RNA–Protein interactions for RNA: ENST00000530216.5

SHARPIN-204, Transcript of SHANK associated RH domain interactor, humanhuman

TSL 5

Gene SHARPIN, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHARPIN-204ENST00000530216 ARID4BQ4LE39 1312 aaPredicted RBP25.11■■□□□ 1.61
SHARPIN-204ENST00000530216 MTUS2Q5JR59 1369 aa25.1■■□□□ 1.61
SHARPIN-204ENST00000530216 MYT1LQ9UL68 1186 aa25.07■■□□□ 1.6
SHARPIN-204ENST00000530216 CDC42BPBQ9Y5S2 1711 aa25.04■■□□□ 1.6
SHARPIN-204ENST00000530216 POGZQ7Z3K3 1410 aa25.03■■□□□ 1.6
SHARPIN-204ENST00000530216 ZNF777Q9ULD5 760 aaPredicted RBP25.03■■□□□ 1.6
SHARPIN-204ENST00000530216 PREX2Q70Z35 1606 aa25.03■■□□□ 1.6
SHARPIN-204ENST00000530216 MAGI2Q86UL8 1455 aa25.02■■□□□ 1.6
SHARPIN-204ENST00000530216 ZMYM4Q5VZL5 1548 aa25.01■■□□□ 1.59
SHARPIN-204ENST00000530216 ZFYVE16Q7Z3T8 1539 aa25.01■■□□□ 1.59
SHARPIN-204ENST00000530216 CCNB3Q8WWL7 1395 aa25■■□□□ 1.59
SHARPIN-204ENST00000530216 ARHGEF40Q8TER5 1519 aa25■■□□□ 1.59
SHARPIN-204ENST00000530216 CDC42BPAQ5VT25 1732 aa25■■□□□ 1.59
SHARPIN-204ENST00000530216 ZNF518AQ6AHZ1 1483 aa24.99■■□□□ 1.59
SHARPIN-204ENST00000530216 AFAP1Q8N556 730 aa24.98■■□□□ 1.59
SHARPIN-204ENST00000530216 VPS8Q8N3P4 1428 aa24.97■■□□□ 1.59
SHARPIN-204ENST00000530216 CFDP1Q9UEE9 299 aaPredicted RBP24.97■■□□□ 1.59
SHARPIN-204ENST00000530216 EHBP1L1Q8N3D4 1523 aa24.95■■□□□ 1.58
SHARPIN-204ENST00000530216 YEATS2Q9ULM3 1422 aa24.95■■□□□ 1.58
SHARPIN-204ENST00000530216 GPATCH8Q9UKJ3 1502 aaKnown RBP24.94■■□□□ 1.58
SHARPIN-204ENST00000530216 ABCC1P33527 1531 aa24.91■■□□□ 1.58
SHARPIN-204ENST00000530216 ATP10AO60312 1499 aa24.89■■□□□ 1.58
SHARPIN-204ENST00000530216 APLP2Q06481 763 aa24.89■■□□□ 1.58
SHARPIN-204ENST00000530216 BCORL1Q5H9F3 1711 aa24.89■■□□□ 1.57
SHARPIN-204ENST00000530216 ITSN2Q9NZM3 1697 aa24.88■■□□□ 1.57
SHARPIN-204ENST00000530216 MLECQ14165 292 aa24.87■■□□□ 1.57
SHARPIN-204ENST00000530216 KDM5CP41229 1560 aa24.87■■□□□ 1.57
SHARPIN-204ENST00000530216 TIAM1Q13009 1591 aa24.87■■□□□ 1.57
SHARPIN-204ENST00000530216 TRAPPC8Q9Y2L5 1435 aa24.86■■□□□ 1.57
SHARPIN-204ENST00000530216 HECW2Q9P2P5 1572 aa24.86■■□□□ 1.57
SHARPIN-204ENST00000530216 HNRNPMP52272 730 aaKnown RBP eCLIP24.86■■□□□ 1.57
SHARPIN-204ENST00000530216 C9orf84Q5VXU9 1444 aa24.86■■□□□ 1.57
SHARPIN-204ENST00000530216 ADAMTSL3P82987 1691 aa24.85■■□□□ 1.57
SHARPIN-204ENST00000530216 PLEKHH2Q8IVE3 1493 aa24.85■■□□□ 1.57
SHARPIN-204ENST00000530216 SUPT6HQ7KZ85 1726 aaKnown RBP24.85■■□□□ 1.57
SHARPIN-204ENST00000530216 ARHGEF12Q9NZN5 1544 aa24.85■■□□□ 1.57
SHARPIN-204ENST00000530216 SAMD9LQ8IVG5 1584 aa24.84■■□□□ 1.57
SHARPIN-204ENST00000530216 MLH3Q9UHC1 1453 aa24.83■■□□□ 1.56
SHARPIN-204ENST00000530216 SYCP2Q9BX26 1530 aa24.81■■□□□ 1.56
SHARPIN-204ENST00000530216 SPAG9O60271 1321 aaKnown RBP24.81■■□□□ 1.56
SHARPIN-204ENST00000530216 KIAA1107Q9UPP5 1409 aa24.8■■□□□ 1.56
SHARPIN-204ENST00000530216 MADDQ8WXG6 1647 aa24.8■■□□□ 1.56
SHARPIN-204ENST00000530216 PTPRMP28827 1452 aa24.8■■□□□ 1.56
SHARPIN-204ENST00000530216 NCOA2Q15596 1464 aa24.8■■□□□ 1.56
SHARPIN-204ENST00000530216 LRRC9Q6ZRR7 1453 aa24.78■■□□□ 1.56
SHARPIN-204ENST00000530216 MAP3K1Q13233 1512 aa24.77■■□□□ 1.56
SHARPIN-204ENST00000530216 PLPPR3Q6T4P5 718 aa24.77■■□□□ 1.56
SHARPIN-204ENST00000530216 ZNF644Q9H582 1327 aaPredicted RBP24.76■■□□□ 1.55
SHARPIN-204ENST00000530216 DIP2CQ9Y2E4 1556 aa24.76■■□□□ 1.55
SHARPIN-204ENST00000530216 RIMS1Q86UR5 1692 aaKnown RBP24.75■■□□□ 1.55
SHARPIN-204ENST00000530216 SIGLEC1Q9BZZ2 1709 aa24.75■■□□□ 1.55
SHARPIN-204ENST00000530216 ABCA6Q8N139 1617 aa24.74■■□□□ 1.55
SHARPIN-204ENST00000530216 KANK4Q5T7N3 995 aaPredicted RBP24.73■■□□□ 1.55
SHARPIN-204ENST00000530216 KIDINS220Q9ULH0 1771 aa24.72■■□□□ 1.55
SHARPIN-204ENST00000530216 ESF1Q9H501 851 aaKnown RBP24.72■■□□□ 1.55
SHARPIN-204ENST00000530216 FER1L4A9Z1Z3 1794 aa24.7■■□□□ 1.55
SHARPIN-204ENST00000530216 REREQ9P2R6 1566 aa24.69■■□□□ 1.54
SHARPIN-204ENST00000530216 RSPH4AQ5TD94 716 aa24.68■■□□□ 1.54
SHARPIN-204ENST00000530216 ATP7AQ04656 1500 aa24.67■■□□□ 1.54
SHARPIN-204ENST00000530216 CAMSAP2Q08AD1 1489 aa24.65■■□□□ 1.54
SHARPIN-204ENST00000530216 MBD5Q9P267 1494 aa24.64■■□□□ 1.53
SHARPIN-204ENST00000530216 AGLP35573 1532 aa24.63■■□□□ 1.53
SHARPIN-204ENST00000530216 TSPY4P0CV99 314 aa24.63■■□□□ 1.53
SHARPIN-204ENST00000530216 TSPY10P0CW01 314 aa24.63■■□□□ 1.53
SHARPIN-204ENST00000530216 INO80Q9ULG1 1556 aaPredicted RBP24.62■■□□□ 1.53
SHARPIN-204ENST00000530216 CCDC141Q6ZP82 1450 aa24.6■■□□□ 1.53
SHARPIN-204ENST00000530216 A2MP01023 1474 aa24.59■■□□□ 1.53
SHARPIN-204ENST00000530216 MYOM3Q5VTT5 1437 aa24.59■■□□□ 1.53
SHARPIN-204ENST00000530216 RTEL1-TNFRSF6BF6WH68 1400 aa24.58■■□□□ 1.53
SHARPIN-204ENST00000530216 MIA2Q96PC5 1412 aa24.57■■□□□ 1.52
SHARPIN-204ENST00000530216 ADGBQ8N7X0 1667 aa24.56■■□□□ 1.52
SHARPIN-204ENST00000530216 CEBPAP49715 358 aaPredicted RBP24.56■■□□□ 1.52
SHARPIN-204ENST00000530216 GGT6Q6P531 493 aa24.54■■□□□ 1.52
SHARPIN-204ENST00000530216 ARHGEF5Q12774 1597 aa24.53■■□□□ 1.52
SHARPIN-204ENST00000530216 CNTLNQ9NXG0 1405 aa24.51■■□□□ 1.51
SHARPIN-204ENST00000530216 DHX29Q7Z478 1369 aaKnown RBP24.49■■□□□ 1.51
SHARPIN-204ENST00000530216 PLXNC1O60486 1568 aa24.49■■□□□ 1.51
SHARPIN-204ENST00000530216 LMTK3Q96Q04 1460 aa24.46■■□□□ 1.51
SHARPIN-204ENST00000530216 KIF3BO15066 747 aa24.46■■□□□ 1.51
SHARPIN-204ENST00000530216 PPP6R1Q9UPN7 881 aa24.45■■□□□ 1.5
SHARPIN-204ENST00000530216 C3P01024 1663 aa24.44■■□□□ 1.5
SHARPIN-204ENST00000530216 PTPN23Q9H3S7 1636 aa24.43■■□□□ 1.5
SHARPIN-204ENST00000530216 HSPA2P54652 639 aa24.43■■□□□ 1.5
SHARPIN-204ENST00000530216 SETD1BQ9UPS6 1966 aaKnown RBP24.43■■□□□ 1.5
SHARPIN-204ENST00000530216 PREX1Q8TCU6 1659 aa24.41■■□□□ 1.5
SHARPIN-204ENST00000530216 FGD6Q6ZV73 1430 aa24.41■■□□□ 1.5
SHARPIN-204ENST00000530216 ZMYM3Q14202 1370 aa24.41■■□□□ 1.5
SHARPIN-204ENST00000530216 CLTCQ00610 1675 aaKnown RBP24.4■■□□□ 1.5
SHARPIN-204ENST00000530216 UHRF1BP1Q6BDS2 1440 aa24.39■■□□□ 1.5
SHARPIN-204ENST00000530216 MROH2AA6NES4 1674 aa24.39■■□□□ 1.49
SHARPIN-204ENST00000530216 MAST1Q9Y2H9 1570 aa24.38■■□□□ 1.49
SHARPIN-204ENST00000530216 FAM50AQ14320 339 aaKnown RBP24.37■■□□□ 1.49
SHARPIN-204ENST00000530216 WASHC2CQ9Y4E1 1318 aa24.35■■□□□ 1.49
SHARPIN-204ENST00000530216 TCOF1Q13428 1488 aaKnown RBP24.32■■□□□ 1.48
SHARPIN-204ENST00000530216 RRP7BPQ9NSQ0 103 aa24.32■■□□□ 1.48
SHARPIN-204ENST00000530216 ABCC5O15440 1437 aa24.32■■□□□ 1.48
SHARPIN-204ENST00000530216 DAPK1P53355 1430 aa24.31■■□□□ 1.48
SHARPIN-204ENST00000530216 NPATQ14207 1427 aa24.31■■□□□ 1.48
SHARPIN-204ENST00000530216 CHIC2Q9UKJ5 165 aa24.3■■□□□ 1.48
SHARPIN-204ENST00000530216 SHANK2Q9UPX8 1470 aa24.3■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms