RNA–Protein interactions for RNA: ENST00000529529.1

TRIM3-209, Transcript of tripartite motif containing 3, humanhuman

TSL 4

Gene TRIM3, Length 785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-209ENST00000529529 MAGI2Q86UL8 1455 aa26.18■■□□□ 1.78
TRIM3-209ENST00000529529 POGZQ7Z3K3 1410 aa26.18■■□□□ 1.78
TRIM3-209ENST00000529529 CCDC18Q5T9S5 1454 aa26.17■■□□□ 1.78
TRIM3-209ENST00000529529 MYO5CQ9NQX4 1742 aa26.17■■□□□ 1.78
TRIM3-209ENST00000529529 PCF11O94913 1555 aaKnown RBP26.17■■□□□ 1.78
TRIM3-209ENST00000529529 ZFYVE16Q7Z3T8 1539 aa26.17■■□□□ 1.78
TRIM3-209ENST00000529529 BCORL1Q5H9F3 1711 aa26.17■■□□□ 1.78
TRIM3-209ENST00000529529 ARHGAP5Q13017 1502 aa26.15■■□□□ 1.78
TRIM3-209ENST00000529529 AFAP1Q8N556 730 aa26.15■■□□□ 1.78
TRIM3-209ENST00000529529 MLECQ14165 292 aa26.14■■□□□ 1.78
TRIM3-209ENST00000529529 MYT1LQ9UL68 1186 aa26.12■■□□□ 1.77
TRIM3-209ENST00000529529 MADDQ8WXG6 1647 aa26.11■■□□□ 1.77
TRIM3-209ENST00000529529 FYCO1Q9BQS8 1478 aa26.11■■□□□ 1.77
TRIM3-209ENST00000529529 PLPPR3Q6T4P5 718 aa26.09■■□□□ 1.77
TRIM3-209ENST00000529529 ATP10AO60312 1499 aa26.09■■□□□ 1.77
TRIM3-209ENST00000529529 ZNF518AQ6AHZ1 1483 aa26.06■■□□□ 1.76
TRIM3-209ENST00000529529 SIGLEC1Q9BZZ2 1709 aa26.02■■□□□ 1.76
TRIM3-209ENST00000529529 ZNF777Q9ULD5 760 aaPredicted RBP26.02■■□□□ 1.76
TRIM3-209ENST00000529529 C9orf84Q5VXU9 1444 aa26.02■■□□□ 1.76
TRIM3-209ENST00000529529 RIMS1Q86UR5 1692 aaKnown RBP26.02■■□□□ 1.76
TRIM3-209ENST00000529529 CDC42BPBQ9Y5S2 1711 aa26.02■■□□□ 1.76
TRIM3-209ENST00000529529 ILDR1Q86SU0 546 aaPredicted RBP25.99■■□□□ 1.75
TRIM3-209ENST00000529529 TRAPPC8Q9Y2L5 1435 aa25.98■■□□□ 1.75
TRIM3-209ENST00000529529 PREX2Q70Z35 1606 aa25.98■■□□□ 1.75
TRIM3-209ENST00000529529 ARHGEF12Q9NZN5 1544 aa25.98■■□□□ 1.75
TRIM3-209ENST00000529529 KDM5CP41229 1560 aa25.96■■□□□ 1.75
TRIM3-209ENST00000529529 MLH3Q9UHC1 1453 aa25.94■■□□□ 1.74
TRIM3-209ENST00000529529 GPATCH8Q9UKJ3 1502 aaKnown RBP25.93■■□□□ 1.74
TRIM3-209ENST00000529529 MTUS2Q5JR59 1369 aa25.93■■□□□ 1.74
TRIM3-209ENST00000529529 ABCC1P33527 1531 aa25.93■■□□□ 1.74
TRIM3-209ENST00000529529 CEP162Q5TB80 1403 aa25.92■■□□□ 1.74
TRIM3-209ENST00000529529 HNRNPMP52272 730 aaKnown RBP eCLIP25.92■■□□□ 1.74
TRIM3-209ENST00000529529 CFDP1Q9UEE9 299 aaPredicted RBP25.92■■□□□ 1.74
TRIM3-209ENST00000529529 CDC42BPAQ5VT25 1732 aa25.91■■□□□ 1.74
TRIM3-209ENST00000529529 LMTK3Q96Q04 1460 aa25.91■■□□□ 1.74
TRIM3-209ENST00000529529 LOC105371045A0A1W2PR82 267 aa25.9■■□□□ 1.74
TRIM3-209ENST00000529529 CEBPAP49715 358 aaPredicted RBP25.9■■□□□ 1.74
TRIM3-209ENST00000529529 CCNB3Q8WWL7 1395 aa25.9■■□□□ 1.74
TRIM3-209ENST00000529529 HSPA2P54652 639 aa25.89■■□□□ 1.74
TRIM3-209ENST00000529529 DIP2CQ9Y2E4 1556 aa25.88■■□□□ 1.73
TRIM3-209ENST00000529529 FER1L4A9Z1Z3 1794 aa25.86■■□□□ 1.73
TRIM3-209ENST00000529529 ITSN2Q9NZM3 1697 aa25.86■■□□□ 1.73
TRIM3-209ENST00000529529 SPAG9O60271 1321 aaKnown RBP25.85■■□□□ 1.73
TRIM3-209ENST00000529529 SAMD9LQ8IVG5 1584 aa25.83■■□□□ 1.73
TRIM3-209ENST00000529529 ABCA6Q8N139 1617 aa25.83■■□□□ 1.73
TRIM3-209ENST00000529529 ESF1Q9H501 851 aaKnown RBP25.82■■□□□ 1.72
TRIM3-209ENST00000529529 REREQ9P2R6 1566 aa25.82■■□□□ 1.72
TRIM3-209ENST00000529529 KIAA1107Q9UPP5 1409 aa25.8■■□□□ 1.72
TRIM3-209ENST00000529529 SYCP2Q9BX26 1530 aa25.79■■□□□ 1.72
TRIM3-209ENST00000529529 KIDINS220Q9ULH0 1771 aa25.79■■□□□ 1.72
TRIM3-209ENST00000529529 ZNF644Q9H582 1327 aaPredicted RBP25.78■■□□□ 1.72
TRIM3-209ENST00000529529 PLEKHH2Q8IVE3 1493 aa25.78■■□□□ 1.72
TRIM3-209ENST00000529529 AGLP35573 1532 aa25.77■■□□□ 1.72
TRIM3-209ENST00000529529 EHBP1L1Q8N3D4 1523 aa25.74■■□□□ 1.71
TRIM3-209ENST00000529529 TIAM1Q13009 1591 aa25.7■■□□□ 1.71
TRIM3-209ENST00000529529 ATP7AQ04656 1500 aa25.68■■□□□ 1.7
TRIM3-209ENST00000529529 FBXO41Q8TF61 875 aa25.66■■□□□ 1.7
TRIM3-209ENST00000529529 NCOA2Q15596 1464 aa25.66■■□□□ 1.7
TRIM3-209ENST00000529529 MBD5Q9P267 1494 aa25.65■■□□□ 1.7
TRIM3-209ENST00000529529 UHRF1BP1Q6BDS2 1440 aa25.64■■□□□ 1.7
TRIM3-209ENST00000529529 VPS8Q8N3P4 1428 aa25.64■■□□□ 1.7
TRIM3-209ENST00000529529 CNTLNQ9NXG0 1405 aa25.64■■□□□ 1.7
TRIM3-209ENST00000529529 A2MP01023 1474 aa25.64■■□□□ 1.69
TRIM3-209ENST00000529529 PREX1Q8TCU6 1659 aa25.64■■□□□ 1.69
TRIM3-209ENST00000529529 GGT6Q6P531 493 aa25.63■■□□□ 1.69
TRIM3-209ENST00000529529 INO80Q9ULG1 1556 aaPredicted RBP25.61■■□□□ 1.69
TRIM3-209ENST00000529529 C3P01024 1663 aa25.61■■□□□ 1.69
TRIM3-209ENST00000529529 SUPT6HQ7KZ85 1726 aaKnown RBP25.6■■□□□ 1.69
TRIM3-209ENST00000529529 ZMYM3Q14202 1370 aa25.6■■□□□ 1.69
TRIM3-209ENST00000529529 RSPH4AQ5TD94 716 aa25.59■■□□□ 1.69
TRIM3-209ENST00000529529 SETD1BQ9UPS6 1966 aaKnown RBP25.58■■□□□ 1.69
TRIM3-209ENST00000529529 RTEL1-TNFRSF6BF6WH68 1400 aa25.57■■□□□ 1.68
TRIM3-209ENST00000529529 KANK4Q5T7N3 995 aaPredicted RBP25.57■■□□□ 1.68
TRIM3-209ENST00000529529 DMRT2Q9Y5R5 561 aa25.57■■□□□ 1.68
TRIM3-209ENST00000529529 LRRC9Q6ZRR7 1453 aa25.56■■□□□ 1.68
TRIM3-209ENST00000529529 PLXNC1O60486 1568 aa25.54■■□□□ 1.68
TRIM3-209ENST00000529529 PPP6R1Q9UPN7 881 aa25.54■■□□□ 1.68
TRIM3-209ENST00000529529 CAMSAP2Q08AD1 1489 aa25.53■■□□□ 1.68
TRIM3-209ENST00000529529 DHX29Q7Z478 1369 aaKnown RBP25.53■■□□□ 1.68
TRIM3-209ENST00000529529 TSPY4P0CV99 314 aa25.52■■□□□ 1.68
TRIM3-209ENST00000529529 TSPY10P0CW01 314 aa25.52■■□□□ 1.68
TRIM3-209ENST00000529529 CERKQ8TCT0 537 aa25.51■■□□□ 1.67
TRIM3-209ENST00000529529 CCDC141Q6ZP82 1450 aa25.51■■□□□ 1.67
TRIM3-209ENST00000529529 ADGBQ8N7X0 1667 aa25.5■■□□□ 1.67
TRIM3-209ENST00000529529 NPATQ14207 1427 aa25.49■■□□□ 1.67
TRIM3-209ENST00000529529 KIF3BO15066 747 aa25.49■■□□□ 1.67
TRIM3-209ENST00000529529 MROH2AA6NES4 1674 aa25.47■■□□□ 1.67
TRIM3-209ENST00000529529 MAP3K1Q13233 1512 aa25.47■■□□□ 1.67
TRIM3-209ENST00000529529 CLTCQ00610 1675 aaKnown RBP25.46■■□□□ 1.67
TRIM3-209ENST00000529529 APLP2Q06481 763 aa25.46■■□□□ 1.67
TRIM3-209ENST00000529529 STRCQ7RTU9 1775 aa25.45■■□□□ 1.66
TRIM3-209ENST00000529529 PTPRKQ15262 1439 aa25.42■■□□□ 1.66
TRIM3-209ENST00000529529 ARHGEF5Q12774 1597 aa25.4■■□□□ 1.66
TRIM3-209ENST00000529529 PTPRTO14522 1441 aa25.39■■□□□ 1.66
TRIM3-209ENST00000529529 WASHC2CQ9Y4E1 1318 aa25.38■■□□□ 1.65
TRIM3-209ENST00000529529 MYOM3Q5VTT5 1437 aa25.37■■□□□ 1.65
TRIM3-209ENST00000529529 MIA2Q96PC5 1412 aa25.37■■□□□ 1.65
TRIM3-209ENST00000529529 NCOA1Q15788 1441 aa25.37■■□□□ 1.65
TRIM3-209ENST00000529529 FBXO31Q5XUX0 539 aaPredicted RBP25.36■■□□□ 1.65
TRIM3-209ENST00000529529 NCKAP5LQ9HCH0 1330 aa25.36■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms