531041 CFDP1Q9UEE9 299 aaPredicted RBP26.19■■□□□ 1.78
SF3B2-211ENST00000531041 MIA2Q96PC5 1412 aa26.17■■□□□ 1.78
SF3B2-211ENST00000531041 SAMD9LQ8IVG5 1584 aa26.17■■□□□ 1.78
SF3B2-211ENST00000531041 AKNAQ7Z591 1439 aa26.16■■□□□ 1.78
SF3B2-211ENST00000531041 ABCC1P33527 1531 aa26.11■■□□□ 1.77
SF3B2-211ENST00000531041 FGD6Q6ZV73 1430 aa26.11■■□□□ 1.77
SF3B2-211ENST00000531041 ADGRL1O94910 1474 aa26.11■■□□□ 1.77
SF3B2-211ENST00000531041 PTPN23Q9H3S7 1636 aa26.11■■□□□ 1.77
SF3B2-211ENST00000531041 PLEKHH2Q8IVE3 1493 aa26.1■■□□□ 1.77
SF3B2-211ENST00000531041 KDM6BO15054 1643 aa26.09■■□□□ 1.77
SF3B2-211ENST00000531041 ZNF777Q9ULD5 760 aaPredicted RBP26.09■■□□□ 1.77
SF3B2-211ENST00000531041 CAMSAP2Q08AD1 1489 aa26.09■■□□□ 1.77
SF3B2-211ENST00000531041 RICTORQ6R327 1708 aa26.08■■□□□ 1.76
SF3B2-211ENST00000531041 KIAA1107Q9UPP5 1409 aa26.07■■□□□ 1.76
SF3B2-211ENST00000531041 ZNF644Q9H582 1327 aaPredicted RBP26.06■■□□□ 1.76
SF3B2-211ENST00000531041 SCAPERQ9BY12 1400 aa26.06■■□□□ 1.76
SF3B2-211ENST00000531041 COL17A1Q9UMD9 1497 aaPredicted RBP26.06■■□□□ 1.76
SF3B2-211ENST00000531041 TCOF1Q13428 1488 aaKnown RBP26.05■■□□□ 1.76
SF3B2-211ENST00000531041 SYCP2Q9BX26 1530 aa26.05■■□□□ 1.76
SF3B2-211ENST00000531041 ARHGEF12Q9NZN5 1544 aa26.05■■□□□ 1.76
SF3B2-211ENST00000531041 DENND4BO75064 1496 aaPredicted RBP26.03■■□□□ 1.76
SF3B2-211ENST00000531041 FRMPD1Q5SYB0 1578 aa26.01■■□□□ 1.75
SF3B2-211ENST00000531041 ARHGEF5Q12774 1597 aa26■■□□□ 1.75
SF3B2-211ENST00000531041 MBD5Q9P267 1494 aa25.99■■□□□ 1.75
SF3B2-211ENST00000531041 POGZQ7Z3K3 1410 aa25.99■■□□□ 1.75
SF3B2-211ENST00000531041 RRBP1Q9P2E9 1410 aaKnown RBP25.99■■□□□ 1.75
SF3B2-211ENST00000531041 HNRNPMP52272 730 aaKnown RBP eCLIP25.98■■□□□ 1.75
SF3B2-211ENST00000531041 ZNF518AQ6AHZ1 1483 aa25.98■■□□□ 1.75
SF3B2-211ENST00000531041 TRAPPC8Q9Y2L5 1435 aa25.96■■□□□ 1.75
SF3B2-211ENST00000531041 KDM5CP41229 1560 aa25.96■■□□□ 1.75
SF3B2-211ENST00000531041 RAPGEF3O95398 923 aa25.96■■□□□ 1.75
SF3B2-211ENST00000531041 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.95■■□□□ 1.75
SF3B2-211ENST00000531041 ZMYM4Q5VZL5 1548 aa25.94■■□□□ 1.74
SF3B2-211ENST00000531041 DNMT1P26358 1616 aaKnown RBP25.94■■□□□ 1.74
SF3B2-211ENST00000531041 RSPH4AQ5TD94 716 aa25.94■■□□□ 1.74
SF3B2-211ENST00000531041 CROCC2H7BZ55 1655 aa25.93■■□□□ 1.74
SF3B2-211ENST00000531041 CCDC141Q6ZP82 1450 aa25.92■■□□□ 1.74
SF3B2-211ENST00000531041 FAM50AQ14320 339 aaKnown RBP25.91■■□□□ 1.74
SF3B2-211ENST00000531041 AFAP1Q8N556 730 aa25.91■■□□□ 1.74
SF3B2-211ENST00000531041 HECW2Q9P2P5 1572 aa25.89■■□□□ 1.74
SF3B2-211ENST00000531041 KIDINS220Q9ULH0 1771 aa25.88■■□□□ 1.73
SF3B2-211ENST00000531041 MAGI2Q86UL8 1455 aa25.86■■□□□ 1.73
SF3B2-211ENST00000531041 ABCC5O15440 1437 aa25.86■■□□□ 1.73
SF3B2-211ENST00000531041 DAPK1P53355 1430 aa25.86■■□□□ 1.73
SF3B2-211ENST00000531041 INO80Q9ULG1 1556 aaPredicted RBP25.86■■□□□ 1.73
SF3B2-211ENST00000531041 MAST1Q9Y2H9 1570 aa25.86■■□□□ 1.73
SF3B2-211ENST00000531041 MLH3Q9UHC1 1453 aa25.86■■□□□ 1.73
SF3B2-211ENST00000531041 SHANK2Q9UPX8 1470 aa25.82■■□□□ 1.72
SF3B2-211ENST00000531041 ATP7AQ04656 1500 aa25.82■■□□□ 1.72
SF3B2-211ENST00000531041 ZFYVE16Q7Z3T8 1539 aa25.82■■□□□ 1.72
SF3B2-211ENST00000531041 SPAG9O60271 1321 aaKnown RBP25.82■■□□□ 1.72
SF3B2-211ENST00000531041 TSPY4P0CV99 314 aa25.81■■□□□ 1.72
SF3B2-211ENST00000531041 TSPY10P0CW01 314 aa25.81■■□□□ 1.72
SF3B2-211ENST00000531041 RTEL1-TNFRSF6BF6WH68 1400 aa25.81■■□□□ 1.72
SF3B2-211ENST00000531041 ADGBQ8N7X0 1667 aa25.8■■□□□ 1.72
SF3B2-211ENST00000531041 C9orf84Q5VXU9 1444 aa25.79■■□□□ 1.72
SF3B2-211ENST00000531041 ARHGEF40Q8TER5 1519 aa25.79■■□□□ 1.72
SF3B2-211ENST00000531041 ABCA6Q8N139 1617 aa25.78■■□□□ 1.72
SF3B2-211ENST00000531041 YEATS2Q9ULM3 1422 aa25.76■■□□□ 1.71
SF3B2-211ENST00000531041 PLXNC1O60486 1568 aa25.76■■□□□ 1.71
SF3B2-211ENST00000531041 DIP2CQ9Y2E4 1556 aa25.76■■□□□ 1.71
SF3B2-211ENST00000531041 MYT1LQ9UL68 1186 aa25.75■■□□□ 1.71
SF3B2-211ENST00000531041 PTPRKQ15262 1439 aa25.74■■□□□ 1.71
SF3B2-211ENST00000531041 ADGRL2O95490 1459 aa25.72■■□□□ 1.71
SF3B2-211ENST00000531041 ITGAEP38570 1179 aa25.71■■□□□ 1.71
SF3B2-211ENST00000531041 ATP10AO60312 1499 aa25.7■■□□□ 1.7
SF3B2-211ENST00000531041 REREQ9P2R6 1566 aa25.69■■□□□ 1.7
SF3B2-211ENST00000531041 CHIC2Q9UKJ5 165 aa25.68■■□□□ 1.7
SF3B2-211ENST00000531041 NCOA1Q15788 1441 aa25.67■■□□□ 1.7
SF3B2-211ENST00000531041 ANKRD30AQ9BXX3 1397 aa25.67■■□□□ 1.7
SF3B2-211ENST00000531041 ROCK1Q13464 1354 aa25.66■■□□□ 1.7
SF3B2-211ENST00000531041 SIGLEC1Q9BZZ2 1709 aa25.65■■□□□ 1.7
SF3B2-211ENST00000531041 A2MP01023 1474 aa25.63■■□□□ 1.69
SF3B2-211ENST00000531041 DUOX2Q9NRD8 1548 aa25.62■■□□□ 1.69
SF3B2-211ENST00000531041 KIF15Q9NS87 1388 aa25.61■■□□□ 1.69
SF3B2-211ENST00000531041 RRP7BPQ9NSQ0 103 aa25.6■■□□□ 1.69
SF3B2-211ENST00000531041 DHX29Q7Z478 1369 aaKnown RBP25.6■■□□□ 1.69
SF3B2-211ENST00000531041 GCC2Q8IWJ2 1684 aa25.59■■□□□ 1.69
SF3B2-211ENST00000531041 BCORL1Q5H9F3 1711 aa25.59■■□□□ 1.69
SF3B2-211ENST00000531041 AGLP35573 1532 aa25.58■■□□□ 1.69
SF3B2-211ENST00000531041 TRIM26Q12899 539 aaPredicted RBP25.58■■□□□ 1.69
SF3B2-211ENST00000531041 EIF2AK4Q9P2K8 1649 aaKnown RBP25.57■■□□□ 1.68
SF3B2-211ENST00000531041 ERBINQ96RT1 1412 aa25.54■■□□□ 1.68
SF3B2-211ENST00000531041 HFM1A2PYH4 1435 aa25.52■■□□□ 1.68
SF3B2-211ENST00000531041 NAIPQ13075 1403 aa25.51■■□□□ 1.67
SF3B2-211ENST00000531041 ANKRD50Q9ULJ7 1429 aa25.51■■□□□ 1.67
SF3B2-211ENST00000531041 RNF17Q9BXT8 1623 aaKnown RBP25.48■■□□□ 1.67
SF3B2-211ENST00000531041 ARID4BQ4LE39 1312 aaPredicted RBP25.48■■□□□ 1.67
SF3B2-211ENST00000531041 DEPDC5O75140 1603 aa25.46■■□□□ 1.67
SF3B2-211ENST00000531041 KIF3BO15066 747 aa25.46■■□□□ 1.67
SF3B2-211ENST00000531041 MROH1Q8NDA8 1641 aa25.41■■□□□ 1.66
SF3B2-211ENST00000531041 ADAMTSL3P82987 1691 aa25.41■■□□□ 1.66
SF3B2-211ENST00000531041 UNC13BO14795 1591 aa25.4■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms