RNA–Protein interactions for RNA: ENST00000529386.5

CMTM1-212, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 924 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-212ENST00000529386 PREX2Q70Z35 1606 aa21.76■■□□□ 1.07
CMTM1-212ENST00000529386 FANCAO15360 1455 aa21.76■■□□□ 1.07
CMTM1-212ENST00000529386 PPRC1Q5VV67 1664 aaKnown RBP21.75■■□□□ 1.07
CMTM1-212ENST00000529386 GPATCH8Q9UKJ3 1502 aaKnown RBP21.75■■□□□ 1.07
CMTM1-212ENST00000529386 CDC42BPAQ5VT25 1732 aa21.75■■□□□ 1.07
CMTM1-212ENST00000529386 CDC42BPBQ9Y5S2 1711 aa21.72■■□□□ 1.07
CMTM1-212ENST00000529386 MYOM3Q5VTT5 1437 aa21.7■■□□□ 1.06
CMTM1-212ENST00000529386 AKNAQ7Z591 1439 aa21.7■■□□□ 1.06
CMTM1-212ENST00000529386 ZNF777Q9ULD5 760 aaPredicted RBP21.69■■□□□ 1.06
CMTM1-212ENST00000529386 PPARGC1BQ86YN6 1023 aaKnown RBP21.68■■□□□ 1.06
CMTM1-212ENST00000529386 MIA2Q96PC5 1412 aa21.68■■□□□ 1.06
CMTM1-212ENST00000529386 PLEKHH2Q8IVE3 1493 aa21.67■■□□□ 1.06
CMTM1-212ENST00000529386 ADGRL1O94910 1474 aa21.65■■□□□ 1.06
CMTM1-212ENST00000529386 KDM6BO15054 1643 aa21.62■■□□□ 1.05
CMTM1-212ENST00000529386 SCAPERQ9BY12 1400 aa21.62■■□□□ 1.05
CMTM1-212ENST00000529386 DENND4BO75064 1496 aaPredicted RBP21.61■■□□□ 1.05
CMTM1-212ENST00000529386 KIAA1107Q9UPP5 1409 aa21.61■■□□□ 1.05
CMTM1-212ENST00000529386 FGD6Q6ZV73 1430 aa21.6■■□□□ 1.05
CMTM1-212ENST00000529386 SAMD9LQ8IVG5 1584 aa21.58■■□□□ 1.05
CMTM1-212ENST00000529386 RSPH4AQ5TD94 716 aa21.58■■□□□ 1.05
CMTM1-212ENST00000529386 ABCC1P33527 1531 aa21.58■■□□□ 1.04
CMTM1-212ENST00000529386 CAMSAP2Q08AD1 1489 aa21.57■■□□□ 1.04
CMTM1-212ENST00000529386 ZNF518AQ6AHZ1 1483 aa21.55■■□□□ 1.04
CMTM1-212ENST00000529386 PTPN23Q9H3S7 1636 aa21.55■■□□□ 1.04
CMTM1-212ENST00000529386 ZNF644Q9H582 1327 aaPredicted RBP21.55■■□□□ 1.04
CMTM1-212ENST00000529386 SYCP2Q9BX26 1530 aa21.54■■□□□ 1.04
CMTM1-212ENST00000529386 POGZQ7Z3K3 1410 aa21.54■■□□□ 1.04
CMTM1-212ENST00000529386 RAPGEF3O95398 923 aa21.53■■□□□ 1.04
CMTM1-212ENST00000529386 HNRNPMP52272 730 aaKnown RBP eCLIP21.53■■□□□ 1.04
CMTM1-212ENST00000529386 FAM50AQ14320 339 aaKnown RBP21.52■■□□□ 1.04
CMTM1-212ENST00000529386 TCOF1Q13428 1488 aaKnown RBP21.52■■□□□ 1.03
CMTM1-212ENST00000529386 COL17A1Q9UMD9 1497 aaPredicted RBP21.52■■□□□ 1.03
CMTM1-212ENST00000529386 RICTORQ6R327 1708 aa21.5■■□□□ 1.03
CMTM1-212ENST00000529386 ARHGEF12Q9NZN5 1544 aa21.5■■□□□ 1.03
CMTM1-212ENST00000529386 TSPY4P0CV99 314 aa21.49■■□□□ 1.03
CMTM1-212ENST00000529386 TSPY10P0CW01 314 aa21.49■■□□□ 1.03
CMTM1-212ENST00000529386 MYT1LQ9UL68 1186 aa21.49■■□□□ 1.03
CMTM1-212ENST00000529386 CCDC141Q6ZP82 1450 aa21.48■■□□□ 1.03
CMTM1-212ENST00000529386 AFAP1Q8N556 730 aa21.48■■□□□ 1.03
CMTM1-212ENST00000529386 ARHGEF5Q12774 1597 aa21.48■■□□□ 1.03
CMTM1-212ENST00000529386 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.48■■□□□ 1.03
CMTM1-212ENST00000529386 TRAPPC8Q9Y2L5 1435 aa21.47■■□□□ 1.03
CMTM1-212ENST00000529386 MAGI2Q86UL8 1455 aa21.47■■□□□ 1.03
CMTM1-212ENST00000529386 MBD5Q9P267 1494 aa21.47■■□□□ 1.03
CMTM1-212ENST00000529386 SPAG9O60271 1321 aaKnown RBP21.46■■□□□ 1.03
CMTM1-212ENST00000529386 RRBP1Q9P2E9 1410 aaKnown RBP21.46■■□□□ 1.03
CMTM1-212ENST00000529386 ZMYM4Q5VZL5 1548 aa21.45■■□□□ 1.02
CMTM1-212ENST00000529386 KDM5CP41229 1560 aa21.44■■□□□ 1.02
CMTM1-212ENST00000529386 FRMPD1Q5SYB0 1578 aa21.44■■□□□ 1.02
CMTM1-212ENST00000529386 MLH3Q9UHC1 1453 aa21.42■■□□□ 1.02
CMTM1-212ENST00000529386 HECW2Q9P2P5 1572 aa21.41■■□□□ 1.02
CMTM1-212ENST00000529386 DNMT1P26358 1616 aaKnown RBP21.4■■□□□ 1.02
CMTM1-212ENST00000529386 ZFYVE16Q7Z3T8 1539 aa21.39■■□□□ 1.02
CMTM1-212ENST00000529386 RTEL1-TNFRSF6BF6WH68 1400 aa21.39■■□□□ 1.02
CMTM1-212ENST00000529386 DAPK1P53355 1430 aa21.39■■□□□ 1.02
CMTM1-212ENST00000529386 SHANK2Q9UPX8 1470 aa21.38■■□□□ 1.01
CMTM1-212ENST00000529386 ABCC5O15440 1437 aa21.37■■□□□ 1.01
CMTM1-212ENST00000529386 C9orf84Q5VXU9 1444 aa21.37■■□□□ 1.01
CMTM1-212ENST00000529386 ATP7AQ04656 1500 aa21.36■■□□□ 1.01
CMTM1-212ENST00000529386 MAST1Q9Y2H9 1570 aa21.35■■□□□ 1.01
CMTM1-212ENST00000529386 ARHGEF40Q8TER5 1519 aa21.34■■□□□ 1.01
CMTM1-212ENST00000529386 CROCC2H7BZ55 1655 aa21.34■■□□□ 1.01
CMTM1-212ENST00000529386 INO80Q9ULG1 1556 aaPredicted RBP21.34■■□□□ 1.01
CMTM1-212ENST00000529386 ITGAEP38570 1179 aa21.33■■□□□ 1.01
CMTM1-212ENST00000529386 KIDINS220Q9ULH0 1771 aa21.33■■□□□ 1
CMTM1-212ENST00000529386 ATP10AO60312 1499 aa21.32■■□□□ 1
CMTM1-212ENST00000529386 ANKRD30AQ9BXX3 1397 aa21.32■■□□□ 1
CMTM1-212ENST00000529386 YEATS2Q9ULM3 1422 aa21.31■■□□□ 1
CMTM1-212ENST00000529386 CHIC2Q9UKJ5 165 aa21.29■■□□□ 1
CMTM1-212ENST00000529386 ADGBQ8N7X0 1667 aa21.28■■□□□ 1
CMTM1-212ENST00000529386 DIP2CQ9Y2E4 1556 aa21.27■■□□□ 1
CMTM1-212ENST00000529386 ABCA6Q8N139 1617 aa21.27■■□□□ 1
CMTM1-212ENST00000529386 PLXNC1O60486 1568 aa21.27■□□□□ 0.99
CMTM1-212ENST00000529386 ROCK1Q13464 1354 aa21.26■□□□□ 0.99
CMTM1-212ENST00000529386 ARID4BQ4LE39 1312 aaPredicted RBP21.26■□□□□ 0.99
CMTM1-212ENST00000529386 REREQ9P2R6 1566 aa21.25■□□□□ 0.99
CMTM1-212ENST00000529386 ADGRL2O95490 1459 aa21.25■□□□□ 0.99
CMTM1-212ENST00000529386 A2MP01023 1474 aa21.25■□□□□ 0.99
CMTM1-212ENST00000529386 KIF15Q9NS87 1388 aa21.23■□□□□ 0.99
CMTM1-212ENST00000529386 NCOA1Q15788 1441 aa21.23■□□□□ 0.99
CMTM1-212ENST00000529386 RRP7BPQ9NSQ0 103 aa21.23■□□□□ 0.99
CMTM1-212ENST00000529386 DHX29Q7Z478 1369 aaKnown RBP21.23■□□□□ 0.99
CMTM1-212ENST00000529386 DUOX2Q9NRD8 1548 aa21.22■□□□□ 0.99
CMTM1-212ENST00000529386 PTPRKQ15262 1439 aa21.21■□□□□ 0.99
CMTM1-212ENST00000529386 AGLP35573 1532 aa21.19■□□□□ 0.98
CMTM1-212ENST00000529386 TRIM26Q12899 539 aaPredicted RBP21.17■□□□□ 0.98
CMTM1-212ENST00000529386 ERBINQ96RT1 1412 aa21.17■□□□□ 0.98
CMTM1-212ENST00000529386 ANKRD50Q9ULJ7 1429 aa21.13■□□□□ 0.97
CMTM1-212ENST00000529386 KIF3BO15066 747 aa21.13■□□□□ 0.97
CMTM1-212ENST00000529386 EIF2AK4Q9P2K8 1649 aaKnown RBP21.13■□□□□ 0.97
CMTM1-212ENST00000529386 ESF1Q9H501 851 aaKnown RBP21.11■□□□□ 0.97
CMTM1-212ENST00000529386 PPP6R1Q9UPN7 881 aa21.11■□□□□ 0.97
CMTM1-212ENST00000529386 HFM1A2PYH4 1435 aa21.11■□□□□ 0.97
CMTM1-212ENST00000529386 BCORL1Q5H9F3 1711 aa21.09■□□□□ 0.97
CMTM1-212ENST00000529386 MLECQ14165 292 aa21.09■□□□□ 0.97
CMTM1-212ENST00000529386 ACIN1Q9UKV3 1341 aaKnown RBP21.08■□□□□ 0.97
CMTM1-212ENST00000529386 GGT6Q6P531 493 aa21.08■□□□□ 0.97
CMTM1-212ENST00000529386 NAIPQ13075 1403 aa21.07■□□□□ 0.96
CMTM1-212ENST00000529386 SIGLEC1Q9BZZ2 1709 aa21.07■□□□□ 0.96
CMTM1-212ENST00000529386 GCC2Q8IWJ2 1684 aa21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms