RNA–Protein interactions for RNA: ENST00000529272.5

EEF1D-225, Transcript of eukaryotic translation elongation factor 1 delta, human

APPRIS ALT2 TSL 2 BASIC

Gene EEF1D, Length 1,311 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EEF1D-225	ENST00000529272	MADD	Q8WXG6	1647 aa		31.96	■■■□□ 2.71
EEF1D-225	ENST00000529272	TRO	Q12816	1431 aa	Predicted RBP	31.96	■■■□□ 2.71
EEF1D-225	ENST00000529272	MAGI2	Q86UL8	1455 aa		31.96	■■■□□ 2.71
EEF1D-225	ENST00000529272	YEATS2	Q9ULM3	1422 aa		31.95	■■■□□ 2.71
EEF1D-225	ENST00000529272	EFCAB2	Q5VUJ9	269 aa		31.95	■■■□□ 2.7
EEF1D-225	ENST00000529272	SIGLEC1	Q9BZZ2	1709 aa		31.94	■■■□□ 2.7
EEF1D-225	ENST00000529272	ZFYVE16	Q7Z3T8	1539 aa		31.92	■■■□□ 2.7
EEF1D-225	ENST00000529272	POGZ	Q7Z3K3	1410 aa		31.92	■■■□□ 2.7
EEF1D-225	ENST00000529272	ILDR1	Q86SU0	546 aa	Predicted RBP	31.89	■■■□□ 2.7
EEF1D-225	ENST00000529272	CASKIN1	Q8WXD9	1431 aa		31.88	■■■□□ 2.69
EEF1D-225	ENST00000529272	PCF11	O94913	1555 aa	Known RBP	31.85	■■■□□ 2.69
EEF1D-225	ENST00000529272	RIMS1	Q86UR5	1692 aa	Known RBP	31.84	■■■□□ 2.69
EEF1D-225	ENST00000529272	CDC42BPB	Q9Y5S2	1711 aa		31.83	■■■□□ 2.69
EEF1D-225	ENST00000529272	ARHGAP5	Q13017	1502 aa		31.79	■■■□□ 2.68
EEF1D-225	ENST00000529272	ATP10A	O60312	1499 aa		31.79	■■■□□ 2.68
EEF1D-225	ENST00000529272	CCDC18	Q5T9S5	1454 aa		31.79	■■■□□ 2.68
EEF1D-225	ENST00000529272	VPS8	Q8N3P4	1428 aa		31.79	■■■□□ 2.68
EEF1D-225	ENST00000529272	FYCO1	Q9BQS8	1478 aa		31.77	■■■□□ 2.68
EEF1D-225	ENST00000529272	AFAP1	Q8N556	730 aa		31.77	■■■□□ 2.68
EEF1D-225	ENST00000529272	ZNF518A	Q6AHZ1	1483 aa		31.75	■■■□□ 2.67
EEF1D-225	ENST00000529272	KDM5C	P41229	1560 aa		31.74	■■■□□ 2.67
EEF1D-225	ENST00000529272	LMTK3	Q96Q04	1460 aa		31.73	■■■□□ 2.67
EEF1D-225	ENST00000529272	MLEC	Q14165	292 aa		31.73	■■■□□ 2.67
EEF1D-225	ENST00000529272	C9orf84	Q5VXU9	1444 aa		31.72	■■■□□ 2.67
EEF1D-225	ENST00000529272	PREX2	Q70Z35	1606 aa		31.7	■■■□□ 2.67
EEF1D-225	ENST00000529272	FER1L4	A9Z1Z3	1794 aa		31.68	■■■□□ 2.66
EEF1D-225	ENST00000529272	ARHGEF12	Q9NZN5	1544 aa		31.67	■■■□□ 2.66
EEF1D-225	ENST00000529272	CDC42BPA	Q5VT25	1732 aa		31.66	■■■□□ 2.66
EEF1D-225	ENST00000529272	MLH3	Q9UHC1	1453 aa		31.63	■■■□□ 2.65
EEF1D-225	ENST00000529272	TRAPPC8	Q9Y2L5	1435 aa		31.63	■■■□□ 2.65
EEF1D-225	ENST00000529272	ABCC1	P33527	1531 aa		31.63	■■■□□ 2.65
EEF1D-225	ENST00000529272	DIP2C	Q9Y2E4	1556 aa		31.61	■■■□□ 2.65
EEF1D-225	ENST00000529272	PLPPR3	Q6T4P5	718 aa		31.61	■■■□□ 2.65
EEF1D-225	ENST00000529272	ITSN2	Q9NZM3	1697 aa		31.6	■■■□□ 2.65
EEF1D-225	ENST00000529272	RERE	Q9P2R6	1566 aa		31.58	■■■□□ 2.65
EEF1D-225	ENST00000529272	ABCA6	Q8N139	1617 aa		31.56	■■■□□ 2.64
EEF1D-225	ENST00000529272	HSPA2	P54652	639 aa		31.55	■■■□□ 2.64
EEF1D-225	ENST00000529272	MYT1L	Q9UL68	1186 aa		31.55	■■■□□ 2.64
EEF1D-225	ENST00000529272	GPATCH8	Q9UKJ3	1502 aa	Known RBP	31.55	■■■□□ 2.64
EEF1D-225	ENST00000529272	KIDINS220	Q9ULH0	1771 aa		31.53	■■■□□ 2.64
EEF1D-225	ENST00000529272	CEBPA	P49715	358 aa	Predicted RBP	31.51	■■■□□ 2.64
EEF1D-225	ENST00000529272	SAMD9L	Q8IVG5	1584 aa		31.49	■■■□□ 2.63
EEF1D-225	ENST00000529272	AGL	P35573	1532 aa		31.49	■■■□□ 2.63
EEF1D-225	ENST00000529272	TIAM1	Q13009	1591 aa		31.48	■■■□□ 2.63
EEF1D-225	ENST00000529272	SETD1B	Q9UPS6	1966 aa	Known RBP	31.48	■■■□□ 2.63
EEF1D-225	ENST00000529272	ZNF777	Q9ULD5	760 aa	Predicted RBP	31.48	■■■□□ 2.63
EEF1D-225	ENST00000529272	MAP3K1	Q13233	1512 aa		31.44	■■■□□ 2.62
EEF1D-225	ENST00000529272	HNRNPM	P52272	730 aa	Known RBP eCLIP	31.44	■■■□□ 2.62	2e-7	■■■■□ 20.7
EEF1D-225	ENST00000529272	FBXO41	Q8TF61	875 aa		31.43	■■■□□ 2.62
EEF1D-225	ENST00000529272	PREX1	Q8TCU6	1659 aa		31.42	■■■□□ 2.62
EEF1D-225	ENST00000529272	SYCP2	Q9BX26	1530 aa		31.41	■■■□□ 2.62
EEF1D-225	ENST00000529272	KIAA1107	Q9UPP5	1409 aa		31.4	■■■□□ 2.62
EEF1D-225	ENST00000529272	CFDP1	Q9UEE9	299 aa	Predicted RBP	31.4	■■■□□ 2.62
EEF1D-225	ENST00000529272	MTUS2	Q5JR59	1369 aa		31.39	■■■□□ 2.62
EEF1D-225	ENST00000529272	CCNB3	Q8WWL7	1395 aa		31.39	■■■□□ 2.62
EEF1D-225	ENST00000529272	C3	P01024	1663 aa		31.36	■■■□□ 2.61
EEF1D-225	ENST00000529272	SPAG9	O60271	1321 aa	Known RBP	31.35	■■■□□ 2.61
EEF1D-225	ENST00000529272	APLP2	Q06481	763 aa		31.35	■■■□□ 2.61
EEF1D-225	ENST00000529272	EHBP1L1	Q8N3D4	1523 aa		31.34	■■■□□ 2.61
EEF1D-225	ENST00000529272	PLEKHH2	Q8IVE3	1493 aa		31.33	■■■□□ 2.61
EEF1D-225	ENST00000529272	LRRC9	Q6ZRR7	1453 aa		31.3	■■■□□ 2.6
EEF1D-225	ENST00000529272	ZNF644	Q9H582	1327 aa	Predicted RBP	31.29	■■■□□ 2.6
EEF1D-225	ENST00000529272	STRC	Q7RTU9	1775 aa		31.28	■■■□□ 2.6
EEF1D-225	ENST00000529272	ATP7A	Q04656	1500 aa		31.28	■■■□□ 2.6
EEF1D-225	ENST00000529272	INO80	Q9ULG1	1556 aa	Predicted RBP	31.28	■■■□□ 2.6
EEF1D-225	ENST00000529272	ESF1	Q9H501	851 aa	Known RBP	31.27	■■■□□ 2.6
EEF1D-225	ENST00000529272	SUPT6H	Q7KZ85	1726 aa	Known RBP	31.27	■■■□□ 2.6
EEF1D-225	ENST00000529272	UHRF1BP1	Q6BDS2	1440 aa		31.26	■■■□□ 2.6
EEF1D-225	ENST00000529272	CNTLN	Q9NXG0	1405 aa		31.24	■■■□□ 2.59
EEF1D-225	ENST00000529272	MBD5	Q9P267	1494 aa		31.24	■■■□□ 2.59
EEF1D-225	ENST00000529272	PLXNC1	O60486	1568 aa		31.22	■■■□□ 2.59
EEF1D-225	ENST00000529272	KANK4	Q5T7N3	995 aa	Predicted RBP	31.22	■■■□□ 2.59
EEF1D-225	ENST00000529272	A2M	P01023	1474 aa		31.21	■■■□□ 2.59
EEF1D-225	ENST00000529272	MROH2A	A6NES4	1674 aa		31.2	■■■□□ 2.58
EEF1D-225	ENST00000529272	ZMYM3	Q14202	1370 aa		31.18	■■■□□ 2.58
EEF1D-225	ENST00000529272	CERK	Q8TCT0	537 aa		31.17	■■■□□ 2.58
EEF1D-225	ENST00000529272	DMRT2	Q9Y5R5	561 aa		31.15	■■■□□ 2.58
EEF1D-225	ENST00000529272	ADGB	Q8N7X0	1667 aa		31.14	■■■□□ 2.58
EEF1D-225	ENST00000529272	RTEL1-TNFRSF6B	F6WH68	1400 aa		31.13	■■■□□ 2.57
EEF1D-225	ENST00000529272	NCOA2	Q15596	1464 aa		31.13	■■■□□ 2.57
EEF1D-225	ENST00000529272	NPAT	Q14207	1427 aa		31.12	■■■□□ 2.57
EEF1D-225	ENST00000529272	CLTC	Q00610	1675 aa	Known RBP	31.1	■■■□□ 2.57
EEF1D-225	ENST00000529272	GGT6	Q6P531	493 aa		31.09	■■■□□ 2.57
EEF1D-225	ENST00000529272	PPP6R1	Q9UPN7	881 aa		31.08	■■■□□ 2.57
EEF1D-225	ENST00000529272	PTPRT	O14522	1441 aa		31.06	■■■□□ 2.56
EEF1D-225	ENST00000529272	RSPH4A	Q5TD94	716 aa		31.05	■■■□□ 2.56
EEF1D-225	ENST00000529272	DHX29	Q7Z478	1369 aa	Known RBP	31.05	■■■□□ 2.56
EEF1D-225	ENST00000529272	CAMSAP2	Q08AD1	1489 aa		31.03	■■■□□ 2.56
EEF1D-225	ENST00000529272	PTPRK	Q15262	1439 aa		31.01	■■■□□ 2.56
EEF1D-225	ENST00000529272	CCDC141	Q6ZP82	1450 aa		31.01	■■■□□ 2.55
EEF1D-225	ENST00000529272	NCOA1	Q15788	1441 aa		31	■■■□□ 2.55
EEF1D-225	ENST00000529272	PPARGC1B	Q86YN6	1023 aa	Known RBP	30.98	■■■□□ 2.55
EEF1D-225	ENST00000529272	CAMSAP1	Q5T5Y3	1602 aa		30.96	■■■□□ 2.55
EEF1D-225	ENST00000529272	ARHGEF5	Q12774	1597 aa		30.95	■■■□□ 2.54
EEF1D-225	ENST00000529272	KIF3B	O15066	747 aa		30.93	■■■□□ 2.54
EEF1D-225	ENST00000529272	ZNF142	P52746	1687 aa	Predicted RBP	30.92	■■■□□ 2.54
EEF1D-225	ENST00000529272	MYOM3	Q5VTT5	1437 aa		30.92	■■■□□ 2.54
EEF1D-225	ENST00000529272	MYO3A	Q8NEV4	1616 aa		30.92	■■■□□ 2.54
EEF1D-225	ENST00000529272	TSPY4	P0CV99	314 aa		30.89	■■■□□ 2.54
EEF1D-225	ENST00000529272	TSPY10	P0CW01	314 aa		30.89	■■■□□ 2.54

Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms