RNA–Protein interactions for RNA: ENST00000529764.1

LTBP3-215, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 5

Gene LTBP3, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-215ENST00000529764 RAPGEF3O95398 923 aa10.53□□□□□ -0.72
LTBP3-215ENST00000529764 ARID4BQ4LE39 1312 aaPredicted RBP10.53□□□□□ -0.72
LTBP3-215ENST00000529764 PCF11O94913 1555 aaKnown RBP10.52□□□□□ -0.72
LTBP3-215ENST00000529764 MYT1LQ9UL68 1186 aa10.52□□□□□ -0.73
LTBP3-215ENST00000529764 ARHGAP5Q13017 1502 aa10.51□□□□□ -0.73
LTBP3-215ENST00000529764 POGZQ7Z3K3 1410 aa10.5□□□□□ -0.73
LTBP3-215ENST00000529764 MAGI2Q86UL8 1455 aa10.49□□□□□ -0.73
LTBP3-215ENST00000529764 MTUS2Q5JR59 1369 aa10.49□□□□□ -0.73
LTBP3-215ENST00000529764 CEP162Q5TB80 1403 aa10.49□□□□□ -0.73
LTBP3-215ENST00000529764 SCAPERQ9BY12 1400 aa10.49□□□□□ -0.73
LTBP3-215ENST00000529764 RICTORQ6R327 1708 aa10.48□□□□□ -0.73
LTBP3-215ENST00000529764 LRRIQ1Q96JM4 1722 aa10.48□□□□□ -0.73
LTBP3-215ENST00000529764 ZNF518AQ6AHZ1 1483 aa10.46□□□□□ -0.74
LTBP3-215ENST00000529764 ZMYM4Q5VZL5 1548 aa10.46□□□□□ -0.74
LTBP3-215ENST00000529764 ZFYVE16Q7Z3T8 1539 aa10.46□□□□□ -0.74
LTBP3-215ENST00000529764 ARHGEF40Q8TER5 1519 aa10.46□□□□□ -0.74
LTBP3-215ENST00000529764 FRMPD1Q5SYB0 1578 aa10.45□□□□□ -0.74
LTBP3-215ENST00000529764 PREX2Q70Z35 1606 aa10.44□□□□□ -0.74
LTBP3-215ENST00000529764 APLP2Q06481 763 aa10.44□□□□□ -0.74
LTBP3-215ENST00000529764 CCNB3Q8WWL7 1395 aa10.43□□□□□ -0.74
LTBP3-215ENST00000529764 ZNF777Q9ULD5 760 aaPredicted RBP10.43□□□□□ -0.74
LTBP3-215ENST00000529764 CDC42BPBQ9Y5S2 1711 aa10.43□□□□□ -0.74
LTBP3-215ENST00000529764 ESF1Q9H501 851 aaKnown RBP10.42□□□□□ -0.74
LTBP3-215ENST00000529764 CFDP1Q9UEE9 299 aaPredicted RBP10.42□□□□□ -0.74
LTBP3-215ENST00000529764 EHBP1L1Q8N3D4 1523 aa10.42□□□□□ -0.74
LTBP3-215ENST00000529764 PLEKHH2Q8IVE3 1493 aa10.42□□□□□ -0.74
LTBP3-215ENST00000529764 BCORL1Q5H9F3 1711 aa10.41□□□□□ -0.74
LTBP3-215ENST00000529764 CDC42BPAQ5VT25 1732 aa10.41□□□□□ -0.74
LTBP3-215ENST00000529764 ATP10AO60312 1499 aa10.41□□□□□ -0.74
LTBP3-215ENST00000529764 C9orf84Q5VXU9 1444 aa10.41□□□□□ -0.74
LTBP3-215ENST00000529764 ITSN2Q9NZM3 1697 aa10.41□□□□□ -0.74
LTBP3-215ENST00000529764 HECW2Q9P2P5 1572 aa10.4□□□□□ -0.74
LTBP3-215ENST00000529764 LOC105371045A0A1W2PR82 267 aa10.4□□□□□ -0.74
LTBP3-215ENST00000529764 ADAMTSL3P82987 1691 aa10.39□□□□□ -0.75
LTBP3-215ENST00000529764 AFAP1Q8N556 730 aa10.39□□□□□ -0.75
LTBP3-215ENST00000529764 SUPT6HQ7KZ85 1726 aaKnown RBP10.38□□□□□ -0.75
LTBP3-215ENST00000529764 ABCC1P33527 1531 aa10.38□□□□□ -0.75
LTBP3-215ENST00000529764 MLECQ14165 292 aa10.38□□□□□ -0.75
LTBP3-215ENST00000529764 VPS8Q8N3P4 1428 aa10.38□□□□□ -0.75
LTBP3-215ENST00000529764 YEATS2Q9ULM3 1422 aa10.38□□□□□ -0.75
LTBP3-215ENST00000529764 KDM5CP41229 1560 aa10.38□□□□□ -0.75
LTBP3-215ENST00000529764 PTPRMP28827 1452 aa10.37□□□□□ -0.75
LTBP3-215ENST00000529764 MLH3Q9UHC1 1453 aa10.37□□□□□ -0.75
LTBP3-215ENST00000529764 GPATCH8Q9UKJ3 1502 aaKnown RBP10.37□□□□□ -0.75
LTBP3-215ENST00000529764 MADDQ8WXG6 1647 aa10.36□□□□□ -0.75
LTBP3-215ENST00000529764 SPAG9O60271 1321 aaKnown RBP10.36□□□□□ -0.75
LTBP3-215ENST00000529764 KIAA1107Q9UPP5 1409 aa10.36□□□□□ -0.75
LTBP3-215ENST00000529764 RIMS1Q86UR5 1692 aaKnown RBP10.35□□□□□ -0.75
LTBP3-215ENST00000529764 FER1L4A9Z1Z3 1794 aa10.35□□□□□ -0.75
LTBP3-215ENST00000529764 RSPH4AQ5TD94 716 aa10.35□□□□□ -0.75
LTBP3-215ENST00000529764 TIAM1Q13009 1591 aa10.35□□□□□ -0.75
LTBP3-215ENST00000529764 SYCP2Q9BX26 1530 aa10.34□□□□□ -0.75
LTBP3-215ENST00000529764 HNRNPMP52272 730 aaKnown RBP eCLIP10.34□□□□□ -0.75
LTBP3-215ENST00000529764 SAMD9LQ8IVG5 1584 aa10.34□□□□□ -0.75
LTBP3-215ENST00000529764 TRAPPC8Q9Y2L5 1435 aa10.33□□□□□ -0.76
LTBP3-215ENST00000529764 REREQ9P2R6 1566 aa10.33□□□□□ -0.76
LTBP3-215ENST00000529764 MAP3K1Q13233 1512 aa10.33□□□□□ -0.76
LTBP3-215ENST00000529764 DIP2CQ9Y2E4 1556 aa10.32□□□□□ -0.76
LTBP3-215ENST00000529764 NCOA2Q15596 1464 aa10.31□□□□□ -0.76
LTBP3-215ENST00000529764 TSPY4P0CV99 314 aa10.31□□□□□ -0.76
LTBP3-215ENST00000529764 TSPY10P0CW01 314 aa10.31□□□□□ -0.76
LTBP3-215ENST00000529764 ARHGEF12Q9NZN5 1544 aa10.31□□□□□ -0.76
LTBP3-215ENST00000529764 LRRC9Q6ZRR7 1453 aa10.3□□□□□ -0.76
LTBP3-215ENST00000529764 ABCA6Q8N139 1617 aa10.3□□□□□ -0.76
LTBP3-215ENST00000529764 KIDINS220Q9ULH0 1771 aa10.3□□□□□ -0.76
LTBP3-215ENST00000529764 AGLP35573 1532 aa10.3□□□□□ -0.76
LTBP3-215ENST00000529764 ATP7AQ04656 1500 aa10.3□□□□□ -0.76
LTBP3-215ENST00000529764 CNTLNQ9NXG0 1405 aa10.29□□□□□ -0.76
LTBP3-215ENST00000529764 ADGBQ8N7X0 1667 aa10.28□□□□□ -0.76
LTBP3-215ENST00000529764 RTEL1-TNFRSF6BF6WH68 1400 aa10.28□□□□□ -0.76
LTBP3-215ENST00000529764 CCDC141Q6ZP82 1450 aa10.28□□□□□ -0.76
LTBP3-215ENST00000529764 A2MP01023 1474 aa10.27□□□□□ -0.77
LTBP3-215ENST00000529764 INO80Q9ULG1 1556 aaPredicted RBP10.26□□□□□ -0.77
LTBP3-215ENST00000529764 SETD1BQ9UPS6 1966 aaKnown RBP10.26□□□□□ -0.77
LTBP3-215ENST00000529764 CAMSAP2Q08AD1 1489 aa10.26□□□□□ -0.77
LTBP3-215ENST00000529764 SIGLEC1Q9BZZ2 1709 aa10.26□□□□□ -0.77
LTBP3-215ENST00000529764 MIA2Q96PC5 1412 aa10.25□□□□□ -0.77
LTBP3-215ENST00000529764 ZNF644Q9H582 1327 aaPredicted RBP10.25□□□□□ -0.77
LTBP3-215ENST00000529764 PREX1Q8TCU6 1659 aa10.25□□□□□ -0.77
LTBP3-215ENST00000529764 UHRF1BP1Q6BDS2 1440 aa10.24□□□□□ -0.77
LTBP3-215ENST00000529764 GGT6Q6P531 493 aa10.24□□□□□ -0.77
LTBP3-215ENST00000529764 MYOM3Q5VTT5 1437 aa10.24□□□□□ -0.77
LTBP3-215ENST00000529764 MBD5Q9P267 1494 aa10.23□□□□□ -0.77
LTBP3-215ENST00000529764 ARHGEF5Q12774 1597 aa10.23□□□□□ -0.77
LTBP3-215ENST00000529764 DMRT2Q9Y5R5 561 aa10.23□□□□□ -0.77
LTBP3-215ENST00000529764 MROH2AA6NES4 1674 aa10.22□□□□□ -0.77
LTBP3-215ENST00000529764 KANK4Q5T7N3 995 aaPredicted RBP10.22□□□□□ -0.77
LTBP3-215ENST00000529764 DHX29Q7Z478 1369 aaKnown RBP10.22□□□□□ -0.77
LTBP3-215ENST00000529764 LMTK3Q96Q04 1460 aa10.22□□□□□ -0.77
LTBP3-215ENST00000529764 KIF3BO15066 747 aa10.21□□□□□ -0.77
LTBP3-215ENST00000529764 CEBPAP49715 358 aaPredicted RBP10.21□□□□□ -0.77
LTBP3-215ENST00000529764 PLXNC1O60486 1568 aa10.21□□□□□ -0.78
LTBP3-215ENST00000529764 C3P01024 1663 aa10.21□□□□□ -0.78
LTBP3-215ENST00000529764 FAM135AQ9P2D6 1515 aa10.19□□□□□ -0.78
LTBP3-215ENST00000529764 NPATQ14207 1427 aa10.19□□□□□ -0.78
LTBP3-215ENST00000529764 ZMYM3Q14202 1370 aa10.19□□□□□ -0.78
LTBP3-215ENST00000529764 CLTCQ00610 1675 aaKnown RBP10.18□□□□□ -0.78
LTBP3-215ENST00000529764 WASHC2CQ9Y4E1 1318 aa10.18□□□□□ -0.78
LTBP3-215ENST00000529764 HSPA2P54652 639 aa10.18□□□□□ -0.78
LTBP3-215ENST00000529764 PTPN23Q9H3S7 1636 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms