RNA–Protein interactions for RNA: ENST00000528320.5

PUF60-212, Transcript of poly(U) binding splicing factor 60, humanhuman

TSL 2

Gene PUF60, Length 922 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUF60-212ENST00000528320 ATP1B4Q9UN42 357 aaPredicted RBP24.46■■□□□ 1.51
PUF60-212ENST00000528320 CDK11AQ9UQ88 783 aaPredicted RBP24.46■■□□□ 1.51
PUF60-212ENST00000528320 LMTK3Q96Q04 1460 aa24.45■■□□□ 1.51
PUF60-212ENST00000528320 SCAPERQ9BY12 1400 aa24.45■■□□□ 1.51
PUF60-212ENST00000528320 ZFYVE16Q7Z3T8 1539 aa24.45■■□□□ 1.5
PUF60-212ENST00000528320 EFCAB2Q5VUJ9 269 aa24.43■■□□□ 1.5
PUF60-212ENST00000528320 LRRIQ1Q96JM4 1722 aa24.43■■□□□ 1.5
PUF60-212ENST00000528320 RIMS1Q86UR5 1692 aaKnown RBP24.43■■□□□ 1.5
PUF60-212ENST00000528320 TROQ12816 1431 aaPredicted RBP24.4■■□□□ 1.5
PUF60-212ENST00000528320 MLECQ14165 292 aa24.37■■□□□ 1.49
PUF60-212ENST00000528320 FYCO1Q9BQS8 1478 aa24.37■■□□□ 1.49
PUF60-212ENST00000528320 SIGLEC1Q9BZZ2 1709 aa24.35■■□□□ 1.49
PUF60-212ENST00000528320 ATP10AO60312 1499 aa24.35■■□□□ 1.49
PUF60-212ENST00000528320 CCDC18Q5T9S5 1454 aa24.35■■□□□ 1.49
PUF60-212ENST00000528320 HSPA2P54652 639 aa24.35■■□□□ 1.49
PUF60-212ENST00000528320 PLPPR3Q6T4P5 718 aa24.35■■□□□ 1.49
PUF60-212ENST00000528320 CEP162Q5TB80 1403 aa24.32■■□□□ 1.48
PUF60-212ENST00000528320 LOC105371045A0A1W2PR82 267 aa24.31■■□□□ 1.48
PUF60-212ENST00000528320 MYO5CQ9NQX4 1742 aa24.31■■□□□ 1.48
PUF60-212ENST00000528320 KIF14Q15058 1648 aa24.31■■□□□ 1.48
PUF60-212ENST00000528320 C9orf84Q5VXU9 1444 aa24.3■■□□□ 1.48
PUF60-212ENST00000528320 AFAP1Q8N556 730 aa24.28■■□□□ 1.48
PUF60-212ENST00000528320 ZNF518AQ6AHZ1 1483 aa24.27■■□□□ 1.48
PUF60-212ENST00000528320 ARHGEF12Q9NZN5 1544 aa24.27■■□□□ 1.48
PUF60-212ENST00000528320 FER1L4A9Z1Z3 1794 aa24.26■■□□□ 1.47
PUF60-212ENST00000528320 ARHGAP5Q13017 1502 aa24.25■■□□□ 1.47
PUF60-212ENST00000528320 KDM5CP41229 1560 aa24.21■■□□□ 1.47
PUF60-212ENST00000528320 CEBPAP49715 358 aaPredicted RBP24.2■■□□□ 1.46
PUF60-212ENST00000528320 MYT1LQ9UL68 1186 aa24.2■■□□□ 1.46
PUF60-212ENST00000528320 MLH3Q9UHC1 1453 aa24.16■■□□□ 1.46
PUF60-212ENST00000528320 CERKQ8TCT0 537 aa24.16■■□□□ 1.46
PUF60-212ENST00000528320 CDC42BPBQ9Y5S2 1711 aa24.15■■□□□ 1.46
PUF60-212ENST00000528320 SETD1BQ9UPS6 1966 aaKnown RBP24.12■■□□□ 1.45
PUF60-212ENST00000528320 REREQ9P2R6 1566 aa24.12■■□□□ 1.45
PUF60-212ENST00000528320 DIP2CQ9Y2E4 1556 aa24.12■■□□□ 1.45
PUF60-212ENST00000528320 PREX1Q8TCU6 1659 aa24.11■■□□□ 1.45
PUF60-212ENST00000528320 TRAPPC8Q9Y2L5 1435 aa24.11■■□□□ 1.45
PUF60-212ENST00000528320 GPATCH8Q9UKJ3 1502 aaKnown RBP24.11■■□□□ 1.45
PUF60-212ENST00000528320 DMRT2Q9Y5R5 561 aa24.11■■□□□ 1.45
PUF60-212ENST00000528320 PREX2Q70Z35 1606 aa24.1■■□□□ 1.45
PUF60-212ENST00000528320 ABCC1P33527 1531 aa24.08■■□□□ 1.45
PUF60-212ENST00000528320 CDC42BPAQ5VT25 1732 aa24.07■■□□□ 1.44
PUF60-212ENST00000528320 AGLP35573 1532 aa24.07■■□□□ 1.44
PUF60-212ENST00000528320 ESF1Q9H501 851 aaKnown RBP24.07■■□□□ 1.44
PUF60-212ENST00000528320 UHRF1BP1Q6BDS2 1440 aa24.07■■□□□ 1.44
PUF60-212ENST00000528320 VPS8Q8N3P4 1428 aa24.07■■□□□ 1.44
PUF60-212ENST00000528320 ABCA6Q8N139 1617 aa24.06■■□□□ 1.44
PUF60-212ENST00000528320 MTUS2Q5JR59 1369 aa24.04■■□□□ 1.44
PUF60-212ENST00000528320 ITSN2Q9NZM3 1697 aa24.02■■□□□ 1.44
PUF60-212ENST00000528320 EHBP1L1Q8N3D4 1523 aa24■■□□□ 1.43
PUF60-212ENST00000528320 ZNF777Q9ULD5 760 aaPredicted RBP24■■□□□ 1.43
PUF60-212ENST00000528320 STRCQ7RTU9 1775 aa24■■□□□ 1.43
PUF60-212ENST00000528320 KIDINS220Q9ULH0 1771 aa24■■□□□ 1.43
PUF60-212ENST00000528320 CNTLNQ9NXG0 1405 aa23.98■■□□□ 1.43
PUF60-212ENST00000528320 KIAA1107Q9UPP5 1409 aa23.98■■□□□ 1.43
PUF60-212ENST00000528320 C3P01024 1663 aa23.98■■□□□ 1.43
PUF60-212ENST00000528320 MAP3K1Q13233 1512 aa23.97■■□□□ 1.43
PUF60-212ENST00000528320 CCNB3Q8WWL7 1395 aa23.97■■□□□ 1.43
PUF60-212ENST00000528320 TIAM1Q13009 1591 aa23.96■■□□□ 1.43
PUF60-212ENST00000528320 SAMD9LQ8IVG5 1584 aa23.96■■□□□ 1.43
PUF60-212ENST00000528320 SPAG9O60271 1321 aaKnown RBP23.96■■□□□ 1.43
PUF60-212ENST00000528320 HNRNPMP52272 730 aaKnown RBP eCLIP23.95■■□□□ 1.427e-7■■■□□ 18.4
PUF60-212ENST00000528320 CFDP1Q9UEE9 299 aaPredicted RBP23.95■■□□□ 1.42
PUF60-212ENST00000528320 PTPRTO14522 1441 aa23.94■■□□□ 1.42
PUF60-212ENST00000528320 LRRC9Q6ZRR7 1453 aa23.91■■□□□ 1.42
PUF60-212ENST00000528320 SYCP2Q9BX26 1530 aa23.9■■□□□ 1.42
PUF60-212ENST00000528320 NCOA2Q15596 1464 aa23.9■■□□□ 1.42
PUF60-212ENST00000528320 PLEKHH2Q8IVE3 1493 aa23.9■■□□□ 1.42
PUF60-212ENST00000528320 ZMYM3Q14202 1370 aa23.89■■□□□ 1.41
PUF60-212ENST00000528320 MBD5Q9P267 1494 aa23.88■■□□□ 1.41
PUF60-212ENST00000528320 ZNF644Q9H582 1327 aaPredicted RBP23.88■■□□□ 1.41
PUF60-212ENST00000528320 NPATQ14207 1427 aa23.88■■□□□ 1.41
PUF60-212ENST00000528320 KANK4Q5T7N3 995 aaPredicted RBP23.88■■□□□ 1.41
PUF60-212ENST00000528320 NCOA1Q15788 1441 aa23.84■■□□□ 1.41
PUF60-212ENST00000528320 ATP7AQ04656 1500 aa23.84■■□□□ 1.41
PUF60-212ENST00000528320 MROH2AA6NES4 1674 aa23.83■■□□□ 1.41
PUF60-212ENST00000528320 SUPT6HQ7KZ85 1726 aaKnown RBP23.83■■□□□ 1.41
PUF60-212ENST00000528320 A2MP01023 1474 aa23.82■■□□□ 1.4
PUF60-212ENST00000528320 PPP6R1Q9UPN7 881 aa23.81■■□□□ 1.4
PUF60-212ENST00000528320 PLXNC1O60486 1568 aa23.79■■□□□ 1.4
PUF60-212ENST00000528320 INO80Q9ULG1 1556 aaPredicted RBP23.79■■□□□ 1.4
PUF60-212ENST00000528320 GGT6Q6P531 493 aa23.79■■□□□ 1.4
PUF60-212ENST00000528320 LTBP4Q8N2S1 1624 aa23.77■■□□□ 1.4
PUF60-212ENST00000528320 CAMSAP1Q5T5Y3 1602 aa23.76■■□□□ 1.39
PUF60-212ENST00000528320 RTEL1-TNFRSF6BF6WH68 1400 aa23.75■■□□□ 1.39
PUF60-212ENST00000528320 RSPH4AQ5TD94 716 aa23.74■■□□□ 1.39
PUF60-212ENST00000528320 PTPRKQ15262 1439 aa23.74■■□□□ 1.39
PUF60-212ENST00000528320 IQSEC2Q5JU85 1478 aa23.74■■□□□ 1.39
PUF60-212ENST00000528320 NCKAP5LQ9HCH0 1330 aa23.73■■□□□ 1.39
PUF60-212ENST00000528320 CLTCQ00610 1675 aaKnown RBP23.73■■□□□ 1.39
PUF60-212ENST00000528320 PKD2Q13563 968 aa23.72■■□□□ 1.39
PUF60-212ENST00000528320 CAMSAP2Q08AD1 1489 aa23.72■■□□□ 1.39
PUF60-212ENST00000528320 MIA2Q96PC5 1412 aa23.7■■□□□ 1.38
PUF60-212ENST00000528320 ADGBQ8N7X0 1667 aa23.7■■□□□ 1.38
PUF60-212ENST00000528320 MYOM3Q5VTT5 1437 aa23.69■■□□□ 1.38
PUF60-212ENST00000528320 DISP3Q9P2K9 1392 aa23.69■■□□□ 1.38
PUF60-212ENST00000528320 PLA2R1Q13018 1463 aa23.68■■□□□ 1.38
PUF60-212ENST00000528320 DHX29Q7Z478 1369 aaKnown RBP23.68■■□□□ 1.38
PUF60-212ENST00000528320 ARHGEF5Q12774 1597 aa23.68■■□□□ 1.38
PUF60-212ENST00000528320 CCDC141Q6ZP82 1450 aa23.68■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms