RNA–Protein interactions for RNA: ENST00000528436.1

CTSH-206, Transcript of cathepsin H, human

TSL 3

Gene CTSH, Length 268 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTSH-206	ENST00000528436	MAGI2	Q86UL8	1455 aa		29.35	■■■□□ 2.29
CTSH-206	ENST00000528436	ARHGAP5	Q13017	1502 aa		29.34	■■■□□ 2.29
CTSH-206	ENST00000528436	ZMYM4	Q5VZL5	1548 aa		29.34	■■■□□ 2.29
CTSH-206	ENST00000528436	ARHGEF40	Q8TER5	1519 aa		29.34	■■■□□ 2.29
CTSH-206	ENST00000528436	AFAP1	Q8N556	730 aa		29.32	■■■□□ 2.28
CTSH-206	ENST00000528436	ZFYVE16	Q7Z3T8	1539 aa		29.31	■■■□□ 2.28
CTSH-206	ENST00000528436	ADAMTSL3	P82987	1691 aa		29.31	■■■□□ 2.28
CTSH-206	ENST00000528436	PTPRM	P28827	1452 aa		29.29	■■■□□ 2.28
CTSH-206	ENST00000528436	MYT1L	Q9UL68	1186 aa		29.27	■■■□□ 2.28
CTSH-206	ENST00000528436	BCORL1	Q5H9F3	1711 aa		29.27	■■■□□ 2.28
CTSH-206	ENST00000528436	HECW2	Q9P2P5	1572 aa		29.26	■■■□□ 2.27
CTSH-206	ENST00000528436	MLEC	Q14165	292 aa		29.25	■■■□□ 2.27
CTSH-206	ENST00000528436	ZNF518A	Q6AHZ1	1483 aa		29.23	■■■□□ 2.27
CTSH-206	ENST00000528436	ATP10A	O60312	1499 aa		29.23	■■■□□ 2.27
CTSH-206	ENST00000528436	CEP162	Q5TB80	1403 aa		29.21	■■■□□ 2.27
CTSH-206	ENST00000528436	LOC105371045	A0A1W2PR82	267 aa		29.2	■■■□□ 2.26
CTSH-206	ENST00000528436	ZNF777	Q9ULD5	760 aa	Predicted RBP	29.2	■■■□□ 2.26
CTSH-206	ENST00000528436	CDC42BPB	Q9Y5S2	1711 aa		29.2	■■■□□ 2.26
CTSH-206	ENST00000528436	MADD	Q8WXG6	1647 aa		29.19	■■■□□ 2.26
CTSH-206	ENST00000528436	MTUS2	Q5JR59	1369 aa		29.16	■■■□□ 2.26
CTSH-206	ENST00000528436	PLPPR3	Q6T4P5	718 aa		29.16	■■■□□ 2.26
CTSH-206	ENST00000528436	C9orf84	Q5VXU9	1444 aa		29.16	■■■□□ 2.26
CTSH-206	ENST00000528436	PREX2	Q70Z35	1606 aa		29.16	■■■□□ 2.26
CTSH-206	ENST00000528436	TRAPPC8	Q9Y2L5	1435 aa		29.14	■■■□□ 2.26
CTSH-206	ENST00000528436	ARHGEF12	Q9NZN5	1544 aa		29.13	■■■□□ 2.25
CTSH-206	ENST00000528436	SIGLEC1	Q9BZZ2	1709 aa		29.12	■■■□□ 2.25
CTSH-206	ENST00000528436	GPATCH8	Q9UKJ3	1502 aa	Known RBP	29.12	■■■□□ 2.25
CTSH-206	ENST00000528436	CFDP1	Q9UEE9	299 aa	Predicted RBP	29.12	■■■□□ 2.25
CTSH-206	ENST00000528436	KDM5C	P41229	1560 aa		29.12	■■■□□ 2.25
CTSH-206	ENST00000528436	CCNB3	Q8WWL7	1395 aa		29.1	■■■□□ 2.25
CTSH-206	ENST00000528436	HNRNPM	P52272	730 aa	Known RBP eCLIP	29.09	■■■□□ 2.25
CTSH-206	ENST00000528436	MLH3	Q9UHC1	1453 aa		29.09	■■■□□ 2.25
CTSH-206	ENST00000528436	ABCC1	P33527	1531 aa		29.09	■■■□□ 2.25
CTSH-206	ENST00000528436	RIMS1	Q86UR5	1692 aa	Known RBP	29.09	■■■□□ 2.25
CTSH-206	ENST00000528436	CDC42BPA	Q5VT25	1732 aa		29.08	■■■□□ 2.25
CTSH-206	ENST00000528436	ITSN2	Q9NZM3	1697 aa		29	■■■□□ 2.23
CTSH-206	ENST00000528436	DIP2C	Q9Y2E4	1556 aa		29	■■■□□ 2.23
CTSH-206	ENST00000528436	SPAG9	O60271	1321 aa	Known RBP	28.99	■■■□□ 2.23
CTSH-206	ENST00000528436	SAMD9L	Q8IVG5	1584 aa		28.99	■■■□□ 2.23
CTSH-206	ENST00000528436	KIAA1107	Q9UPP5	1409 aa		28.98	■■■□□ 2.23
CTSH-206	ENST00000528436	CEBPA	P49715	358 aa	Predicted RBP	28.97	■■■□□ 2.23
CTSH-206	ENST00000528436	PLEKHH2	Q8IVE3	1493 aa		28.96	■■■□□ 2.23
CTSH-206	ENST00000528436	SYCP2	Q9BX26	1530 aa		28.95	■■■□□ 2.23
CTSH-206	ENST00000528436	LMTK3	Q96Q04	1460 aa		28.95	■■■□□ 2.22
CTSH-206	ENST00000528436	ZNF644	Q9H582	1327 aa	Predicted RBP	28.94	■■■□□ 2.22
CTSH-206	ENST00000528436	EHBP1L1	Q8N3D4	1523 aa		28.94	■■■□□ 2.22
CTSH-206	ENST00000528436	ABCA6	Q8N139	1617 aa		28.94	■■■□□ 2.22
CTSH-206	ENST00000528436	FER1L4	A9Z1Z3	1794 aa		28.93	■■■□□ 2.22
CTSH-206	ENST00000528436	RERE	Q9P2R6	1566 aa		28.93	■■■□□ 2.22
CTSH-206	ENST00000528436	ESF1	Q9H501	851 aa	Known RBP	28.93	■■■□□ 2.22
CTSH-206	ENST00000528436	HSPA2	P54652	639 aa		28.92	■■■□□ 2.22
CTSH-206	ENST00000528436	KIDINS220	Q9ULH0	1771 aa		28.9	■■■□□ 2.22
CTSH-206	ENST00000528436	AGL	P35573	1532 aa		28.89	■■■□□ 2.22
CTSH-206	ENST00000528436	VPS8	Q8N3P4	1428 aa		28.89	■■■□□ 2.22
CTSH-206	ENST00000528436	ILDR1	Q86SU0	546 aa	Predicted RBP	28.89	■■■□□ 2.22
CTSH-206	ENST00000528436	TIAM1	Q13009	1591 aa		28.88	■■■□□ 2.21
CTSH-206	ENST00000528436	NCOA2	Q15596	1464 aa		28.84	■■■□□ 2.21
CTSH-206	ENST00000528436	ATP7A	Q04656	1500 aa		28.8	■■■□□ 2.2
CTSH-206	ENST00000528436	MBD5	Q9P267	1494 aa		28.8	■■■□□ 2.2
CTSH-206	ENST00000528436	SUPT6H	Q7KZ85	1726 aa	Known RBP	28.77	■■■□□ 2.2
CTSH-206	ENST00000528436	KANK4	Q5T7N3	995 aa	Predicted RBP	28.77	■■■□□ 2.2
CTSH-206	ENST00000528436	RSPH4A	Q5TD94	716 aa		28.77	■■■□□ 2.2
CTSH-206	ENST00000528436	A2M	P01023	1474 aa		28.77	■■■□□ 2.2
CTSH-206	ENST00000528436	LRRC9	Q6ZRR7	1453 aa		28.76	■■■□□ 2.19
CTSH-206	ENST00000528436	GGT6	Q6P531	493 aa		28.74	■■■□□ 2.19
CTSH-206	ENST00000528436	CNTLN	Q9NXG0	1405 aa		28.74	■■■□□ 2.19
CTSH-206	ENST00000528436	INO80	Q9ULG1	1556 aa	Predicted RBP	28.74	■■■□□ 2.19
CTSH-206	ENST00000528436	RTEL1-TNFRSF6B	F6WH68	1400 aa		28.72	■■■□□ 2.19
CTSH-206	ENST00000528436	UHRF1BP1	Q6BDS2	1440 aa		28.7	■■■□□ 2.19
CTSH-206	ENST00000528436	APLP2	Q06481	763 aa		28.7	■■■□□ 2.18
CTSH-206	ENST00000528436	ZMYM3	Q14202	1370 aa		28.69	■■■□□ 2.18
CTSH-206	ENST00000528436	CAMSAP2	Q08AD1	1489 aa		28.69	■■■□□ 2.18
CTSH-206	ENST00000528436	MAP3K1	Q13233	1512 aa		28.69	■■■□□ 2.18
CTSH-206	ENST00000528436	TSPY4	P0CV99	314 aa		28.68	■■■□□ 2.18
CTSH-206	ENST00000528436	TSPY10	P0CW01	314 aa		28.68	■■■□□ 2.18
CTSH-206	ENST00000528436	PREX1	Q8TCU6	1659 aa		28.67	■■■□□ 2.18
CTSH-206	ENST00000528436	CCDC141	Q6ZP82	1450 aa		28.66	■■■□□ 2.18
CTSH-206	ENST00000528436	DHX29	Q7Z478	1369 aa	Known RBP	28.66	■■■□□ 2.18
CTSH-206	ENST00000528436	PPP6R1	Q9UPN7	881 aa		28.66	■■■□□ 2.18
CTSH-206	ENST00000528436	C3	P01024	1663 aa		28.65	■■■□□ 2.18
CTSH-206	ENST00000528436	SETD1B	Q9UPS6	1966 aa	Known RBP	28.65	■■■□□ 2.18
CTSH-206	ENST00000528436	PLXNC1	O60486	1568 aa		28.65	■■■□□ 2.18
CTSH-206	ENST00000528436	KIF3B	O15066	747 aa		28.6	■■■□□ 2.17
CTSH-206	ENST00000528436	DMRT2	Q9Y5R5	561 aa		28.6	■■■□□ 2.17
CTSH-206	ENST00000528436	ADGB	Q8N7X0	1667 aa		28.6	■■■□□ 2.17
CTSH-206	ENST00000528436	FBXO41	Q8TF61	875 aa		28.59	■■■□□ 2.17
CTSH-206	ENST00000528436	NPAT	Q14207	1427 aa		28.57	■■■□□ 2.16
CTSH-206	ENST00000528436	MYOM3	Q5VTT5	1437 aa		28.55	■■■□□ 2.16
CTSH-206	ENST00000528436	MIA2	Q96PC5	1412 aa		28.55	■■■□□ 2.16
CTSH-206	ENST00000528436	ARHGEF5	Q12774	1597 aa		28.54	■■■□□ 2.16
CTSH-206	ENST00000528436	MROH2A	A6NES4	1674 aa		28.54	■■■□□ 2.16
CTSH-206	ENST00000528436	CLTC	Q00610	1675 aa	Known RBP	28.51	■■■□□ 2.16
CTSH-206	ENST00000528436	PTPRK	Q15262	1439 aa		28.49	■■■□□ 2.15
CTSH-206	ENST00000528436	WASHC2C	Q9Y4E1	1318 aa		28.48	■■■□□ 2.15
CTSH-206	ENST00000528436	CERK	Q8TCT0	537 aa		28.47	■■■□□ 2.15
CTSH-206	ENST00000528436	STRC	Q7RTU9	1775 aa		28.45	■■■□□ 2.14
CTSH-206	ENST00000528436	FBXO31	Q5XUX0	539 aa	Predicted RBP	28.41	■■■□□ 2.14
CTSH-206	ENST00000528436	PTPRT	O14522	1441 aa		28.4	■■■□□ 2.14
CTSH-206	ENST00000528436	NCOA1	Q15788	1441 aa		28.39	■■■□□ 2.14
CTSH-206	ENST00000528436	MAST1	Q9Y2H9	1570 aa		28.38	■■■□□ 2.13

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