RNA–Protein interactions for RNA: ENST00000528048.5

SDHD-205, Transcript of succinate dehydrogenase complex subunit D, humanhuman

TSL 1 (best) BASIC

Gene SDHD, Length 905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHD-205ENST00000528048 PPRC1Q5VV67 1664 aaKnown RBP19.17■□□□□ 0.66
SDHD-205ENST00000528048 PLCH2O75038 1416 aa19.16■□□□□ 0.66
SDHD-205ENST00000528048 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.15■□□□□ 0.665e-8■■■■■ 28.6
SDHD-205ENST00000528048 MTUS2Q5JR59 1369 aa19.14■□□□□ 0.65
SDHD-205ENST00000528048 AKNAQ7Z591 1439 aa19.14■□□□□ 0.65
SDHD-205ENST00000528048 ARAP3Q8WWN8 1544 aa19.14■□□□□ 0.65
SDHD-205ENST00000528048 PCF11O94913 1555 aaKnown RBP19.14■□□□□ 0.65
SDHD-205ENST00000528048 FANCAO15360 1455 aa19.13■□□□□ 0.65
SDHD-205ENST00000528048 APLP2Q06481 763 aa19.1■□□□□ 0.65
SDHD-205ENST00000528048 NCBP3Q53F19 620 aaKnown RBP19.1■□□□□ 0.65
SDHD-205ENST00000528048 DENND4BO75064 1496 aaPredicted RBP19.09■□□□□ 0.65
SDHD-205ENST00000528048 ZNF777Q9ULD5 760 aaPredicted RBP19.07■□□□□ 0.64
SDHD-205ENST00000528048 SCAPERQ9BY12 1400 aa19.07■□□□□ 0.64
SDHD-205ENST00000528048 MYT1LQ9UL68 1186 aa19.06■□□□□ 0.64
SDHD-205ENST00000528048 KIF14Q15058 1648 aa19.06■□□□□ 0.64
SDHD-205ENST00000528048 VPS8Q8N3P4 1428 aa19.06■□□□□ 0.64
SDHD-205ENST00000528048 CFDP1Q9UEE9 299 aaPredicted RBP19.05■□□□□ 0.64
SDHD-205ENST00000528048 KDM4FA0A1W2PPD8 638 aa19.04■□□□□ 0.64
SDHD-205ENST00000528048 TTC37Q6PGP7 1564 aa19.04■□□□□ 0.64
SDHD-205ENST00000528048 CCNB3Q8WWL7 1395 aa19.04■□□□□ 0.64
SDHD-205ENST00000528048 ARID4BQ4LE39 1312 aaPredicted RBP19.03■□□□□ 0.64
SDHD-205ENST00000528048 ADGRL1O94910 1474 aa19.03■□□□□ 0.64
SDHD-205ENST00000528048 ARHGAP5Q13017 1502 aa19.02■□□□□ 0.64
SDHD-205ENST00000528048 AFAP1Q8N556 730 aa19■□□□□ 0.63
SDHD-205ENST00000528048 CFAP74Q9C0B2 1584 aa18.99■□□□□ 0.63
SDHD-205ENST00000528048 C1QBPQ07021 282 aaKnown RBP18.99■□□□□ 0.63
SDHD-205ENST00000528048 GPATCH8Q9UKJ3 1502 aaKnown RBP18.95■□□□□ 0.62
SDHD-205ENST00000528048 POGZQ7Z3K3 1410 aa18.94■□□□□ 0.62
SDHD-205ENST00000528048 HNRNPMP52272 730 aaKnown RBP eCLIP18.94■□□□□ 0.62
SDHD-205ENST00000528048 MAGI2Q86UL8 1455 aa18.93■□□□□ 0.62
SDHD-205ENST00000528048 LRRIQ1Q96JM4 1722 aa18.92■□□□□ 0.62
SDHD-205ENST00000528048 KANK4Q5T7N3 995 aaPredicted RBP18.92■□□□□ 0.62
SDHD-205ENST00000528048 EHBP1L1Q8N3D4 1523 aa18.91■□□□□ 0.62
SDHD-205ENST00000528048 ZNF518AQ6AHZ1 1483 aa18.9■□□□□ 0.62
SDHD-205ENST00000528048 MYO5CQ9NQX4 1742 aa18.88■□□□□ 0.61
SDHD-205ENST00000528048 SPAG9O60271 1321 aaKnown RBP18.88■□□□□ 0.61
SDHD-205ENST00000528048 LRRC9Q6ZRR7 1453 aa18.87■□□□□ 0.61
SDHD-205ENST00000528048 PLEKHH2Q8IVE3 1493 aa18.87■□□□□ 0.61
SDHD-205ENST00000528048 MAP3K1Q13233 1512 aa18.86■□□□□ 0.61
SDHD-205ENST00000528048 NCOA2Q15596 1464 aa18.86■□□□□ 0.61
SDHD-205ENST00000528048 YEATS2Q9ULM3 1422 aa18.86■□□□□ 0.61
SDHD-205ENST00000528048 KIAA1107Q9UPP5 1409 aa18.86■□□□□ 0.61
SDHD-205ENST00000528048 TRAPPC8Q9Y2L5 1435 aa18.86■□□□□ 0.61
SDHD-205ENST00000528048 ZNF644Q9H582 1327 aaPredicted RBP18.86■□□□□ 0.61
SDHD-205ENST00000528048 MLECQ14165 292 aa18.86■□□□□ 0.61
SDHD-205ENST00000528048 RSPH4AQ5TD94 716 aa18.85■□□□□ 0.61
SDHD-205ENST00000528048 TIAM1Q13009 1591 aa18.85■□□□□ 0.61
SDHD-205ENST00000528048 FRMPD1Q5SYB0 1578 aa18.85■□□□□ 0.61
SDHD-205ENST00000528048 ZFYVE16Q7Z3T8 1539 aa18.84■□□□□ 0.61
SDHD-205ENST00000528048 ATP10AO60312 1499 aa18.84■□□□□ 0.61
SDHD-205ENST00000528048 ZMYM4Q5VZL5 1548 aa18.83■□□□□ 0.6
SDHD-205ENST00000528048 PREX2Q70Z35 1606 aa18.82■□□□□ 0.6
SDHD-205ENST00000528048 ARHGEF12Q9NZN5 1544 aa18.82■□□□□ 0.6
SDHD-205ENST00000528048 MLH3Q9UHC1 1453 aa18.8■□□□□ 0.6
SDHD-205ENST00000528048 TSPY4P0CV99 314 aa18.8■□□□□ 0.6
SDHD-205ENST00000528048 TSPY10P0CW01 314 aa18.8■□□□□ 0.6
SDHD-205ENST00000528048 C9orf84Q5VXU9 1444 aa18.79■□□□□ 0.6
SDHD-205ENST00000528048 ABCC1P33527 1531 aa18.79■□□□□ 0.6
SDHD-205ENST00000528048 RICTORQ6R327 1708 aa18.78■□□□□ 0.6
SDHD-205ENST00000528048 ESF1Q9H501 851 aaKnown RBP18.78■□□□□ 0.6
SDHD-205ENST00000528048 ARHGEF40Q8TER5 1519 aa18.78■□□□□ 0.6
SDHD-205ENST00000528048 CDC42BPBQ9Y5S2 1711 aa18.77■□□□□ 0.6
SDHD-205ENST00000528048 SYCP2Q9BX26 1530 aa18.74■□□□□ 0.59
SDHD-205ENST00000528048 SUPT6HQ7KZ85 1726 aaKnown RBP18.74■□□□□ 0.59
SDHD-205ENST00000528048 KDM5CP41229 1560 aa18.74■□□□□ 0.59
SDHD-205ENST00000528048 SAMD9LQ8IVG5 1584 aa18.74■□□□□ 0.59
SDHD-205ENST00000528048 CDC42BPAQ5VT25 1732 aa18.74■□□□□ 0.59
SDHD-205ENST00000528048 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.72■□□□□ 0.59
SDHD-205ENST00000528048 MYOM3Q5VTT5 1437 aa18.72■□□□□ 0.59
SDHD-205ENST00000528048 MIA2Q96PC5 1412 aa18.72■□□□□ 0.59
SDHD-205ENST00000528048 MBD5Q9P267 1494 aa18.71■□□□□ 0.59
SDHD-205ENST00000528048 NPM3O75607 178 aaKnown RBP18.71■□□□□ 0.59
SDHD-205ENST00000528048 HECW2Q9P2P5 1572 aa18.69■□□□□ 0.58
SDHD-205ENST00000528048 CAMSAP2Q08AD1 1489 aa18.69■□□□□ 0.58
SDHD-205ENST00000528048 RTEL1-TNFRSF6BF6WH68 1400 aa18.68■□□□□ 0.58
SDHD-205ENST00000528048 ITSN2Q9NZM3 1697 aa18.67■□□□□ 0.58
SDHD-205ENST00000528048 PTPRMP28827 1452 aa18.67■□□□□ 0.58
SDHD-205ENST00000528048 CCDC141Q6ZP82 1450 aa18.66■□□□□ 0.58
SDHD-205ENST00000528048 GGT6Q6P531 493 aa18.66■□□□□ 0.58
SDHD-205ENST00000528048 FAM50AQ14320 339 aaKnown RBP18.64■□□□□ 0.57
SDHD-205ENST00000528048 PPARGC1BQ86YN6 1023 aaKnown RBP18.64■□□□□ 0.57
SDHD-205ENST00000528048 DIP2CQ9Y2E4 1556 aa18.64■□□□□ 0.57
SDHD-205ENST00000528048 DHX29Q7Z478 1369 aaKnown RBP18.63■□□□□ 0.57
SDHD-205ENST00000528048 A2MP01023 1474 aa18.63■□□□□ 0.57
SDHD-205ENST00000528048 ATP7AQ04656 1500 aa18.63■□□□□ 0.57
SDHD-205ENST00000528048 KIF3BO15066 747 aa18.62■□□□□ 0.57
SDHD-205ENST00000528048 CEBPAP49715 358 aaPredicted RBP18.62■□□□□ 0.57
SDHD-205ENST00000528048 BCORL1Q5H9F3 1711 aa18.61■□□□□ 0.57
SDHD-205ENST00000528048 ADAMTSL3P82987 1691 aa18.6■□□□□ 0.57
SDHD-205ENST00000528048 AGLP35573 1532 aa18.6■□□□□ 0.57
SDHD-205ENST00000528048 REREQ9P2R6 1566 aa18.59■□□□□ 0.57
SDHD-205ENST00000528048 FGD6Q6ZV73 1430 aa18.59■□□□□ 0.57
SDHD-205ENST00000528048 ABCA6Q8N139 1617 aa18.58■□□□□ 0.56
SDHD-205ENST00000528048 CHIC2Q9UKJ5 165 aa18.57■□□□□ 0.56
SDHD-205ENST00000528048 KIDINS220Q9ULH0 1771 aa18.57■□□□□ 0.56
SDHD-205ENST00000528048 MADDQ8WXG6 1647 aa18.56■□□□□ 0.56
SDHD-205ENST00000528048 RRP7BPQ9NSQ0 103 aa18.56■□□□□ 0.56
SDHD-205ENST00000528048 CNTLNQ9NXG0 1405 aa18.56■□□□□ 0.56
SDHD-205ENST00000528048 ARHGEF5Q12774 1597 aa18.55■□□□□ 0.56
SDHD-205ENST00000528048 ABCC5O15440 1437 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms