RNA–Protein interactions for RNA: ENST00000529540.5

NR1H3-231, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2

Gene NR1H3, Length 1,673 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-231ENST00000529540 CFDP1Q9UEE9 299 aaPredicted RBP21.9■■□□□ 1.1
NR1H3-231ENST00000529540 CDC42BPAQ5VT25 1732 aa21.9■■□□□ 1.1
NR1H3-231ENST00000529540 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.89■■□□□ 1.09
NR1H3-231ENST00000529540 CD109Q6YHK3 1445 aa21.87■■□□□ 1.09
NR1H3-231ENST00000529540 ARHGAP5Q13017 1502 aa21.86■■□□□ 1.09
NR1H3-231ENST00000529540 FAM69CQ0P6D2 419 aa21.85■■□□□ 1.09
NR1H3-231ENST00000529540 MAP3K4Q9Y6R4 1608 aa21.85■■□□□ 1.09
NR1H3-231ENST00000529540 TCOF1Q13428 1488 aaKnown RBP21.85■■□□□ 1.09
NR1H3-231ENST00000529540 PTPN23Q9H3S7 1636 aa21.84■■□□□ 1.09
NR1H3-231ENST00000529540 EFCAB2Q5VUJ9 269 aa21.84■■□□□ 1.09
NR1H3-231ENST00000529540 CFAP74Q9C0B2 1584 aa21.83■■□□□ 1.09
NR1H3-231ENST00000529540 CDC42BPBQ9Y5S2 1711 aa21.83■■□□□ 1.09
NR1H3-231ENST00000529540 PLEKHH2Q8IVE3 1493 aa21.83■■□□□ 1.08
NR1H3-231ENST00000529540 SCAF1Q9H7N4 1312 aaKnown RBP21.8■■□□□ 1.08
NR1H3-231ENST00000529540 FANCAO15360 1455 aa21.79■■□□□ 1.08
NR1H3-231ENST00000529540 CAMSAP2Q08AD1 1489 aa21.79■■□□□ 1.08
NR1H3-231ENST00000529540 TEX14Q8IWB6 1497 aa21.79■■□□□ 1.08
NR1H3-231ENST00000529540 KIF13AQ9H1H9 1805 aa21.78■■□□□ 1.08
NR1H3-231ENST00000529540 FAM50AQ14320 339 aaKnown RBP21.78■■□□□ 1.08
NR1H3-231ENST00000529540 KIAA1107Q9UPP5 1409 aa21.77■■□□□ 1.08
NR1H3-231ENST00000529540 NEO1Q92859 1461 aa21.77■■□□□ 1.07
NR1H3-231ENST00000529540 RSPH4AQ5TD94 716 aa21.75■■□□□ 1.07
NR1H3-231ENST00000529540 ZNF777Q9ULD5 760 aaPredicted RBP21.75■■□□□ 1.07
NR1H3-231ENST00000529540 SAMD9LQ8IVG5 1584 aa21.74■■□□□ 1.07
NR1H3-231ENST00000529540 ABCC1P33527 1531 aa21.71■■□□□ 1.07
NR1H3-231ENST00000529540 AKNAQ7Z591 1439 aa21.71■■□□□ 1.07
NR1H3-231ENST00000529540 ARHGEF5Q12774 1597 aa21.7■■□□□ 1.06
NR1H3-231ENST00000529540 TRHP20396 242 aaPredicted RBP21.69■■□□□ 1.06
NR1H3-231ENST00000529540 ADGRL1O94910 1474 aa21.69■■□□□ 1.06
NR1H3-231ENST00000529540 ZNF644Q9H582 1327 aaPredicted RBP21.69■■□□□ 1.06
NR1H3-231ENST00000529540 DNMT1P26358 1616 aaKnown RBP21.69■■□□□ 1.06
NR1H3-231ENST00000529540 SYCP2Q9BX26 1530 aa21.67■■□□□ 1.06
NR1H3-231ENST00000529540 CCDC141Q6ZP82 1450 aa21.66■■□□□ 1.06
NR1H3-231ENST00000529540 MBD5Q9P267 1494 aa21.66■■□□□ 1.06
NR1H3-231ENST00000529540 DAPK1P53355 1430 aa21.66■■□□□ 1.06
NR1H3-231ENST00000529540 PPRC1Q5VV67 1664 aaKnown RBP21.65■■□□□ 1.06
NR1H3-231ENST00000529540 CCER1Q8TC90 406 aaPredicted RBP21.65■■□□□ 1.06
NR1H3-231ENST00000529540 SHANK2Q9UPX8 1470 aa21.64■■□□□ 1.05
NR1H3-231ENST00000529540 SCAPERQ9BY12 1400 aa21.64■■□□□ 1.05
NR1H3-231ENST00000529540 TSPOAP1O95153 1857 aa21.63■■□□□ 1.05
NR1H3-231ENST00000529540 TSPY4P0CV99 314 aa21.63■■□□□ 1.05
NR1H3-231ENST00000529540 TSPY10P0CW01 314 aa21.63■■□□□ 1.05
NR1H3-231ENST00000529540 HNRNPMP52272 730 aaKnown RBP eCLIP21.62■■□□□ 1.05
NR1H3-231ENST00000529540 ABCC5O15440 1437 aa21.62■■□□□ 1.05
NR1H3-231ENST00000529540 ZNF518AQ6AHZ1 1483 aa21.61■■□□□ 1.05
NR1H3-231ENST00000529540 CROCC2H7BZ55 1655 aa21.61■■□□□ 1.05
NR1H3-231ENST00000529540 DENND4BO75064 1496 aaPredicted RBP21.59■■□□□ 1.05
NR1H3-231ENST00000529540 ARHGEF12Q9NZN5 1544 aa21.59■■□□□ 1.05
NR1H3-231ENST00000529540 ITGAEP38570 1179 aa21.59■■□□□ 1.05
NR1H3-231ENST00000529540 POGZQ7Z3K3 1410 aa21.58■■□□□ 1.05
NR1H3-231ENST00000529540 ROCK1Q13464 1354 aa21.58■■□□□ 1.04
NR1H3-231ENST00000529540 MAST1Q9Y2H9 1570 aa21.57■■□□□ 1.04
NR1H3-231ENST00000529540 ACIN1Q9UKV3 1341 aaKnown RBP21.56■■□□□ 1.04
NR1H3-231ENST00000529540 C9orf84Q5VXU9 1444 aa21.56■■□□□ 1.04
NR1H3-231ENST00000529540 TRAPPC8Q9Y2L5 1435 aa21.56■■□□□ 1.04
NR1H3-231ENST00000529540 RTEL1-TNFRSF6BF6WH68 1400 aa21.55■■□□□ 1.04
NR1H3-231ENST00000529540 ADGRL2O95490 1459 aa21.55■■□□□ 1.04
NR1H3-231ENST00000529540 ADGBQ8N7X0 1667 aa21.54■■□□□ 1.04
NR1H3-231ENST00000529540 KDM5CP41229 1560 aa21.54■■□□□ 1.04
NR1H3-231ENST00000529540 ANKRD30AQ9BXX3 1397 aa21.54■■□□□ 1.04
NR1H3-231ENST00000529540 PTPRKQ15262 1439 aa21.53■■□□□ 1.04
NR1H3-231ENST00000529540 SPAG9O60271 1321 aaKnown RBP21.52■■□□□ 1.04
NR1H3-231ENST00000529540 AFAP1Q8N556 730 aa21.5■■□□□ 1.03
NR1H3-231ENST00000529540 HFM1A2PYH4 1435 aa21.49■■□□□ 1.03
NR1H3-231ENST00000529540 RICTORQ6R327 1708 aa21.49■■□□□ 1.03
NR1H3-231ENST00000529540 MLH3Q9UHC1 1453 aa21.49■■□□□ 1.03
NR1H3-231ENST00000529540 NCOA1Q15788 1441 aa21.49■■□□□ 1.03
NR1H3-231ENST00000529540 PLXNC1O60486 1568 aa21.49■■□□□ 1.03
NR1H3-231ENST00000529540 ZMYM4Q5VZL5 1548 aa21.48■■□□□ 1.03
NR1H3-231ENST00000529540 ZFYVE16Q7Z3T8 1539 aa21.48■■□□□ 1.03
NR1H3-231ENST00000529540 MAGI2Q86UL8 1455 aa21.48■■□□□ 1.03
NR1H3-231ENST00000529540 HECW2Q9P2P5 1572 aa21.47■■□□□ 1.03
NR1H3-231ENST00000529540 INO80Q9ULG1 1556 aaPredicted RBP21.47■■□□□ 1.03
NR1H3-231ENST00000529540 CHIC2Q9UKJ5 165 aa21.47■■□□□ 1.03
NR1H3-231ENST00000529540 ATP7AQ04656 1500 aa21.47■■□□□ 1.03
NR1H3-231ENST00000529540 DIEXFQ68CQ4 756 aaKnown RBP21.45■■□□□ 1.02
NR1H3-231ENST00000529540 RAPGEF3O95398 923 aa21.44■■□□□ 1.02
NR1H3-231ENST00000529540 GCC2Q8IWJ2 1684 aa21.44■■□□□ 1.02
NR1H3-231ENST00000529540 FRMPD1Q5SYB0 1578 aa21.44■■□□□ 1.02
NR1H3-231ENST00000529540 MYT1LQ9UL68 1186 aa21.44■■□□□ 1.02
NR1H3-231ENST00000529540 SETD5Q9C0A6 1442 aa21.43■■□□□ 1.02
NR1H3-231ENST00000529540 KIF15Q9NS87 1388 aa21.43■■□□□ 1.02
NR1H3-231ENST00000529540 NAIPQ13075 1403 aa21.43■■□□□ 1.02
NR1H3-231ENST00000529540 KDM6BO15054 1643 aa21.42■■□□□ 1.02
NR1H3-231ENST00000529540 NEUROD1Q13562 356 aa21.41■■□□□ 1.02
NR1H3-231ENST00000529540 DUOX2Q9NRD8 1548 aa21.41■■□□□ 1.02
NR1H3-231ENST00000529540 CENPBP07199 599 aaPredicted RBP21.4■■□□□ 1.02
NR1H3-231ENST00000529540 RRP7BPQ9NSQ0 103 aa21.4■■□□□ 1.02
NR1H3-231ENST00000529540 KIDINS220Q9ULH0 1771 aa21.4■■□□□ 1.02
NR1H3-231ENST00000529540 COL17A1Q9UMD9 1497 aaPredicted RBP21.39■■□□□ 1.01
NR1H3-231ENST00000529540 ERBINQ96RT1 1412 aa21.37■■□□□ 1.01
NR1H3-231ENST00000529540 ANKRD50Q9ULJ7 1429 aa21.37■■□□□ 1.01
NR1H3-231ENST00000529540 RAB3GAP2Q9H2M9 1393 aa21.34■■□□□ 1.01
NR1H3-231ENST00000529540 DHX29Q7Z478 1369 aaKnown RBP21.33■■□□□ 1.01
NR1H3-231ENST00000529540 ABCA6Q8N139 1617 aa21.32■■□□□ 1
NR1H3-231ENST00000529540 DIP2CQ9Y2E4 1556 aa21.32■■□□□ 1
NR1H3-231ENST00000529540 A2MP01023 1474 aa21.32■■□□□ 1
NR1H3-231ENST00000529540 ARHGEF40Q8TER5 1519 aa21.31■■□□□ 1
NR1H3-231ENST00000529540 EIF2AK4Q9P2K8 1649 aaKnown RBP21.31■■□□□ 1
NR1H3-231ENST00000529540 REREQ9P2R6 1566 aa21.31■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms