RNA–Protein interactions for RNA: ENST00000529795.1

PACS1-210, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

TSL 2

Gene PACS1, Length 448 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-210ENST00000529795 MTUS2Q5JR59 1369 aa20.23■□□□□ 0.83
PACS1-210ENST00000529795 FRMPD1Q5SYB0 1578 aa20.23■□□□□ 0.83
PACS1-210ENST00000529795 CDC42BPBQ9Y5S2 1711 aa20.21■□□□□ 0.83
PACS1-210ENST00000529795 ZMYM4Q5VZL5 1548 aa20.21■□□□□ 0.83
PACS1-210ENST00000529795 PREX2Q70Z35 1606 aa20.2■□□□□ 0.82
PACS1-210ENST00000529795 POGZQ7Z3K3 1410 aa20.19■□□□□ 0.82
PACS1-210ENST00000529795 ARID4BQ4LE39 1312 aaPredicted RBP20.18■□□□□ 0.82
PACS1-210ENST00000529795 ZNF518AQ6AHZ1 1483 aa20.18■□□□□ 0.82
PACS1-210ENST00000529795 ARHGEF40Q8TER5 1519 aa20.17■□□□□ 0.82
PACS1-210ENST00000529795 CDC42BPAQ5VT25 1732 aa20.17■□□□□ 0.82
PACS1-210ENST00000529795 ZFYVE16Q7Z3T8 1539 aa20.17■□□□□ 0.82
PACS1-210ENST00000529795 EHBP1L1Q8N3D4 1523 aa20.14■□□□□ 0.81
PACS1-210ENST00000529795 VPS8Q8N3P4 1428 aa20.14■□□□□ 0.81
PACS1-210ENST00000529795 CCNB3Q8WWL7 1395 aa20.14■□□□□ 0.81
PACS1-210ENST00000529795 MYT1LQ9UL68 1186 aa20.13■□□□□ 0.81
PACS1-210ENST00000529795 CFDP1Q9UEE9 299 aaPredicted RBP20.12■□□□□ 0.81
PACS1-210ENST00000529795 PLEKHH2Q8IVE3 1493 aa20.11■□□□□ 0.81
PACS1-210ENST00000529795 GPATCH8Q9UKJ3 1502 aaKnown RBP20.1■□□□□ 0.81
PACS1-210ENST00000529795 ZNF777Q9ULD5 760 aaPredicted RBP20.09■□□□□ 0.81
PACS1-210ENST00000529795 BCORL1Q5H9F3 1711 aa20.09■□□□□ 0.81
PACS1-210ENST00000529795 ATP10AO60312 1499 aa20.09■□□□□ 0.81
PACS1-210ENST00000529795 ITSN2Q9NZM3 1697 aa20.09■□□□□ 0.81
PACS1-210ENST00000529795 KDM5CP41229 1560 aa20.08■□□□□ 0.81
PACS1-210ENST00000529795 ABCC1P33527 1531 aa20.08■□□□□ 0.81
PACS1-210ENST00000529795 AFAP1Q8N556 730 aa20.08■□□□□ 0.81
PACS1-210ENST00000529795 SUPT6HQ7KZ85 1726 aaKnown RBP20.07■□□□□ 0.8
PACS1-210ENST00000529795 APLP2Q06481 763 aa20.07■□□□□ 0.8
PACS1-210ENST00000529795 ADAMTSL3P82987 1691 aa20.07■□□□□ 0.8
PACS1-210ENST00000529795 TIAM1Q13009 1591 aa20.06■□□□□ 0.8
PACS1-210ENST00000529795 HECW2Q9P2P5 1572 aa20.06■□□□□ 0.8
PACS1-210ENST00000529795 YEATS2Q9ULM3 1422 aa20.06■□□□□ 0.8
PACS1-210ENST00000529795 MAP3K1Q13233 1512 aa20.06■□□□□ 0.8
PACS1-210ENST00000529795 MLH3Q9UHC1 1453 aa20.05■□□□□ 0.8
PACS1-210ENST00000529795 C9orf84Q5VXU9 1444 aa20.05■□□□□ 0.8
PACS1-210ENST00000529795 KIAA1107Q9UPP5 1409 aa20.05■□□□□ 0.8
PACS1-210ENST00000529795 SAMD9LQ8IVG5 1584 aa20.02■□□□□ 0.8
PACS1-210ENST00000529795 TRAPPC8Q9Y2L5 1435 aa20.01■□□□□ 0.79
PACS1-210ENST00000529795 ARHGEF12Q9NZN5 1544 aa20■□□□□ 0.79
PACS1-210ENST00000529795 HNRNPMP52272 730 aaKnown RBP eCLIP19.99■□□□□ 0.79
PACS1-210ENST00000529795 RSPH4AQ5TD94 716 aa19.99■□□□□ 0.79
PACS1-210ENST00000529795 REREQ9P2R6 1566 aa19.99■□□□□ 0.79
PACS1-210ENST00000529795 SPAG9O60271 1321 aaKnown RBP19.99■□□□□ 0.79
PACS1-210ENST00000529795 PTPRMP28827 1452 aa19.99■□□□□ 0.79
PACS1-210ENST00000529795 NCOA2Q15596 1464 aa19.99■□□□□ 0.79
PACS1-210ENST00000529795 LRRC9Q6ZRR7 1453 aa19.99■□□□□ 0.79
PACS1-210ENST00000529795 SYCP2Q9BX26 1530 aa19.98■□□□□ 0.79
PACS1-210ENST00000529795 MADDQ8WXG6 1647 aa19.97■□□□□ 0.79
PACS1-210ENST00000529795 DIP2CQ9Y2E4 1556 aa19.95■□□□□ 0.78
PACS1-210ENST00000529795 KIDINS220Q9ULH0 1771 aa19.95■□□□□ 0.78
PACS1-210ENST00000529795 MLECQ14165 292 aa19.94■□□□□ 0.78
PACS1-210ENST00000529795 RIMS1Q86UR5 1692 aaKnown RBP19.94■□□□□ 0.78
PACS1-210ENST00000529795 FER1L4A9Z1Z3 1794 aa19.93■□□□□ 0.78
PACS1-210ENST00000529795 ABCA6Q8N139 1617 aa19.93■□□□□ 0.78
PACS1-210ENST00000529795 ESF1Q9H501 851 aaKnown RBP19.92■□□□□ 0.78
PACS1-210ENST00000529795 AGLP35573 1532 aa19.92■□□□□ 0.78
PACS1-210ENST00000529795 SIGLEC1Q9BZZ2 1709 aa19.9■□□□□ 0.78
PACS1-210ENST00000529795 ATP7AQ04656 1500 aa19.9■□□□□ 0.78
PACS1-210ENST00000529795 RTEL1-TNFRSF6BF6WH68 1400 aa19.88■□□□□ 0.77
PACS1-210ENST00000529795 ZNF644Q9H582 1327 aaPredicted RBP19.88■□□□□ 0.77
PACS1-210ENST00000529795 TSPY4P0CV99 314 aa19.87■□□□□ 0.77
PACS1-210ENST00000529795 TSPY10P0CW01 314 aa19.87■□□□□ 0.77
PACS1-210ENST00000529795 INO80Q9ULG1 1556 aaPredicted RBP19.87■□□□□ 0.77
PACS1-210ENST00000529795 CAMSAP2Q08AD1 1489 aa19.86■□□□□ 0.77
PACS1-210ENST00000529795 MBD5Q9P267 1494 aa19.86■□□□□ 0.77
PACS1-210ENST00000529795 MIA2Q96PC5 1412 aa19.86■□□□□ 0.77
PACS1-210ENST00000529795 KANK4Q5T7N3 995 aaPredicted RBP19.86■□□□□ 0.77
PACS1-210ENST00000529795 ADGBQ8N7X0 1667 aa19.85■□□□□ 0.77
PACS1-210ENST00000529795 CCDC141Q6ZP82 1450 aa19.85■□□□□ 0.77
PACS1-210ENST00000529795 SETD1BQ9UPS6 1966 aaKnown RBP19.84■□□□□ 0.77
PACS1-210ENST00000529795 MYOM3Q5VTT5 1437 aa19.84■□□□□ 0.77
PACS1-210ENST00000529795 ARHGEF5Q12774 1597 aa19.83■□□□□ 0.76
PACS1-210ENST00000529795 A2MP01023 1474 aa19.82■□□□□ 0.76
PACS1-210ENST00000529795 CNTLNQ9NXG0 1405 aa19.82■□□□□ 0.76
PACS1-210ENST00000529795 PPP6R1Q9UPN7 881 aa19.81■□□□□ 0.76
PACS1-210ENST00000529795 PLPPR3Q6T4P5 718 aa19.78■□□□□ 0.76
PACS1-210ENST00000529795 PLXNC1O60486 1568 aa19.77■□□□□ 0.76
PACS1-210ENST00000529795 DHX29Q7Z478 1369 aaKnown RBP19.76■□□□□ 0.75
PACS1-210ENST00000529795 MROH2AA6NES4 1674 aa19.74■□□□□ 0.75
PACS1-210ENST00000529795 GGT6Q6P531 493 aa19.73■□□□□ 0.75
PACS1-210ENST00000529795 PREX1Q8TCU6 1659 aa19.72■□□□□ 0.75
PACS1-210ENST00000529795 MAST1Q9Y2H9 1570 aa19.71■□□□□ 0.75
PACS1-210ENST00000529795 CEBPAP49715 358 aaPredicted RBP19.71■□□□□ 0.75
PACS1-210ENST00000529795 LMTK3Q96Q04 1460 aa19.71■□□□□ 0.75
PACS1-210ENST00000529795 C3P01024 1663 aa19.71■□□□□ 0.75
PACS1-210ENST00000529795 PTPN23Q9H3S7 1636 aa19.7■□□□□ 0.74
PACS1-210ENST00000529795 KIF3BO15066 747 aa19.68■□□□□ 0.74
PACS1-210ENST00000529795 UHRF1BP1Q6BDS2 1440 aa19.68■□□□□ 0.74
PACS1-210ENST00000529795 FGD6Q6ZV73 1430 aa19.68■□□□□ 0.74
PACS1-210ENST00000529795 FAM135AQ9P2D6 1515 aa19.67■□□□□ 0.74
PACS1-210ENST00000529795 ZMYM3Q14202 1370 aa19.67■□□□□ 0.74
PACS1-210ENST00000529795 NPATQ14207 1427 aa19.65■□□□□ 0.74
PACS1-210ENST00000529795 TCOF1Q13428 1488 aaKnown RBP19.65■□□□□ 0.74
PACS1-210ENST00000529795 CLTCQ00610 1675 aaKnown RBP19.65■□□□□ 0.74
PACS1-210ENST00000529795 SHANK2Q9UPX8 1470 aa19.64■□□□□ 0.73
PACS1-210ENST00000529795 DMRT2Q9Y5R5 561 aa19.61■□□□□ 0.73
PACS1-210ENST00000529795 CROCC2H7BZ55 1655 aa19.61■□□□□ 0.73
PACS1-210ENST00000529795 DNMT1P26358 1616 aaKnown RBP19.61■□□□□ 0.73
PACS1-210ENST00000529795 EIF2AK4Q9P2K8 1649 aaKnown RBP19.61■□□□□ 0.73
PACS1-210ENST00000529795 DUOX2Q9NRD8 1548 aa19.61■□□□□ 0.73
PACS1-210ENST00000529795 WASHC2CQ9Y4E1 1318 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms