RNA–Protein interactions for RNA: ENST00000529273.1

ROM1-204, Transcript of retinal outer segment membrane protein 1, humanhuman

TSL 4

Gene ROM1, Length 249 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ROM1-204ENST00000529273 POGZQ7Z3K3 1410 aa44.68■■■■■ 4.74
ROM1-204ENST00000529273 ARHGAP5Q13017 1502 aa44.65■■■■■ 4.74
ROM1-204ENST00000529273 YEATS2Q9ULM3 1422 aa44.64■■■■■ 4.74
ROM1-204ENST00000529273 MAGI2Q86UL8 1455 aa44.64■■■■■ 4.74
ROM1-204ENST00000529273 ZFYVE16Q7Z3T8 1539 aa44.62■■■■■ 4.73
ROM1-204ENST00000529273 ADAMTSL3P82987 1691 aa44.61■■■■■ 4.73
ROM1-204ENST00000529273 BCORL1Q5H9F3 1711 aa44.55■■■■■ 4.72
ROM1-204ENST00000529273 PTPRMP28827 1452 aa44.53■■■■■ 4.72
ROM1-204ENST00000529273 CEP162Q5TB80 1403 aa44.51■■■■■ 4.72
ROM1-204ENST00000529273 AFAP1Q8N556 730 aa44.5■■■■■ 4.71
ROM1-204ENST00000529273 HECW2Q9P2P5 1572 aa44.5■■■■■ 4.71
ROM1-204ENST00000529273 ZNF518AQ6AHZ1 1483 aa44.48■■■■■ 4.71
ROM1-204ENST00000529273 CDC42BPBQ9Y5S2 1711 aa44.47■■■■■ 4.71
ROM1-204ENST00000529273 PREX2Q70Z35 1606 aa44.45■■■■■ 4.71
ROM1-204ENST00000529273 MADDQ8WXG6 1647 aa44.44■■■■■ 4.7
ROM1-204ENST00000529273 ATP10AO60312 1499 aa44.42■■■■■ 4.7
ROM1-204ENST00000529273 SIGLEC1Q9BZZ2 1709 aa44.38■■■■■ 4.7
ROM1-204ENST00000529273 KDM5CP41229 1560 aa44.37■■■■■ 4.69
ROM1-204ENST00000529273 LOC105371045A0A1W2PR82 267 aa44.36■■■■■ 4.69
ROM1-204ENST00000529273 MYT1LQ9UL68 1186 aa44.36■■■■■ 4.69
ROM1-204ENST00000529273 C9orf84Q5VXU9 1444 aa44.35■■■■■ 4.69
ROM1-204ENST00000529273 MLECQ14165 292 aa44.35■■■■■ 4.69
ROM1-204ENST00000529273 ARHGEF12Q9NZN5 1544 aa44.34■■■■■ 4.69
ROM1-204ENST00000529273 ABCC1P33527 1531 aa44.34■■■■■ 4.69
ROM1-204ENST00000529273 MTUS2Q5JR59 1369 aa44.33■■■■■ 4.69
ROM1-204ENST00000529273 CDC42BPAQ5VT25 1732 aa44.33■■■■■ 4.69
ROM1-204ENST00000529273 TRAPPC8Q9Y2L5 1435 aa44.33■■■■■ 4.69
ROM1-204ENST00000529273 GPATCH8Q9UKJ3 1502 aaKnown RBP44.32■■■■■ 4.69
ROM1-204ENST00000529273 ZNF777Q9ULD5 760 aaPredicted RBP44.3■■■■■ 4.68
ROM1-204ENST00000529273 RIMS1Q86UR5 1692 aaKnown RBP44.27■■■■■ 4.68
ROM1-204ENST00000529273 MLH3Q9UHC1 1453 aa44.26■■■■■ 4.68
ROM1-204ENST00000529273 CCNB3Q8WWL7 1395 aa44.24■■■■■ 4.67
ROM1-204ENST00000529273 CFDP1Q9UEE9 299 aaPredicted RBP44.22■■■■■ 4.67
ROM1-204ENST00000529273 ITSN2Q9NZM3 1697 aa44.22■■■■■ 4.67
ROM1-204ENST00000529273 DIP2CQ9Y2E4 1556 aa44.18■■■■■ 4.66
ROM1-204ENST00000529273 PLPPR3Q6T4P5 718 aa44.18■■■■■ 4.66
ROM1-204ENST00000529273 SAMD9LQ8IVG5 1584 aa44.18■■■■■ 4.66
ROM1-204ENST00000529273 HNRNPMP52272 730 aaKnown RBP eCLIP44.14■■■■■ 4.66
ROM1-204ENST00000529273 EHBP1L1Q8N3D4 1523 aa44.14■■■■■ 4.66
ROM1-204ENST00000529273 ABCA6Q8N139 1617 aa44.11■■■■■ 4.65
ROM1-204ENST00000529273 SYCP2Q9BX26 1530 aa44.11■■■■■ 4.65
ROM1-204ENST00000529273 REREQ9P2R6 1566 aa44.09■■■■■ 4.65
ROM1-204ENST00000529273 KIAA1107Q9UPP5 1409 aa44.08■■■■■ 4.65
ROM1-204ENST00000529273 PLEKHH2Q8IVE3 1493 aa44.08■■■■■ 4.65
ROM1-204ENST00000529273 FER1L4A9Z1Z3 1794 aa44.07■■■■■ 4.65
ROM1-204ENST00000529273 SPAG9O60271 1321 aaKnown RBP44.04■■■■■ 4.64
ROM1-204ENST00000529273 LMTK3Q96Q04 1460 aa44.03■■■■■ 4.64
ROM1-204ENST00000529273 KIDINS220Q9ULH0 1771 aa44.03■■■■■ 4.64
ROM1-204ENST00000529273 TIAM1Q13009 1591 aa44.02■■■■■ 4.64
ROM1-204ENST00000529273 VPS8Q8N3P4 1428 aa44.02■■■■■ 4.64
ROM1-204ENST00000529273 AGLP35573 1532 aa43.99■■■■■ 4.63
ROM1-204ENST00000529273 ZNF644Q9H582 1327 aaPredicted RBP43.99■■■■■ 4.63
ROM1-204ENST00000529273 CEBPAP49715 358 aaPredicted RBP43.94■■■■■ 4.62
ROM1-204ENST00000529273 NCOA2Q15596 1464 aa43.91■■■■■ 4.62
ROM1-204ENST00000529273 HSPA2P54652 639 aa43.87■■■■■ 4.61
ROM1-204ENST00000529273 ATP7AQ04656 1500 aa43.87■■■■■ 4.61
ROM1-204ENST00000529273 ESF1Q9H501 851 aaKnown RBP43.85■■■■■ 4.61
ROM1-204ENST00000529273 SUPT6HQ7KZ85 1726 aaKnown RBP43.85■■■■■ 4.61
ROM1-204ENST00000529273 MBD5Q9P267 1494 aa43.84■■■■■ 4.61
ROM1-204ENST00000529273 INO80Q9ULG1 1556 aaPredicted RBP43.82■■■■■ 4.61
ROM1-204ENST00000529273 LRRC9Q6ZRR7 1453 aa43.8■■■■■ 4.6
ROM1-204ENST00000529273 A2MP01023 1474 aa43.76■■■■■ 4.6
ROM1-204ENST00000529273 ILDR1Q86SU0 546 aaPredicted RBP43.75■■■■■ 4.59
ROM1-204ENST00000529273 KANK4Q5T7N3 995 aaPredicted RBP43.73■■■■■ 4.59
ROM1-204ENST00000529273 MAP3K1Q13233 1512 aa43.72■■■■■ 4.59
ROM1-204ENST00000529273 CAMSAP2Q08AD1 1489 aa43.7■■■■■ 4.59
ROM1-204ENST00000529273 CNTLNQ9NXG0 1405 aa43.7■■■■■ 4.59
ROM1-204ENST00000529273 RTEL1-TNFRSF6BF6WH68 1400 aa43.68■■■■■ 4.58
ROM1-204ENST00000529273 PLXNC1O60486 1568 aa43.67■■■■■ 4.58
ROM1-204ENST00000529273 RSPH4AQ5TD94 716 aa43.66■■■■■ 4.58
ROM1-204ENST00000529273 PREX1Q8TCU6 1659 aa43.64■■■■■ 4.58
ROM1-204ENST00000529273 CCDC141Q6ZP82 1450 aa43.64■■■■■ 4.58
ROM1-204ENST00000529273 C3P01024 1663 aa43.63■■■■■ 4.58
ROM1-204ENST00000529273 UHRF1BP1Q6BDS2 1440 aa43.61■■■■■ 4.57
ROM1-204ENST00000529273 GGT6Q6P531 493 aa43.59■■■■■ 4.57
ROM1-204ENST00000529273 ADGBQ8N7X0 1667 aa43.58■■■■■ 4.57
ROM1-204ENST00000529273 ZMYM3Q14202 1370 aa43.55■■■■■ 4.56
ROM1-204ENST00000529273 DHX29Q7Z478 1369 aaKnown RBP43.55■■■■■ 4.56
ROM1-204ENST00000529273 SETD1BQ9UPS6 1966 aaKnown RBP43.54■■■■■ 4.56
ROM1-204ENST00000529273 APLP2Q06481 763 aa43.53■■■■■ 4.56
ROM1-204ENST00000529273 TSPY4P0CV99 314 aa43.5■■■■■ 4.55
ROM1-204ENST00000529273 TSPY10P0CW01 314 aa43.5■■■■■ 4.55
ROM1-204ENST00000529273 ARHGEF5Q12774 1597 aa43.5■■■■■ 4.55
ROM1-204ENST00000529273 PPP6R1Q9UPN7 881 aa43.49■■■■■ 4.55
ROM1-204ENST00000529273 MYOM3Q5VTT5 1437 aa43.48■■■■■ 4.55
ROM1-204ENST00000529273 MROH2AA6NES4 1674 aa43.47■■■■■ 4.55
ROM1-204ENST00000529273 MIA2Q96PC5 1412 aa43.45■■■■■ 4.55
ROM1-204ENST00000529273 NPATQ14207 1427 aa43.44■■■■■ 4.54
ROM1-204ENST00000529273 KIF3BO15066 747 aa43.42■■■■■ 4.54
ROM1-204ENST00000529273 CLTCQ00610 1675 aaKnown RBP43.42■■■■■ 4.54
ROM1-204ENST00000529273 DMRT2Q9Y5R5 561 aa43.33■■■■■ 4.53
ROM1-204ENST00000529273 PTPRKQ15262 1439 aa43.32■■■■■ 4.53
ROM1-204ENST00000529273 FBXO41Q8TF61 875 aa43.32■■■■■ 4.53
ROM1-204ENST00000529273 STRCQ7RTU9 1775 aa43.29■■■■■ 4.52
ROM1-204ENST00000529273 MAST1Q9Y2H9 1570 aa43.27■■■■■ 4.52
ROM1-204ENST00000529273 WASHC2CQ9Y4E1 1318 aa43.22■■■■■ 4.51
ROM1-204ENST00000529273 NCOA1Q15788 1441 aa43.18■■■■■ 4.5
ROM1-204ENST00000529273 KDM5DQ9BY66 1539 aa43.17■■■■■ 4.5
ROM1-204ENST00000529273 CERKQ8TCT0 537 aa43.16■■■■■ 4.5
ROM1-204ENST00000529273 FAM135AQ9P2D6 1515 aa43.16■■■■■ 4.5
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms