RNA–Protein interactions for RNA: ENST00000530996.5

CHMP4A-204, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 3 BASIC

Gene CHMP4A, Length 967 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-204ENST00000530996 RIMS1Q86UR5 1692 aaKnown RBP26.01■■□□□ 1.75
CHMP4A-204ENST00000530996 PLPPR3Q6T4P5 718 aa26■■□□□ 1.75
CHMP4A-204ENST00000530996 CLIP1P30622 1438 aa25.99■■□□□ 1.75
CHMP4A-204ENST00000530996 MAGI2Q86UL8 1455 aa25.98■■□□□ 1.75
CHMP4A-204ENST00000530996 PCF11O94913 1555 aaKnown RBP25.98■■□□□ 1.75
CHMP4A-204ENST00000530996 MYO5CQ9NQX4 1742 aa25.97■■□□□ 1.75
CHMP4A-204ENST00000530996 TROQ12816 1431 aaPredicted RBP25.96■■□□□ 1.75
CHMP4A-204ENST00000530996 EFCAB2Q5VUJ9 269 aa25.95■■□□□ 1.74
CHMP4A-204ENST00000530996 ARHGAP5Q13017 1502 aa25.94■■□□□ 1.74
CHMP4A-204ENST00000530996 MLECQ14165 292 aa25.94■■□□□ 1.74
CHMP4A-204ENST00000530996 LMTK3Q96Q04 1460 aa25.91■■□□□ 1.74
CHMP4A-204ENST00000530996 SIGLEC1Q9BZZ2 1709 aa25.89■■□□□ 1.74
CHMP4A-204ENST00000530996 C9orf84Q5VXU9 1444 aa25.88■■□□□ 1.73
CHMP4A-204ENST00000530996 ZNF518AQ6AHZ1 1483 aa25.88■■□□□ 1.73
CHMP4A-204ENST00000530996 MYT1LQ9UL68 1186 aa25.87■■□□□ 1.73
CHMP4A-204ENST00000530996 ATP10AO60312 1499 aa25.85■■□□□ 1.73
CHMP4A-204ENST00000530996 CCDC18Q5T9S5 1454 aa25.85■■□□□ 1.73
CHMP4A-204ENST00000530996 FER1L4A9Z1Z3 1794 aa25.84■■□□□ 1.73
CHMP4A-204ENST00000530996 LRRIQ1Q96JM4 1722 aa25.83■■□□□ 1.73
CHMP4A-204ENST00000530996 CASKIN1Q8WXD9 1431 aa25.82■■□□□ 1.72
CHMP4A-204ENST00000530996 HSPA2P54652 639 aa25.8■■□□□ 1.72
CHMP4A-204ENST00000530996 KDM5CP41229 1560 aa25.79■■□□□ 1.72
CHMP4A-204ENST00000530996 ARHGEF12Q9NZN5 1544 aa25.78■■□□□ 1.72
CHMP4A-204ENST00000530996 AFAP1Q8N556 730 aa25.77■■□□□ 1.72
CHMP4A-204ENST00000530996 PREX2Q70Z35 1606 aa25.77■■□□□ 1.72
CHMP4A-204ENST00000530996 FYCO1Q9BQS8 1478 aa25.76■■□□□ 1.71
CHMP4A-204ENST00000530996 FBXO41Q8TF61 875 aa25.75■■□□□ 1.71
CHMP4A-204ENST00000530996 ABCC1P33527 1531 aa25.73■■□□□ 1.71
CHMP4A-204ENST00000530996 DIP2CQ9Y2E4 1556 aa25.73■■□□□ 1.71
CHMP4A-204ENST00000530996 CDC42BPBQ9Y5S2 1711 aa25.71■■□□□ 1.71
CHMP4A-204ENST00000530996 ABCA6Q8N139 1617 aa25.69■■□□□ 1.7
CHMP4A-204ENST00000530996 TRAPPC8Q9Y2L5 1435 aa25.68■■□□□ 1.7
CHMP4A-204ENST00000530996 ITSN2Q9NZM3 1697 aa25.67■■□□□ 1.7
CHMP4A-204ENST00000530996 MLH3Q9UHC1 1453 aa25.66■■□□□ 1.7
CHMP4A-204ENST00000530996 CEBPAP49715 358 aaPredicted RBP25.66■■□□□ 1.7
CHMP4A-204ENST00000530996 ZNF777Q9ULD5 760 aaPredicted RBP25.65■■□□□ 1.7
CHMP4A-204ENST00000530996 REREQ9P2R6 1566 aa25.64■■□□□ 1.69
CHMP4A-204ENST00000530996 ESF1Q9H501 851 aaKnown RBP25.63■■□□□ 1.69
CHMP4A-204ENST00000530996 PREX1Q8TCU6 1659 aa25.63■■□□□ 1.69
CHMP4A-204ENST00000530996 CDC42BPAQ5VT25 1732 aa25.61■■□□□ 1.69
CHMP4A-204ENST00000530996 UHRF1BP1Q6BDS2 1440 aa25.61■■□□□ 1.69
CHMP4A-204ENST00000530996 SYCP2Q9BX26 1530 aa25.6■■□□□ 1.69
CHMP4A-204ENST00000530996 AGLP35573 1532 aa25.57■■□□□ 1.68
CHMP4A-204ENST00000530996 SAMD9LQ8IVG5 1584 aa25.56■■□□□ 1.68
CHMP4A-204ENST00000530996 MTUS2Q5JR59 1369 aa25.56■■□□□ 1.68
CHMP4A-204ENST00000530996 CCNB3Q8WWL7 1395 aa25.54■■□□□ 1.68
CHMP4A-204ENST00000530996 KIDINS220Q9ULH0 1771 aa25.54■■□□□ 1.68
CHMP4A-204ENST00000530996 GPATCH8Q9UKJ3 1502 aaKnown RBP25.53■■□□□ 1.68
CHMP4A-204ENST00000530996 SPAG9O60271 1321 aaKnown RBP25.52■■□□□ 1.68
CHMP4A-204ENST00000530996 CFDP1Q9UEE9 299 aaPredicted RBP25.51■■□□□ 1.67
CHMP4A-204ENST00000530996 PLEKHH2Q8IVE3 1493 aa25.49■■□□□ 1.67
CHMP4A-204ENST00000530996 HNRNPMP52272 730 aaKnown RBP eCLIP25.49■■□□□ 1.67
CHMP4A-204ENST00000530996 C3P01024 1663 aa25.48■■□□□ 1.67
CHMP4A-204ENST00000530996 CNTLNQ9NXG0 1405 aa25.48■■□□□ 1.67
CHMP4A-204ENST00000530996 ATP7AQ04656 1500 aa25.47■■□□□ 1.67
CHMP4A-204ENST00000530996 CERKQ8TCT0 537 aa25.47■■□□□ 1.67
CHMP4A-204ENST00000530996 EHBP1L1Q8N3D4 1523 aa25.44■■□□□ 1.66
CHMP4A-204ENST00000530996 KIAA1107Q9UPP5 1409 aa25.44■■□□□ 1.66
CHMP4A-204ENST00000530996 DMRT2Q9Y5R5 561 aa25.43■■□□□ 1.66
CHMP4A-204ENST00000530996 CEP162Q5TB80 1403 aa25.42■■□□□ 1.66
CHMP4A-204ENST00000530996 INO80Q9ULG1 1556 aaPredicted RBP25.42■■□□□ 1.66
CHMP4A-204ENST00000530996 TIAM1Q13009 1591 aa25.4■■□□□ 1.66
CHMP4A-204ENST00000530996 SUPT6HQ7KZ85 1726 aaKnown RBP25.4■■□□□ 1.66
CHMP4A-204ENST00000530996 A2MP01023 1474 aa25.39■■□□□ 1.65
CHMP4A-204ENST00000530996 STRCQ7RTU9 1775 aa25.37■■□□□ 1.65
CHMP4A-204ENST00000530996 PLXNC1O60486 1568 aa25.36■■□□□ 1.65
CHMP4A-204ENST00000530996 MROH2AA6NES4 1674 aa25.35■■□□□ 1.65
CHMP4A-204ENST00000530996 NPATQ14207 1427 aa25.34■■□□□ 1.65
CHMP4A-204ENST00000530996 ZNF644Q9H582 1327 aaPredicted RBP25.33■■□□□ 1.64
CHMP4A-204ENST00000530996 ZMYM3Q14202 1370 aa25.32■■□□□ 1.64
CHMP4A-204ENST00000530996 GGT6Q6P531 493 aa25.32■■□□□ 1.64
CHMP4A-204ENST00000530996 SETD1BQ9UPS6 1966 aaKnown RBP25.32■■□□□ 1.64
CHMP4A-204ENST00000530996 PTPRTO14522 1441 aa25.3■■□□□ 1.64
CHMP4A-204ENST00000530996 NCOA1Q15788 1441 aa25.3■■□□□ 1.64
CHMP4A-204ENST00000530996 CLTCQ00610 1675 aaKnown RBP25.3■■□□□ 1.64
CHMP4A-204ENST00000530996 ADGBQ8N7X0 1667 aa25.28■■□□□ 1.64
CHMP4A-204ENST00000530996 CAMSAP1Q5T5Y3 1602 aa25.26■■□□□ 1.63
CHMP4A-204ENST00000530996 NCOA2Q15596 1464 aa25.26■■□□□ 1.63
CHMP4A-204ENST00000530996 MBD5Q9P267 1494 aa25.26■■□□□ 1.63
CHMP4A-204ENST00000530996 MYO3AQ8NEV4 1616 aa25.25■■□□□ 1.63
CHMP4A-204ENST00000530996 CAMSAP2Q08AD1 1489 aa25.24■■□□□ 1.63
CHMP4A-204ENST00000530996 CCDC141Q6ZP82 1450 aa25.23■■□□□ 1.63
CHMP4A-204ENST00000530996 RTEL1-TNFRSF6BF6WH68 1400 aa25.21■■□□□ 1.63
CHMP4A-204ENST00000530996 PTPRKQ15262 1439 aa25.2■■□□□ 1.63
CHMP4A-204ENST00000530996 CEP170BQ9Y4F5 1589 aaPredicted RBP25.19■■□□□ 1.62
CHMP4A-204ENST00000530996 ZNF142P52746 1687 aaPredicted RBP25.19■■□□□ 1.62
CHMP4A-204ENST00000530996 DHX29Q7Z478 1369 aaKnown RBP25.17■■□□□ 1.62
CHMP4A-204ENST00000530996 NCKAP5LQ9HCH0 1330 aa25.16■■□□□ 1.62
CHMP4A-204ENST00000530996 PPP6R1Q9UPN7 881 aa25.16■■□□□ 1.62
CHMP4A-204ENST00000530996 VPS8Q8N3P4 1428 aa25.14■■□□□ 1.62
CHMP4A-204ENST00000530996 KIF3BO15066 747 aa25.14■■□□□ 1.62
CHMP4A-204ENST00000530996 LTBP4Q8N2S1 1624 aa25.14■■□□□ 1.61
CHMP4A-204ENST00000530996 PLA2R1Q13018 1463 aa25.14■■□□□ 1.61
CHMP4A-204ENST00000530996 KDM5DQ9BY66 1539 aa25.12■■□□□ 1.61
CHMP4A-204ENST00000530996 PKD2Q13563 968 aa25.1■■□□□ 1.61
CHMP4A-204ENST00000530996 ZNF335Q9H4Z2 1342 aaPredicted RBP25.09■■□□□ 1.61
CHMP4A-204ENST00000530996 A2ML1A8K2U0 1454 aa25.09■■□□□ 1.61
CHMP4A-204ENST00000530996 LRRC9Q6ZRR7 1453 aa25.09■■□□□ 1.61
CHMP4A-204ENST00000530996 RSPH4AQ5TD94 716 aa25.08■■□□□ 1.61
CHMP4A-204ENST00000530996 ARHGEF5Q12774 1597 aa25.08■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms