RNA–Protein interactions for RNA: ENST00000530746.1

PPFIA1-216, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 3

Gene PPFIA1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-216ENST00000530746 ADGRL1O94910 1474 aa23.8■■□□□ 1.4
PPFIA1-216ENST00000530746 AEBP2Q6ZN18 517 aaPredicted RBP23.78■■□□□ 1.4
PPFIA1-216ENST00000530746 MTUS2Q5JR59 1369 aa23.78■■□□□ 1.4
PPFIA1-216ENST00000530746 SCAPERQ9BY12 1400 aa23.76■■□□□ 1.39
PPFIA1-216ENST00000530746 EHBP1L1Q8N3D4 1523 aa23.75■■□□□ 1.39
PPFIA1-216ENST00000530746 KDM4FA0A1W2PPD8 638 aa23.74■■□□□ 1.39
PPFIA1-216ENST00000530746 ZMYM4Q5VZL5 1548 aa23.73■■□□□ 1.39
PPFIA1-216ENST00000530746 TIAM1Q13009 1591 aa23.73■■□□□ 1.39
PPFIA1-216ENST00000530746 POGZQ7Z3K3 1410 aa23.72■■□□□ 1.39
PPFIA1-216ENST00000530746 GPATCH8Q9UKJ3 1502 aaKnown RBP23.7■■□□□ 1.38
PPFIA1-216ENST00000530746 ARHGEF40Q8TER5 1519 aa23.69■■□□□ 1.38
PPFIA1-216ENST00000530746 MAGI2Q86UL8 1455 aa23.67■■□□□ 1.38
PPFIA1-216ENST00000530746 CCNB3Q8WWL7 1395 aa23.66■■□□□ 1.38
PPFIA1-216ENST00000530746 ABCC1P33527 1531 aa23.66■■□□□ 1.38
PPFIA1-216ENST00000530746 ZNF518AQ6AHZ1 1483 aa23.66■■□□□ 1.38
PPFIA1-216ENST00000530746 SUPT6HQ7KZ85 1726 aaKnown RBP23.65■■□□□ 1.38
PPFIA1-216ENST00000530746 ITSN2Q9NZM3 1697 aa23.65■■□□□ 1.38
PPFIA1-216ENST00000530746 MAP3K1Q13233 1512 aa23.64■■□□□ 1.38
PPFIA1-216ENST00000530746 ZFYVE16Q7Z3T8 1539 aa23.64■■□□□ 1.38
PPFIA1-216ENST00000530746 KDM5CP41229 1560 aa23.63■■□□□ 1.37
PPFIA1-216ENST00000530746 SAMD9LQ8IVG5 1584 aa23.63■■□□□ 1.37
PPFIA1-216ENST00000530746 YEATS2Q9ULM3 1422 aa23.61■■□□□ 1.37
PPFIA1-216ENST00000530746 ARHGEF12Q9NZN5 1544 aa23.61■■□□□ 1.37
PPFIA1-216ENST00000530746 CFDP1Q9UEE9 299 aaPredicted RBP23.61■■□□□ 1.37
PPFIA1-216ENST00000530746 LRRC9Q6ZRR7 1453 aa23.61■■□□□ 1.37
PPFIA1-216ENST00000530746 AFAP1Q8N556 730 aa23.6■■□□□ 1.37
PPFIA1-216ENST00000530746 ZNF777Q9ULD5 760 aaPredicted RBP23.6■■□□□ 1.37
PPFIA1-216ENST00000530746 NCOA2Q15596 1464 aa23.59■■□□□ 1.37
PPFIA1-216ENST00000530746 TRAPPC8Q9Y2L5 1435 aa23.58■■□□□ 1.36
PPFIA1-216ENST00000530746 HECW2Q9P2P5 1572 aa23.57■■□□□ 1.36
PPFIA1-216ENST00000530746 SYCP2Q9BX26 1530 aa23.56■■□□□ 1.36
PPFIA1-216ENST00000530746 PLEKHH2Q8IVE3 1493 aa23.56■■□□□ 1.36
PPFIA1-216ENST00000530746 BCORL1Q5H9F3 1711 aa23.55■■□□□ 1.36
PPFIA1-216ENST00000530746 KIAA1107Q9UPP5 1409 aa23.54■■□□□ 1.36
PPFIA1-216ENST00000530746 MLH3Q9UHC1 1453 aa23.54■■□□□ 1.36
PPFIA1-216ENST00000530746 ARID4BQ4LE39 1312 aaPredicted RBP23.54■■□□□ 1.36
PPFIA1-216ENST00000530746 SIGLEC1Q9BZZ2 1709 aa23.53■■□□□ 1.36
PPFIA1-216ENST00000530746 KANK4Q5T7N3 995 aaPredicted RBP23.53■■□□□ 1.36
PPFIA1-216ENST00000530746 ATP10AO60312 1499 aa23.53■■□□□ 1.36
PPFIA1-216ENST00000530746 ADAMTSL3P82987 1691 aa23.53■■□□□ 1.36
PPFIA1-216ENST00000530746 APLP2Q06481 763 aa23.52■■□□□ 1.36
PPFIA1-216ENST00000530746 HNRNPMP52272 730 aaKnown RBP eCLIP23.5■■□□□ 1.355e-9■■■■■ 39.9
PPFIA1-216ENST00000530746 MYT1LQ9UL68 1186 aa23.5■■□□□ 1.35
PPFIA1-216ENST00000530746 KIDINS220Q9ULH0 1771 aa23.5■■□□□ 1.35
PPFIA1-216ENST00000530746 C9orf84Q5VXU9 1444 aa23.5■■□□□ 1.35
PPFIA1-216ENST00000530746 DIP2CQ9Y2E4 1556 aa23.49■■□□□ 1.35
PPFIA1-216ENST00000530746 ABCA6Q8N139 1617 aa23.48■■□□□ 1.35
PPFIA1-216ENST00000530746 ZNF644Q9H582 1327 aaPredicted RBP23.48■■□□□ 1.35
PPFIA1-216ENST00000530746 MADDQ8WXG6 1647 aa23.44■■□□□ 1.34
PPFIA1-216ENST00000530746 REREQ9P2R6 1566 aa23.44■■□□□ 1.34
PPFIA1-216ENST00000530746 CAMSAP2Q08AD1 1489 aa23.43■■□□□ 1.34
PPFIA1-216ENST00000530746 MBD5Q9P267 1494 aa23.43■■□□□ 1.34
PPFIA1-216ENST00000530746 SPAG9O60271 1321 aaKnown RBP23.42■■□□□ 1.34
PPFIA1-216ENST00000530746 INO80Q9ULG1 1556 aaPredicted RBP23.41■■□□□ 1.34
PPFIA1-216ENST00000530746 ATP7AQ04656 1500 aa23.41■■□□□ 1.34
PPFIA1-216ENST00000530746 MYOM3Q5VTT5 1437 aa23.39■■□□□ 1.33
PPFIA1-216ENST00000530746 RIMS1Q86UR5 1692 aaKnown RBP23.38■■□□□ 1.33
PPFIA1-216ENST00000530746 PTPRMP28827 1452 aa23.38■■□□□ 1.33
PPFIA1-216ENST00000530746 FER1L4A9Z1Z3 1794 aa23.37■■□□□ 1.33
PPFIA1-216ENST00000530746 MIA2Q96PC5 1412 aa23.36■■□□□ 1.33
PPFIA1-216ENST00000530746 MLECQ14165 292 aa23.36■■□□□ 1.33
PPFIA1-216ENST00000530746 AGLP35573 1532 aa23.36■■□□□ 1.33
PPFIA1-216ENST00000530746 RSPH4AQ5TD94 716 aa23.35■■□□□ 1.33
PPFIA1-216ENST00000530746 CCDC141Q6ZP82 1450 aa23.35■■□□□ 1.33
PPFIA1-216ENST00000530746 ARHGEF5Q12774 1597 aa23.35■■□□□ 1.33
PPFIA1-216ENST00000530746 ADGBQ8N7X0 1667 aa23.32■■□□□ 1.32
PPFIA1-216ENST00000530746 RTEL1-TNFRSF6BF6WH68 1400 aa23.32■■□□□ 1.32
PPFIA1-216ENST00000530746 PLXNC1O60486 1568 aa23.29■■□□□ 1.32
PPFIA1-216ENST00000530746 A2MP01023 1474 aa23.29■■□□□ 1.32
PPFIA1-216ENST00000530746 PTPN23Q9H3S7 1636 aa23.26■■□□□ 1.31
PPFIA1-216ENST00000530746 TSPY4P0CV99 314 aa23.24■■□□□ 1.31
PPFIA1-216ENST00000530746 TSPY10P0CW01 314 aa23.24■■□□□ 1.31
PPFIA1-216ENST00000530746 FGD6Q6ZV73 1430 aa23.24■■□□□ 1.31
PPFIA1-216ENST00000530746 MAST1Q9Y2H9 1570 aa23.23■■□□□ 1.31
PPFIA1-216ENST00000530746 TCOF1Q13428 1488 aaKnown RBP23.2■■□□□ 1.3
PPFIA1-216ENST00000530746 DHX29Q7Z478 1369 aaKnown RBP23.19■■□□□ 1.3
PPFIA1-216ENST00000530746 CROCC2H7BZ55 1655 aa23.19■■□□□ 1.3
PPFIA1-216ENST00000530746 PLPPR3Q6T4P5 718 aa23.17■■□□□ 1.3
PPFIA1-216ENST00000530746 ESF1Q9H501 851 aaKnown RBP23.17■■□□□ 1.3
PPFIA1-216ENST00000530746 C3P01024 1663 aa23.16■■□□□ 1.3
PPFIA1-216ENST00000530746 DNMT1P26358 1616 aaKnown RBP23.15■■□□□ 1.3
PPFIA1-216ENST00000530746 CNTLNQ9NXG0 1405 aa23.15■■□□□ 1.3
PPFIA1-216ENST00000530746 ABCC5O15440 1437 aa23.14■■□□□ 1.29
PPFIA1-216ENST00000530746 MROH2AA6NES4 1674 aa23.13■■□□□ 1.29
PPFIA1-216ENST00000530746 SHANK2Q9UPX8 1470 aa23.13■■□□□ 1.29
PPFIA1-216ENST00000530746 CEBPAP49715 358 aaPredicted RBP23.13■■□□□ 1.29
PPFIA1-216ENST00000530746 DAPK1P53355 1430 aa23.12■■□□□ 1.29
PPFIA1-216ENST00000530746 GGT6Q6P531 493 aa23.12■■□□□ 1.29
PPFIA1-216ENST00000530746 CLTCQ00610 1675 aaKnown RBP23.11■■□□□ 1.29
PPFIA1-216ENST00000530746 SETD1BQ9UPS6 1966 aaKnown RBP23.1■■□□□ 1.29
PPFIA1-216ENST00000530746 LMTK3Q96Q04 1460 aa23.1■■□□□ 1.29
PPFIA1-216ENST00000530746 PPP6R1Q9UPN7 881 aa23.09■■□□□ 1.29
PPFIA1-216ENST00000530746 KIF3BO15066 747 aa23.08■■□□□ 1.29
PPFIA1-216ENST00000530746 PREX1Q8TCU6 1659 aa23.08■■□□□ 1.29
PPFIA1-216ENST00000530746 PPARGC1BQ86YN6 1023 aaKnown RBP23.06■■□□□ 1.28
PPFIA1-216ENST00000530746 EIF2AK4Q9P2K8 1649 aaKnown RBP23.06■■□□□ 1.28
PPFIA1-216ENST00000530746 DUOX2Q9NRD8 1548 aa23.05■■□□□ 1.28
PPFIA1-216ENST00000530746 FAM50AQ14320 339 aaKnown RBP23.05■■□□□ 1.28
PPFIA1-216ENST00000530746 ZMYM3Q14202 1370 aa23.04■■□□□ 1.28
PPFIA1-216ENST00000530746 RNF17Q9BXT8 1623 aaKnown RBP23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms