RNA–Protein interactions for RNA: ENST00000528182.5

SDHD-206, Transcript of succinate dehydrogenase complex subunit D, humanhuman

TSL 3 BASIC

Gene SDHD, Length 754 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHD-206ENST00000528182 RIMS1Q86UR5 1692 aaKnown RBP29.4■■■□□ 2.3
SDHD-206ENST00000528182 POGZQ7Z3K3 1410 aa29.4■■■□□ 2.3
SDHD-206ENST00000528182 EFCAB2Q5VUJ9 269 aa29.39■■■□□ 2.3
SDHD-206ENST00000528182 KIF14Q15058 1648 aa29.38■■■□□ 2.29
SDHD-206ENST00000528182 TROQ12816 1431 aaPredicted RBP29.37■■■□□ 2.29
SDHD-206ENST00000528182 LRRIQ1Q96JM4 1722 aa29.35■■■□□ 2.29
SDHD-206ENST00000528182 SIGLEC1Q9BZZ2 1709 aa29.35■■■□□ 2.29
SDHD-206ENST00000528182 CLIP1P30622 1438 aa29.34■■■□□ 2.29
SDHD-206ENST00000528182 PCF11O94913 1555 aaKnown RBP29.34■■■□□ 2.29
SDHD-206ENST00000528182 LMTK3Q96Q04 1460 aa29.29■■■□□ 2.28
SDHD-206ENST00000528182 ARHGAP5Q13017 1502 aa29.29■■■□□ 2.28
SDHD-206ENST00000528182 ATP10AO60312 1499 aa29.28■■■□□ 2.28
SDHD-206ENST00000528182 MLECQ14165 292 aa29.27■■■□□ 2.28
SDHD-206ENST00000528182 ZNF518AQ6AHZ1 1483 aa29.25■■■□□ 2.27
SDHD-206ENST00000528182 FER1L4A9Z1Z3 1794 aa29.25■■■□□ 2.27
SDHD-206ENST00000528182 C9orf84Q5VXU9 1444 aa29.24■■■□□ 2.27
SDHD-206ENST00000528182 PLPPR3Q6T4P5 718 aa29.24■■■□□ 2.27
SDHD-206ENST00000528182 CASKIN1Q8WXD9 1431 aa29.24■■■□□ 2.27
SDHD-206ENST00000528182 CCDC18Q5T9S5 1454 aa29.23■■■□□ 2.27
SDHD-206ENST00000528182 CDC42BPBQ9Y5S2 1711 aa29.21■■■□□ 2.27
SDHD-206ENST00000528182 AFAP1Q8N556 730 aa29.2■■■□□ 2.26
SDHD-206ENST00000528182 KDM5CP41229 1560 aa29.19■■■□□ 2.26
SDHD-206ENST00000528182 ARHGEF12Q9NZN5 1544 aa29.17■■■□□ 2.26
SDHD-206ENST00000528182 MYT1LQ9UL68 1186 aa29.16■■■□□ 2.26
SDHD-206ENST00000528182 PREX2Q70Z35 1606 aa29.16■■■□□ 2.26
SDHD-206ENST00000528182 HSPA2P54652 639 aa29.13■■■□□ 2.25
SDHD-206ENST00000528182 FYCO1Q9BQS8 1478 aa29.12■■■□□ 2.25
SDHD-206ENST00000528182 FBXO41Q8TF61 875 aa29.12■■■□□ 2.25
SDHD-206ENST00000528182 DIP2CQ9Y2E4 1556 aa29.09■■■□□ 2.25
SDHD-206ENST00000528182 MLH3Q9UHC1 1453 aa29.09■■■□□ 2.25
SDHD-206ENST00000528182 ABCC1P33527 1531 aa29.09■■■□□ 2.25
SDHD-206ENST00000528182 CDC42BPAQ5VT25 1732 aa29.07■■■□□ 2.24
SDHD-206ENST00000528182 ITSN2Q9NZM3 1697 aa29.07■■■□□ 2.24
SDHD-206ENST00000528182 REREQ9P2R6 1566 aa29.06■■■□□ 2.24
SDHD-206ENST00000528182 TRAPPC8Q9Y2L5 1435 aa29.05■■■□□ 2.24
SDHD-206ENST00000528182 ABCA6Q8N139 1617 aa29.05■■■□□ 2.24
SDHD-206ENST00000528182 CEBPAP49715 358 aaPredicted RBP29.02■■■□□ 2.24
SDHD-206ENST00000528182 PREX1Q8TCU6 1659 aa29.02■■■□□ 2.24
SDHD-206ENST00000528182 AGLP35573 1532 aa28.97■■■□□ 2.23
SDHD-206ENST00000528182 KIDINS220Q9ULH0 1771 aa28.97■■■□□ 2.23
SDHD-206ENST00000528182 ZNF777Q9ULD5 760 aaPredicted RBP28.96■■■□□ 2.23
SDHD-206ENST00000528182 GPATCH8Q9UKJ3 1502 aaKnown RBP28.94■■■□□ 2.22
SDHD-206ENST00000528182 SETD1BQ9UPS6 1966 aaKnown RBP28.94■■■□□ 2.22
SDHD-206ENST00000528182 SAMD9LQ8IVG5 1584 aa28.93■■■□□ 2.22
SDHD-206ENST00000528182 ESF1Q9H501 851 aaKnown RBP28.92■■■□□ 2.22
SDHD-206ENST00000528182 C3P01024 1663 aa28.89■■■□□ 2.22
SDHD-206ENST00000528182 SYCP2Q9BX26 1530 aa28.89■■■□□ 2.22
SDHD-206ENST00000528182 UHRF1BP1Q6BDS2 1440 aa28.89■■■□□ 2.22
SDHD-206ENST00000528182 HNRNPMP52272 730 aaKnown RBP eCLIP28.86■■■□□ 2.21
SDHD-206ENST00000528182 CFDP1Q9UEE9 299 aaPredicted RBP28.86■■■□□ 2.21
SDHD-206ENST00000528182 CCNB3Q8WWL7 1395 aa28.86■■■□□ 2.21
SDHD-206ENST00000528182 SPAG9O60271 1321 aaKnown RBP28.85■■■□□ 2.21
SDHD-206ENST00000528182 MTUS2Q5JR59 1369 aa28.85■■■□□ 2.21
SDHD-206ENST00000528182 PLEKHH2Q8IVE3 1493 aa28.84■■■□□ 2.21
SDHD-206ENST00000528182 CNTLNQ9NXG0 1405 aa28.83■■■□□ 2.21
SDHD-206ENST00000528182 KIAA1107Q9UPP5 1409 aa28.83■■■□□ 2.21
SDHD-206ENST00000528182 STRCQ7RTU9 1775 aa28.81■■■□□ 2.2
SDHD-206ENST00000528182 CERKQ8TCT0 537 aa28.81■■■□□ 2.2
SDHD-206ENST00000528182 DMRT2Q9Y5R5 561 aa28.81■■■□□ 2.2
SDHD-206ENST00000528182 ATP7AQ04656 1500 aa28.79■■■□□ 2.2
SDHD-206ENST00000528182 SUPT6HQ7KZ85 1726 aaKnown RBP28.77■■■□□ 2.2
SDHD-206ENST00000528182 INO80Q9ULG1 1556 aaPredicted RBP28.76■■■□□ 2.19
SDHD-206ENST00000528182 EHBP1L1Q8N3D4 1523 aa28.74■■■□□ 2.19
SDHD-206ENST00000528182 MROH2AA6NES4 1674 aa28.74■■■□□ 2.19
SDHD-206ENST00000528182 TIAM1Q13009 1591 aa28.73■■■□□ 2.19
SDHD-206ENST00000528182 CEP162Q5TB80 1403 aa28.72■■■□□ 2.19
SDHD-206ENST00000528182 A2MP01023 1474 aa28.72■■■□□ 2.19
SDHD-206ENST00000528182 PLXNC1O60486 1568 aa28.71■■■□□ 2.19
SDHD-206ENST00000528182 ZMYM3Q14202 1370 aa28.69■■■□□ 2.18
SDHD-206ENST00000528182 NPATQ14207 1427 aa28.68■■■□□ 2.18
SDHD-206ENST00000528182 ZNF644Q9H582 1327 aaPredicted RBP28.68■■■□□ 2.18
SDHD-206ENST00000528182 ADGBQ8N7X0 1667 aa28.67■■■□□ 2.18
SDHD-206ENST00000528182 PTPRTO14522 1441 aa28.66■■■□□ 2.18
SDHD-206ENST00000528182 CLTCQ00610 1675 aaKnown RBP28.65■■■□□ 2.18
SDHD-206ENST00000528182 MBD5Q9P267 1494 aa28.64■■■□□ 2.17
SDHD-206ENST00000528182 GGT6Q6P531 493 aa28.62■■■□□ 2.17
SDHD-206ENST00000528182 NCOA1Q15788 1441 aa28.6■■■□□ 2.17
SDHD-206ENST00000528182 RTEL1-TNFRSF6BF6WH68 1400 aa28.59■■■□□ 2.17
SDHD-206ENST00000528182 PPP6R1Q9UPN7 881 aa28.58■■■□□ 2.17
SDHD-206ENST00000528182 CAMSAP1Q5T5Y3 1602 aa28.57■■■□□ 2.16
SDHD-206ENST00000528182 NCOA2Q15596 1464 aa28.56■■■□□ 2.16
SDHD-206ENST00000528182 PTPRKQ15262 1439 aa28.53■■■□□ 2.16
SDHD-206ENST00000528182 DHX29Q7Z478 1369 aaKnown RBP28.52■■■□□ 2.16
SDHD-206ENST00000528182 MYO3AQ8NEV4 1616 aa28.52■■■□□ 2.16
SDHD-206ENST00000528182 CAMSAP2Q08AD1 1489 aa28.52■■■□□ 2.16
SDHD-206ENST00000528182 ZNF142P52746 1687 aaPredicted RBP28.51■■■□□ 2.16
SDHD-206ENST00000528182 RSPH4AQ5TD94 716 aa28.51■■■□□ 2.15
SDHD-206ENST00000528182 CCDC141Q6ZP82 1450 aa28.51■■■□□ 2.15
SDHD-206ENST00000528182 LTBP4Q8N2S1 1624 aa28.48■■■□□ 2.15
SDHD-206ENST00000528182 CEP170BQ9Y4F5 1589 aaPredicted RBP28.47■■■□□ 2.15
SDHD-206ENST00000528182 NCKAP5LQ9HCH0 1330 aa28.45■■■□□ 2.15
SDHD-206ENST00000528182 VPS8Q8N3P4 1428 aa28.44■■■□□ 2.14
SDHD-206ENST00000528182 KIF3BO15066 747 aa28.44■■■□□ 2.14
SDHD-206ENST00000528182 PLA2R1Q13018 1463 aa28.44■■■□□ 2.14
SDHD-206ENST00000528182 LOC105371045A0A1W2PR82 267 aa28.42■■■□□ 2.14
SDHD-206ENST00000528182 PKD2Q13563 968 aa28.42■■■□□ 2.14
SDHD-206ENST00000528182 ARHGEF5Q12774 1597 aa28.41■■■□□ 2.14
SDHD-206ENST00000528182 IQSEC2Q5JU85 1478 aa28.4■■■□□ 2.14
SDHD-206ENST00000528182 LRRC9Q6ZRR7 1453 aa28.4■■■□□ 2.14
SDHD-206ENST00000528182 TSPY4P0CV99 314 aa28.39■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms