RNA–Protein interactions for RNA: ENST00000528935.1

PACS1-207, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

TSL 4

Gene PACS1, Length 846 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-207ENST00000528935 ARHGEF40Q8TER5 1519 aa23.39■■□□□ 1.34
PACS1-207ENST00000528935 ARID4BQ4LE39 1312 aaPredicted RBP23.39■■□□□ 1.34
PACS1-207ENST00000528935 MAGI2Q86UL8 1455 aa23.39■■□□□ 1.34
PACS1-207ENST00000528935 CEP162Q5TB80 1403 aa23.38■■□□□ 1.33
PACS1-207ENST00000528935 ZFYVE16Q7Z3T8 1539 aa23.36■■□□□ 1.33
PACS1-207ENST00000528935 YEATS2Q9ULM3 1422 aa23.34■■□□□ 1.33
PACS1-207ENST00000528935 ADAMTSL3P82987 1691 aa23.34■■□□□ 1.33
PACS1-207ENST00000528935 CDC42BPBQ9Y5S2 1711 aa23.32■■□□□ 1.32
PACS1-207ENST00000528935 BCORL1Q5H9F3 1711 aa23.31■■□□□ 1.32
PACS1-207ENST00000528935 PREX2Q70Z35 1606 aa23.31■■□□□ 1.32
PACS1-207ENST00000528935 LOC105371045A0A1W2PR82 267 aa23.31■■□□□ 1.32
PACS1-207ENST00000528935 ZNF518AQ6AHZ1 1483 aa23.3■■□□□ 1.32
PACS1-207ENST00000528935 AFAP1Q8N556 730 aa23.3■■□□□ 1.32
PACS1-207ENST00000528935 PTPRMP28827 1452 aa23.27■■□□□ 1.32
PACS1-207ENST00000528935 ATP10AO60312 1499 aa23.26■■□□□ 1.31
PACS1-207ENST00000528935 MTUS2Q5JR59 1369 aa23.26■■□□□ 1.31
PACS1-207ENST00000528935 CDC42BPAQ5VT25 1732 aa23.25■■□□□ 1.31
PACS1-207ENST00000528935 KDM5CP41229 1560 aa23.25■■□□□ 1.31
PACS1-207ENST00000528935 GPATCH8Q9UKJ3 1502 aaKnown RBP23.24■■□□□ 1.31
PACS1-207ENST00000528935 ABCC1P33527 1531 aa23.23■■□□□ 1.31
PACS1-207ENST00000528935 MADDQ8WXG6 1647 aa23.23■■□□□ 1.31
PACS1-207ENST00000528935 ARHGEF12Q9NZN5 1544 aa23.23■■□□□ 1.31
PACS1-207ENST00000528935 MYT1LQ9UL68 1186 aa23.22■■□□□ 1.31
PACS1-207ENST00000528935 C9orf84Q5VXU9 1444 aa23.22■■□□□ 1.31
PACS1-207ENST00000528935 HECW2Q9P2P5 1572 aa23.22■■□□□ 1.31
PACS1-207ENST00000528935 SIGLEC1Q9BZZ2 1709 aa23.22■■□□□ 1.31
PACS1-207ENST00000528935 ZNF777Q9ULD5 760 aaPredicted RBP23.21■■□□□ 1.31
PACS1-207ENST00000528935 TRAPPC8Q9Y2L5 1435 aa23.21■■□□□ 1.31
PACS1-207ENST00000528935 CCNB3Q8WWL7 1395 aa23.2■■□□□ 1.3
PACS1-207ENST00000528935 MLH3Q9UHC1 1453 aa23.19■■□□□ 1.3
PACS1-207ENST00000528935 CFDP1Q9UEE9 299 aaPredicted RBP23.19■■□□□ 1.3
PACS1-207ENST00000528935 MLECQ14165 292 aa23.18■■□□□ 1.3
PACS1-207ENST00000528935 ITSN2Q9NZM3 1697 aa23.18■■□□□ 1.3
PACS1-207ENST00000528935 EHBP1L1Q8N3D4 1523 aa23.17■■□□□ 1.3
PACS1-207ENST00000528935 SAMD9LQ8IVG5 1584 aa23.15■■□□□ 1.3
PACS1-207ENST00000528935 RIMS1Q86UR5 1692 aaKnown RBP23.15■■□□□ 1.3
PACS1-207ENST00000528935 DIP2CQ9Y2E4 1556 aa23.14■■□□□ 1.29
PACS1-207ENST00000528935 HNRNPMP52272 730 aaKnown RBP eCLIP23.13■■□□□ 1.29
PACS1-207ENST00000528935 VPS8Q8N3P4 1428 aa23.13■■□□□ 1.29
PACS1-207ENST00000528935 KIAA1107Q9UPP5 1409 aa23.13■■□□□ 1.29
PACS1-207ENST00000528935 PLEKHH2Q8IVE3 1493 aa23.12■■□□□ 1.29
PACS1-207ENST00000528935 SYCP2Q9BX26 1530 aa23.11■■□□□ 1.29
PACS1-207ENST00000528935 REREQ9P2R6 1566 aa23.1■■□□□ 1.29
PACS1-207ENST00000528935 ABCA6Q8N139 1617 aa23.1■■□□□ 1.29
PACS1-207ENST00000528935 TIAM1Q13009 1591 aa23.09■■□□□ 1.29
PACS1-207ENST00000528935 SPAG9O60271 1321 aaKnown RBP23.08■■□□□ 1.28
PACS1-207ENST00000528935 KIDINS220Q9ULH0 1771 aa23.07■■□□□ 1.28
PACS1-207ENST00000528935 FER1L4A9Z1Z3 1794 aa23.06■■□□□ 1.28
PACS1-207ENST00000528935 PLPPR3Q6T4P5 718 aa23.06■■□□□ 1.28
PACS1-207ENST00000528935 ZNF644Q9H582 1327 aaPredicted RBP23.05■■□□□ 1.28
PACS1-207ENST00000528935 AGLP35573 1532 aa23.04■■□□□ 1.28
PACS1-207ENST00000528935 NCOA2Q15596 1464 aa23.04■■□□□ 1.28
PACS1-207ENST00000528935 SUPT6HQ7KZ85 1726 aaKnown RBP23.02■■□□□ 1.28
PACS1-207ENST00000528935 LRRC9Q6ZRR7 1453 aa23■■□□□ 1.27
PACS1-207ENST00000528935 LMTK3Q96Q04 1460 aa23■■□□□ 1.27
PACS1-207ENST00000528935 MBD5Q9P267 1494 aa22.99■■□□□ 1.27
PACS1-207ENST00000528935 ATP7AQ04656 1500 aa22.99■■□□□ 1.27
PACS1-207ENST00000528935 MAP3K1Q13233 1512 aa22.99■■□□□ 1.27
PACS1-207ENST00000528935 CEBPAP49715 358 aaPredicted RBP22.97■■□□□ 1.27
PACS1-207ENST00000528935 INO80Q9ULG1 1556 aaPredicted RBP22.97■■□□□ 1.27
PACS1-207ENST00000528935 ESF1Q9H501 851 aaKnown RBP22.96■■□□□ 1.27
PACS1-207ENST00000528935 KANK4Q5T7N3 995 aaPredicted RBP22.95■■□□□ 1.26
PACS1-207ENST00000528935 RSPH4AQ5TD94 716 aa22.93■■□□□ 1.26
PACS1-207ENST00000528935 A2MP01023 1474 aa22.92■■□□□ 1.26
PACS1-207ENST00000528935 CAMSAP2Q08AD1 1489 aa22.92■■□□□ 1.26
PACS1-207ENST00000528935 RTEL1-TNFRSF6BF6WH68 1400 aa22.91■■□□□ 1.26
PACS1-207ENST00000528935 HSPA2P54652 639 aa22.9■■□□□ 1.26
PACS1-207ENST00000528935 CNTLNQ9NXG0 1405 aa22.89■■□□□ 1.25
PACS1-207ENST00000528935 PLXNC1O60486 1568 aa22.89■■□□□ 1.25
PACS1-207ENST00000528935 CCDC141Q6ZP82 1450 aa22.88■■□□□ 1.25
PACS1-207ENST00000528935 APLP2Q06481 763 aa22.88■■□□□ 1.25
PACS1-207ENST00000528935 ADGBQ8N7X0 1667 aa22.86■■□□□ 1.25
PACS1-207ENST00000528935 C3P01024 1663 aa22.84■■□□□ 1.25
PACS1-207ENST00000528935 PREX1Q8TCU6 1659 aa22.84■■□□□ 1.25
PACS1-207ENST00000528935 TSPY4P0CV99 314 aa22.83■■□□□ 1.25
PACS1-207ENST00000528935 TSPY10P0CW01 314 aa22.83■■□□□ 1.25
PACS1-207ENST00000528935 DHX29Q7Z478 1369 aaKnown RBP22.83■■□□□ 1.25
PACS1-207ENST00000528935 ARHGEF5Q12774 1597 aa22.83■■□□□ 1.25
PACS1-207ENST00000528935 MYOM3Q5VTT5 1437 aa22.82■■□□□ 1.24
PACS1-207ENST00000528935 MIA2Q96PC5 1412 aa22.82■■□□□ 1.24
PACS1-207ENST00000528935 SETD1BQ9UPS6 1966 aaKnown RBP22.82■■□□□ 1.24
PACS1-207ENST00000528935 GGT6Q6P531 493 aa22.82■■□□□ 1.24
PACS1-207ENST00000528935 PPP6R1Q9UPN7 881 aa22.81■■□□□ 1.24
PACS1-207ENST00000528935 UHRF1BP1Q6BDS2 1440 aa22.81■■□□□ 1.24
PACS1-207ENST00000528935 ZMYM3Q14202 1370 aa22.8■■□□□ 1.24
PACS1-207ENST00000528935 MROH2AA6NES4 1674 aa22.78■■□□□ 1.24
PACS1-207ENST00000528935 ILDR1Q86SU0 546 aaPredicted RBP22.77■■□□□ 1.24
PACS1-207ENST00000528935 NPATQ14207 1427 aa22.74■■□□□ 1.23
PACS1-207ENST00000528935 KIF3BO15066 747 aa22.74■■□□□ 1.23
PACS1-207ENST00000528935 CLTCQ00610 1675 aaKnown RBP22.74■■□□□ 1.23
PACS1-207ENST00000528935 MAST1Q9Y2H9 1570 aa22.71■■□□□ 1.23
PACS1-207ENST00000528935 PTPRKQ15262 1439 aa22.68■■□□□ 1.22
PACS1-207ENST00000528935 DMRT2Q9Y5R5 561 aa22.68■■□□□ 1.22
PACS1-207ENST00000528935 PTPN23Q9H3S7 1636 aa22.65■■□□□ 1.22
PACS1-207ENST00000528935 FGD6Q6ZV73 1430 aa22.65■■□□□ 1.22
PACS1-207ENST00000528935 WASHC2CQ9Y4E1 1318 aa22.64■■□□□ 1.22
PACS1-207ENST00000528935 FAM135AQ9P2D6 1515 aa22.64■■□□□ 1.21
PACS1-207ENST00000528935 STRCQ7RTU9 1775 aa22.63■■□□□ 1.21
PACS1-207ENST00000528935 ABCC5O15440 1437 aa22.63■■□□□ 1.21
PACS1-207ENST00000528935 KDM5DQ9BY66 1539 aa22.62■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms