RNA–Protein interactions for RNA: ENST00000528599.1

TRAF3IP2-211, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best)

Gene TRAF3IP2, Length 1,663 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-211ENST00000528599 PREX2Q70Z35 1606 aa18.71■□□□□ 0.59
TRAF3IP2-211ENST00000528599 CDC42BPBQ9Y5S2 1711 aa18.7■□□□□ 0.58
TRAF3IP2-211ENST00000528599 ITSN2Q9NZM3 1697 aa18.7■□□□□ 0.58
TRAF3IP2-211ENST00000528599 FANCAO15360 1455 aa18.69■□□□□ 0.58
TRAF3IP2-211ENST00000528599 CFDP1Q9UEE9 299 aaPredicted RBP18.69■□□□□ 0.58
TRAF3IP2-211ENST00000528599 NEO1Q92859 1461 aa18.69■□□□□ 0.58
TRAF3IP2-211ENST00000528599 FGD6Q6ZV73 1430 aa18.68■□□□□ 0.58
TRAF3IP2-211ENST00000528599 ARHGAP5Q13017 1502 aa18.67■□□□□ 0.58
TRAF3IP2-211ENST00000528599 ARAP3Q8WWN8 1544 aa18.67■□□□□ 0.58
TRAF3IP2-211ENST00000528599 MIA2Q96PC5 1412 aa18.67■□□□□ 0.58
TRAF3IP2-211ENST00000528599 EFCAB2Q5VUJ9 269 aa18.65■□□□□ 0.58
TRAF3IP2-211ENST00000528599 ZNF777Q9ULD5 760 aaPredicted RBP18.65■□□□□ 0.58
TRAF3IP2-211ENST00000528599 ZNF644Q9H582 1327 aaPredicted RBP18.65■□□□□ 0.58
TRAF3IP2-211ENST00000528599 FRMPD1Q5SYB0 1578 aa18.65■□□□□ 0.58
TRAF3IP2-211ENST00000528599 AKNAQ7Z591 1439 aa18.64■□□□□ 0.57
TRAF3IP2-211ENST00000528599 CFAP74Q9C0B2 1584 aa18.63■□□□□ 0.57
TRAF3IP2-211ENST00000528599 RRBP1Q9P2E9 1410 aaKnown RBP18.63■□□□□ 0.57
TRAF3IP2-211ENST00000528599 PTPN23Q9H3S7 1636 aa18.62■□□□□ 0.57
TRAF3IP2-211ENST00000528599 SAMD9LQ8IVG5 1584 aa18.62■□□□□ 0.57
TRAF3IP2-211ENST00000528599 RAPGEF3O95398 923 aa18.61■□□□□ 0.57
TRAF3IP2-211ENST00000528599 TCOF1Q13428 1488 aaKnown RBP18.61■□□□□ 0.57
TRAF3IP2-211ENST00000528599 CAMSAP2Q08AD1 1489 aa18.6■□□□□ 0.57
TRAF3IP2-211ENST00000528599 RICTORQ6R327 1708 aa18.6■□□□□ 0.57
TRAF3IP2-211ENST00000528599 AEBP2Q6ZN18 517 aaPredicted RBP18.6■□□□□ 0.57
TRAF3IP2-211ENST00000528599 FAM50AQ14320 339 aaKnown RBP18.59■□□□□ 0.57
TRAF3IP2-211ENST00000528599 ADGRL1O94910 1474 aa18.59■□□□□ 0.57
TRAF3IP2-211ENST00000528599 ABCC1P33527 1531 aa18.56■□□□□ 0.56
TRAF3IP2-211ENST00000528599 ARHGEF12Q9NZN5 1544 aa18.56■□□□□ 0.56
TRAF3IP2-211ENST00000528599 DENND4BO75064 1496 aaPredicted RBP18.56■□□□□ 0.56
TRAF3IP2-211ENST00000528599 SCAPERQ9BY12 1400 aa18.55■□□□□ 0.56
TRAF3IP2-211ENST00000528599 HNRNPMP52272 730 aaKnown RBP eCLIP18.55■□□□□ 0.56
TRAF3IP2-211ENST00000528599 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.55■□□□□ 0.56
TRAF3IP2-211ENST00000528599 KIAA1107Q9UPP5 1409 aa18.55■□□□□ 0.56
TRAF3IP2-211ENST00000528599 PLEKHH2Q8IVE3 1493 aa18.54■□□□□ 0.56
TRAF3IP2-211ENST00000528599 SYCP2Q9BX26 1530 aa18.54■□□□□ 0.56
TRAF3IP2-211ENST00000528599 MBD5Q9P267 1494 aa18.54■□□□□ 0.56
TRAF3IP2-211ENST00000528599 POGZQ7Z3K3 1410 aa18.53■□□□□ 0.56
TRAF3IP2-211ENST00000528599 TRIM26Q12899 539 aaPredicted RBP18.51■□□□□ 0.55
TRAF3IP2-211ENST00000528599 TRAPPC8Q9Y2L5 1435 aa18.5■□□□□ 0.55
TRAF3IP2-211ENST00000528599 ZMYM4Q5VZL5 1548 aa18.49■□□□□ 0.55
TRAF3IP2-211ENST00000528599 ARHGEF5Q12774 1597 aa18.49■□□□□ 0.55
TRAF3IP2-211ENST00000528599 ABCC5O15440 1437 aa18.48■□□□□ 0.55
TRAF3IP2-211ENST00000528599 ITGAEP38570 1179 aa18.48■□□□□ 0.55
TRAF3IP2-211ENST00000528599 KDM5CP41229 1560 aa18.48■□□□□ 0.55
TRAF3IP2-211ENST00000528599 DNMT1P26358 1616 aaKnown RBP18.48■□□□□ 0.55
TRAF3IP2-211ENST00000528599 DAPK1P53355 1430 aa18.48■□□□□ 0.55
TRAF3IP2-211ENST00000528599 AFAP1Q8N556 730 aa18.47■□□□□ 0.55
TRAF3IP2-211ENST00000528599 PTPRKQ15262 1439 aa18.46■□□□□ 0.55
TRAF3IP2-211ENST00000528599 YEATS2Q9ULM3 1422 aa18.46■□□□□ 0.55
TRAF3IP2-211ENST00000528599 ZNF518AQ6AHZ1 1483 aa18.46■□□□□ 0.55
TRAF3IP2-211ENST00000528599 CCDC141Q6ZP82 1450 aa18.46■□□□□ 0.55
TRAF3IP2-211ENST00000528599 RSPH4AQ5TD94 716 aa18.45■□□□□ 0.54
TRAF3IP2-211ENST00000528599 ARHGEF40Q8TER5 1519 aa18.45■□□□□ 0.54
TRAF3IP2-211ENST00000528599 SIGLEC1Q9BZZ2 1709 aa18.44■□□□□ 0.54
TRAF3IP2-211ENST00000528599 CROCC2H7BZ55 1655 aa18.43■□□□□ 0.54
TRAF3IP2-211ENST00000528599 ZFYVE16Q7Z3T8 1539 aa18.42■□□□□ 0.54
TRAF3IP2-211ENST00000528599 CHIC2Q9UKJ5 165 aa18.41■□□□□ 0.54
TRAF3IP2-211ENST00000528599 HECW2Q9P2P5 1572 aa18.41■□□□□ 0.54
TRAF3IP2-211ENST00000528599 TSPY4P0CV99 314 aa18.41■□□□□ 0.54
TRAF3IP2-211ENST00000528599 TSPY10P0CW01 314 aa18.41■□□□□ 0.54
TRAF3IP2-211ENST00000528599 SHANK2Q9UPX8 1470 aa18.4■□□□□ 0.54
TRAF3IP2-211ENST00000528599 MAGI2Q86UL8 1455 aa18.4■□□□□ 0.54
TRAF3IP2-211ENST00000528599 C9orf84Q5VXU9 1444 aa18.4■□□□□ 0.54
TRAF3IP2-211ENST00000528599 SPAG9O60271 1321 aaKnown RBP18.39■□□□□ 0.53
TRAF3IP2-211ENST00000528599 KIDINS220Q9ULH0 1771 aa18.39■□□□□ 0.53
TRAF3IP2-211ENST00000528599 MLH3Q9UHC1 1453 aa18.38■□□□□ 0.53
TRAF3IP2-211ENST00000528599 ABCA6Q8N139 1617 aa18.38■□□□□ 0.53
TRAF3IP2-211ENST00000528599 MAST1Q9Y2H9 1570 aa18.38■□□□□ 0.53
TRAF3IP2-211ENST00000528599 DIP2CQ9Y2E4 1556 aa18.37■□□□□ 0.53
TRAF3IP2-211ENST00000528599 KDM4FA0A1W2PPD8 638 aa18.37■□□□□ 0.53
TRAF3IP2-211ENST00000528599 PCGF6Q9BYE7 350 aa18.36■□□□□ 0.53
TRAF3IP2-211ENST00000528599 INO80Q9ULG1 1556 aaPredicted RBP18.36■□□□□ 0.53
TRAF3IP2-211ENST00000528599 RTEL1-TNFRSF6BF6WH68 1400 aa18.35■□□□□ 0.53
TRAF3IP2-211ENST00000528599 ATP7AQ04656 1500 aa18.35■□□□□ 0.53
TRAF3IP2-211ENST00000528599 ADGRL2O95490 1459 aa18.34■□□□□ 0.53
TRAF3IP2-211ENST00000528599 NCOA1Q15788 1441 aa18.34■□□□□ 0.53
TRAF3IP2-211ENST00000528599 ADGBQ8N7X0 1667 aa18.33■□□□□ 0.53
TRAF3IP2-211ENST00000528599 ROCK1Q13464 1354 aa18.33■□□□□ 0.52
TRAF3IP2-211ENST00000528599 RRP7BPQ9NSQ0 103 aa18.33■□□□□ 0.52
TRAF3IP2-211ENST00000528599 MYT1LQ9UL68 1186 aa18.33■□□□□ 0.52
TRAF3IP2-211ENST00000528599 ANKRD30AQ9BXX3 1397 aa18.32■□□□□ 0.52
TRAF3IP2-211ENST00000528599 ATP10AO60312 1499 aa18.32■□□□□ 0.52
TRAF3IP2-211ENST00000528599 PLXNC1O60486 1568 aa18.3■□□□□ 0.52
TRAF3IP2-211ENST00000528599 BCORL1Q5H9F3 1711 aa18.29■□□□□ 0.52
TRAF3IP2-211ENST00000528599 KIF15Q9NS87 1388 aa18.28■□□□□ 0.52
TRAF3IP2-211ENST00000528599 NAIPQ13075 1403 aa18.28■□□□□ 0.52
TRAF3IP2-211ENST00000528599 REREQ9P2R6 1566 aa18.28■□□□□ 0.52
TRAF3IP2-211ENST00000528599 HFM1A2PYH4 1435 aa18.27■□□□□ 0.52
TRAF3IP2-211ENST00000528599 ADAMTSL3P82987 1691 aa18.26■□□□□ 0.51
TRAF3IP2-211ENST00000528599 ARID4BQ4LE39 1312 aaPredicted RBP18.25■□□□□ 0.51
TRAF3IP2-211ENST00000528599 GCC2Q8IWJ2 1684 aa18.23■□□□□ 0.51
TRAF3IP2-211ENST00000528599 DUOX2Q9NRD8 1548 aa18.23■□□□□ 0.51
TRAF3IP2-211ENST00000528599 MADDQ8WXG6 1647 aa18.23■□□□□ 0.51
TRAF3IP2-211ENST00000528599 A2MP01023 1474 aa18.23■□□□□ 0.51
TRAF3IP2-211ENST00000528599 SETD5Q9C0A6 1442 aa18.23■□□□□ 0.51
TRAF3IP2-211ENST00000528599 DHX29Q7Z478 1369 aaKnown RBP18.22■□□□□ 0.51
TRAF3IP2-211ENST00000528599 ANKRD50Q9ULJ7 1429 aa18.21■□□□□ 0.51
TRAF3IP2-211ENST00000528599 AGLP35573 1532 aa18.2■□□□□ 0.5
TRAF3IP2-211ENST00000528599 MLECQ14165 292 aa18.2■□□□□ 0.5
TRAF3IP2-211ENST00000528599 ERBINQ96RT1 1412 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms