RNA–Protein interactions for RNA: ENST00000529371.5

LTBP3-213, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 2

Gene LTBP3, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-213ENST00000529371 CDC42BPAQ5VT25 1732 aa38.75■■■■□ 3.79
LTBP3-213ENST00000529371 EFCAB2Q5VUJ9 269 aa38.75■■■■□ 3.79
LTBP3-213ENST00000529371 KDM6BO15054 1643 aa38.74■■■■□ 3.79
LTBP3-213ENST00000529371 ITSN2Q9NZM3 1697 aa38.72■■■■□ 3.79
LTBP3-213ENST00000529371 GPATCH8Q9UKJ3 1502 aaKnown RBP38.72■■■■□ 3.79
LTBP3-213ENST00000529371 CDC42BPBQ9Y5S2 1711 aa38.7■■■■□ 3.79
LTBP3-213ENST00000529371 AKNAQ7Z591 1439 aa38.68■■■■□ 3.78
LTBP3-213ENST00000529371 CFDP1Q9UEE9 299 aaPredicted RBP38.66■■■■□ 3.78
LTBP3-213ENST00000529371 ADGRL1O94910 1474 aa38.61■■■■□ 3.77
LTBP3-213ENST00000529371 ZNF777Q9ULD5 760 aaPredicted RBP38.6■■■■□ 3.77
LTBP3-213ENST00000529371 MYOM3Q5VTT5 1437 aa38.55■■■■□ 3.76
LTBP3-213ENST00000529371 DENND4BO75064 1496 aaPredicted RBP38.54■■■■□ 3.76
LTBP3-213ENST00000529371 COL17A1Q9UMD9 1497 aaPredicted RBP38.54■■■■□ 3.76
LTBP3-213ENST00000529371 SCAPERQ9BY12 1400 aa38.54■■■■□ 3.76
LTBP3-213ENST00000529371 PPARGC1BQ86YN6 1023 aaKnown RBP38.52■■■■□ 3.76
LTBP3-213ENST00000529371 SAMD9LQ8IVG5 1584 aa38.51■■■■□ 3.76
LTBP3-213ENST00000529371 ABCC1P33527 1531 aa38.5■■■■□ 3.75
LTBP3-213ENST00000529371 PLEKHH2Q8IVE3 1493 aa38.5■■■■□ 3.75
LTBP3-213ENST00000529371 MIA2Q96PC5 1412 aa38.46■■■■□ 3.75
LTBP3-213ENST00000529371 RAPGEF3O95398 923 aa38.44■■■■□ 3.74
LTBP3-213ENST00000529371 POGZQ7Z3K3 1410 aa38.43■■■■□ 3.74
LTBP3-213ENST00000529371 SYCP2Q9BX26 1530 aa38.42■■■■□ 3.74
LTBP3-213ENST00000529371 CAMSAP2Q08AD1 1489 aa38.41■■■■□ 3.74
LTBP3-213ENST00000529371 RICTORQ6R327 1708 aa38.41■■■■□ 3.74
LTBP3-213ENST00000529371 KIAA1107Q9UPP5 1409 aa38.4■■■■□ 3.74
LTBP3-213ENST00000529371 FRMPD1Q5SYB0 1578 aa38.4■■■■□ 3.74
LTBP3-213ENST00000529371 ZNF518AQ6AHZ1 1483 aa38.39■■■■□ 3.74
LTBP3-213ENST00000529371 ZNF644Q9H582 1327 aaPredicted RBP38.38■■■■□ 3.74
LTBP3-213ENST00000529371 FGD6Q6ZV73 1430 aa38.38■■■■□ 3.73
LTBP3-213ENST00000529371 ARHGEF12Q9NZN5 1544 aa38.36■■■■□ 3.73
LTBP3-213ENST00000529371 HNRNPMP52272 730 aaKnown RBP eCLIP38.34■■■■□ 3.73
LTBP3-213ENST00000529371 PTPN23Q9H3S7 1636 aa38.32■■■■□ 3.73
LTBP3-213ENST00000529371 TRAPPC8Q9Y2L5 1435 aa38.31■■■■□ 3.72
LTBP3-213ENST00000529371 ZMYM4Q5VZL5 1548 aa38.31■■■■□ 3.72
LTBP3-213ENST00000529371 AFAP1Q8N556 730 aa38.28■■■■□ 3.72
LTBP3-213ENST00000529371 MYT1LQ9UL68 1186 aa38.27■■■■□ 3.72
LTBP3-213ENST00000529371 KDM5CP41229 1560 aa38.27■■■■□ 3.72
LTBP3-213ENST00000529371 TCOF1Q13428 1488 aaKnown RBP38.23■■■■□ 3.71
LTBP3-213ENST00000529371 MAGI2Q86UL8 1455 aa38.23■■■■□ 3.71
LTBP3-213ENST00000529371 MBD5Q9P267 1494 aa38.23■■■■□ 3.71
LTBP3-213ENST00000529371 RSPH4AQ5TD94 716 aa38.23■■■■□ 3.71
LTBP3-213ENST00000529371 CCDC141Q6ZP82 1450 aa38.22■■■■□ 3.71
LTBP3-213ENST00000529371 ARHGEF5Q12774 1597 aa38.22■■■■□ 3.71
LTBP3-213ENST00000529371 HECW2Q9P2P5 1572 aa38.22■■■■□ 3.71
LTBP3-213ENST00000529371 ZFYVE16Q7Z3T8 1539 aa38.2■■■■□ 3.71
LTBP3-213ENST00000529371 FAM50AQ14320 339 aaKnown RBP38.19■■■■□ 3.7
LTBP3-213ENST00000529371 SPAG9O60271 1321 aaKnown RBP38.18■■■■□ 3.7
LTBP3-213ENST00000529371 ARHGEF40Q8TER5 1519 aa38.17■■■■□ 3.7
LTBP3-213ENST00000529371 MLH3Q9UHC1 1453 aa38.15■■■■□ 3.7
LTBP3-213ENST00000529371 TSPY4P0CV99 314 aa38.11■■■■□ 3.69
LTBP3-213ENST00000529371 TSPY10P0CW01 314 aa38.11■■■■□ 3.69
LTBP3-213ENST00000529371 YEATS2Q9ULM3 1422 aa38.11■■■■□ 3.69
LTBP3-213ENST00000529371 ATP7AQ04656 1500 aa38.09■■■■□ 3.69
LTBP3-213ENST00000529371 INO80Q9ULG1 1556 aaPredicted RBP38.07■■■■□ 3.69
LTBP3-213ENST00000529371 DNMT1P26358 1616 aaKnown RBP38.07■■■■□ 3.68
LTBP3-213ENST00000529371 KIDINS220Q9ULH0 1771 aa38.06■■■■□ 3.68
LTBP3-213ENST00000529371 DAPK1P53355 1430 aa38.04■■■■□ 3.68
LTBP3-213ENST00000529371 RRBP1Q9P2E9 1410 aaKnown RBP38.04■■■■□ 3.68
LTBP3-213ENST00000529371 RTEL1-TNFRSF6BF6WH68 1400 aa38.04■■■■□ 3.68
LTBP3-213ENST00000529371 ABCC5O15440 1437 aa38.02■■■■□ 3.68
LTBP3-213ENST00000529371 DIP2CQ9Y2E4 1556 aa38.02■■■■□ 3.68
LTBP3-213ENST00000529371 ABCA6Q8N139 1617 aa38.01■■■■□ 3.68
LTBP3-213ENST00000529371 ATP10AO60312 1499 aa38.01■■■■□ 3.67
LTBP3-213ENST00000529371 CROCC2H7BZ55 1655 aa38.01■■■■□ 3.67
LTBP3-213ENST00000529371 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP38■■■■□ 3.67
LTBP3-213ENST00000529371 C9orf84Q5VXU9 1444 aa38■■■■□ 3.67
LTBP3-213ENST00000529371 SHANK2Q9UPX8 1470 aa38■■■■□ 3.67
LTBP3-213ENST00000529371 MAST1Q9Y2H9 1570 aa37.99■■■■□ 3.67
LTBP3-213ENST00000529371 ARID4BQ4LE39 1312 aaPredicted RBP37.91■■■■□ 3.66
LTBP3-213ENST00000529371 ADGBQ8N7X0 1667 aa37.9■■■■□ 3.66
LTBP3-213ENST00000529371 REREQ9P2R6 1566 aa37.89■■■■□ 3.66
LTBP3-213ENST00000529371 ITGAEP38570 1179 aa37.87■■■■□ 3.65
LTBP3-213ENST00000529371 PLXNC1O60486 1568 aa37.86■■■■□ 3.65
LTBP3-213ENST00000529371 A2MP01023 1474 aa37.86■■■■□ 3.65
LTBP3-213ENST00000529371 CHIC2Q9UKJ5 165 aa37.85■■■■□ 3.65
LTBP3-213ENST00000529371 ANKRD30AQ9BXX3 1397 aa37.83■■■■□ 3.65
LTBP3-213ENST00000529371 ADGRL2O95490 1459 aa37.77■■■■□ 3.64
LTBP3-213ENST00000529371 KIF15Q9NS87 1388 aa37.77■■■■□ 3.64
LTBP3-213ENST00000529371 AGLP35573 1532 aa37.77■■■■□ 3.64
LTBP3-213ENST00000529371 DHX29Q7Z478 1369 aaKnown RBP37.76■■■■□ 3.64
LTBP3-213ENST00000529371 SIGLEC1Q9BZZ2 1709 aa37.75■■■■□ 3.63
LTBP3-213ENST00000529371 RRP7BPQ9NSQ0 103 aa37.75■■■■□ 3.63
LTBP3-213ENST00000529371 PTPRKQ15262 1439 aa37.75■■■■□ 3.63
LTBP3-213ENST00000529371 DUOX2Q9NRD8 1548 aa37.73■■■■□ 3.63
LTBP3-213ENST00000529371 NCOA1Q15788 1441 aa37.72■■■■□ 3.63
LTBP3-213ENST00000529371 ROCK1Q13464 1354 aa37.69■■■■□ 3.62
LTBP3-213ENST00000529371 MLECQ14165 292 aa37.69■■■■□ 3.62
LTBP3-213ENST00000529371 BCORL1Q5H9F3 1711 aa37.69■■■■□ 3.62
LTBP3-213ENST00000529371 ERBINQ96RT1 1412 aa37.63■■■■□ 3.61
LTBP3-213ENST00000529371 KIF3BO15066 747 aa37.62■■■■□ 3.61
LTBP3-213ENST00000529371 EIF2AK4Q9P2K8 1649 aaKnown RBP37.61■■■■□ 3.61
LTBP3-213ENST00000529371 ADAMTSL3P82987 1691 aa37.57■■■■□ 3.61
LTBP3-213ENST00000529371 GGT6Q6P531 493 aa37.55■■■■□ 3.6
LTBP3-213ENST00000529371 ANKRD50Q9ULJ7 1429 aa37.54■■■■□ 3.6
LTBP3-213ENST00000529371 ESF1Q9H501 851 aaKnown RBP37.54■■■■□ 3.6
LTBP3-213ENST00000529371 KDM4FA0A1W2PPD8 638 aa37.53■■■■□ 3.6
LTBP3-213ENST00000529371 MADDQ8WXG6 1647 aa37.53■■■■□ 3.6
LTBP3-213ENST00000529371 FER1L4A9Z1Z3 1794 aa37.52■■■■□ 3.6
LTBP3-213ENST00000529371 RNF17Q9BXT8 1623 aaKnown RBP37.48■■■■□ 3.59
LTBP3-213ENST00000529371 RIMS1Q86UR5 1692 aaKnown RBP37.45■■■■□ 3.59
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms