RNA–Protein interactions for RNA: ENST00000528010.1

TM9SF1-205, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 2

Gene TM9SF1, Length 904 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-205ENST00000528010 EFCAB2Q5VUJ9 269 aa25.63■■□□□ 1.69
TM9SF1-205ENST00000528010 TROQ12816 1431 aaPredicted RBP25.63■■□□□ 1.69
TM9SF1-205ENST00000528010 KIF14Q15058 1648 aa25.62■■□□□ 1.69
TM9SF1-205ENST00000528010 MYO5CQ9NQX4 1742 aa25.61■■□□□ 1.69
TM9SF1-205ENST00000528010 CLIP1P30622 1438 aa25.61■■□□□ 1.69
TM9SF1-205ENST00000528010 RIMS1Q86UR5 1692 aaKnown RBP25.61■■□□□ 1.69
TM9SF1-205ENST00000528010 PCF11O94913 1555 aaKnown RBP25.61■■□□□ 1.69
TM9SF1-205ENST00000528010 LMTK3Q96Q04 1460 aa25.57■■□□□ 1.68
TM9SF1-205ENST00000528010 SIGLEC1Q9BZZ2 1709 aa25.54■■□□□ 1.68
TM9SF1-205ENST00000528010 ATP10AO60312 1499 aa25.53■■□□□ 1.68
TM9SF1-205ENST00000528010 C9orf84Q5VXU9 1444 aa25.53■■□□□ 1.68
TM9SF1-205ENST00000528010 ZNF518AQ6AHZ1 1483 aa25.53■■□□□ 1.68
TM9SF1-205ENST00000528010 ARHGAP5Q13017 1502 aa25.53■■□□□ 1.68
TM9SF1-205ENST00000528010 CASKIN1Q8WXD9 1431 aa25.51■■□□□ 1.67
TM9SF1-205ENST00000528010 CCDC18Q5T9S5 1454 aa25.51■■□□□ 1.67
TM9SF1-205ENST00000528010 LRRIQ1Q96JM4 1722 aa25.5■■□□□ 1.67
TM9SF1-205ENST00000528010 MLECQ14165 292 aa25.49■■□□□ 1.67
TM9SF1-205ENST00000528010 KDM5CP41229 1560 aa25.48■■□□□ 1.67
TM9SF1-205ENST00000528010 FER1L4A9Z1Z3 1794 aa25.46■■□□□ 1.67
TM9SF1-205ENST00000528010 ARHGEF12Q9NZN5 1544 aa25.46■■□□□ 1.67
TM9SF1-205ENST00000528010 PLPPR3Q6T4P5 718 aa25.44■■□□□ 1.66
TM9SF1-205ENST00000528010 FBXO41Q8TF61 875 aa25.44■■□□□ 1.66
TM9SF1-205ENST00000528010 AFAP1Q8N556 730 aa25.43■■□□□ 1.66
TM9SF1-205ENST00000528010 PREX2Q70Z35 1606 aa25.41■■□□□ 1.66
TM9SF1-205ENST00000528010 FYCO1Q9BQS8 1478 aa25.4■■□□□ 1.66
TM9SF1-205ENST00000528010 CDC42BPBQ9Y5S2 1711 aa25.4■■□□□ 1.66
TM9SF1-205ENST00000528010 MYT1LQ9UL68 1186 aa25.39■■□□□ 1.66
TM9SF1-205ENST00000528010 HSPA2P54652 639 aa25.38■■□□□ 1.65
TM9SF1-205ENST00000528010 MLH3Q9UHC1 1453 aa25.38■■□□□ 1.65
TM9SF1-205ENST00000528010 ABCC1P33527 1531 aa25.37■■□□□ 1.65
TM9SF1-205ENST00000528010 REREQ9P2R6 1566 aa25.37■■□□□ 1.65
TM9SF1-205ENST00000528010 DIP2CQ9Y2E4 1556 aa25.37■■□□□ 1.65
TM9SF1-205ENST00000528010 TRAPPC8Q9Y2L5 1435 aa25.33■■□□□ 1.65
TM9SF1-205ENST00000528010 ABCA6Q8N139 1617 aa25.31■■□□□ 1.64
TM9SF1-205ENST00000528010 ITSN2Q9NZM3 1697 aa25.31■■□□□ 1.64
TM9SF1-205ENST00000528010 AGLP35573 1532 aa25.29■■□□□ 1.64
TM9SF1-205ENST00000528010 PREX1Q8TCU6 1659 aa25.29■■□□□ 1.64
TM9SF1-205ENST00000528010 CDC42BPAQ5VT25 1732 aa25.29■■□□□ 1.64
TM9SF1-205ENST00000528010 CEBPAP49715 358 aaPredicted RBP25.27■■□□□ 1.64
TM9SF1-205ENST00000528010 GPATCH8Q9UKJ3 1502 aaKnown RBP25.23■■□□□ 1.63
TM9SF1-205ENST00000528010 KIDINS220Q9ULH0 1771 aa25.23■■□□□ 1.63
TM9SF1-205ENST00000528010 UHRF1BP1Q6BDS2 1440 aa25.22■■□□□ 1.63
TM9SF1-205ENST00000528010 ESF1Q9H501 851 aaKnown RBP25.22■■□□□ 1.63
TM9SF1-205ENST00000528010 ZNF777Q9ULD5 760 aaPredicted RBP25.21■■□□□ 1.63
TM9SF1-205ENST00000528010 SAMD9LQ8IVG5 1584 aa25.21■■□□□ 1.63
TM9SF1-205ENST00000528010 SYCP2Q9BX26 1530 aa25.19■■□□□ 1.62
TM9SF1-205ENST00000528010 PLEKHH2Q8IVE3 1493 aa25.18■■□□□ 1.62
TM9SF1-205ENST00000528010 CNTLNQ9NXG0 1405 aa25.18■■□□□ 1.62
TM9SF1-205ENST00000528010 KIAA1107Q9UPP5 1409 aa25.18■■□□□ 1.62
TM9SF1-205ENST00000528010 SETD1BQ9UPS6 1966 aaKnown RBP25.16■■□□□ 1.62
TM9SF1-205ENST00000528010 CFDP1Q9UEE9 299 aaPredicted RBP25.16■■□□□ 1.62
TM9SF1-205ENST00000528010 MTUS2Q5JR59 1369 aa25.16■■□□□ 1.62
TM9SF1-205ENST00000528010 CCNB3Q8WWL7 1395 aa25.16■■□□□ 1.62
TM9SF1-205ENST00000528010 SPAG9O60271 1321 aaKnown RBP25.15■■□□□ 1.62
TM9SF1-205ENST00000528010 DMRT2Q9Y5R5 561 aa25.15■■□□□ 1.62
TM9SF1-205ENST00000528010 C3P01024 1663 aa25.15■■□□□ 1.62
TM9SF1-205ENST00000528010 HNRNPMP52272 730 aaKnown RBP eCLIP25.14■■□□□ 1.62
TM9SF1-205ENST00000528010 CERKQ8TCT0 537 aa25.14■■□□□ 1.62
TM9SF1-205ENST00000528010 ATP7AQ04656 1500 aa25.1■■□□□ 1.61
TM9SF1-205ENST00000528010 INO80Q9ULG1 1556 aaPredicted RBP25.08■■□□□ 1.61
TM9SF1-205ENST00000528010 STRCQ7RTU9 1775 aa25.08■■□□□ 1.6
TM9SF1-205ENST00000528010 EHBP1L1Q8N3D4 1523 aa25.07■■□□□ 1.6
TM9SF1-205ENST00000528010 NPATQ14207 1427 aa25.05■■□□□ 1.6
TM9SF1-205ENST00000528010 MROH2AA6NES4 1674 aa25.05■■□□□ 1.6
TM9SF1-205ENST00000528010 PLXNC1O60486 1568 aa25.05■■□□□ 1.6
TM9SF1-205ENST00000528010 A2MP01023 1474 aa25.04■■□□□ 1.6
TM9SF1-205ENST00000528010 PTPRTO14522 1441 aa25.03■■□□□ 1.6
TM9SF1-205ENST00000528010 CEP162Q5TB80 1403 aa25.03■■□□□ 1.6
TM9SF1-205ENST00000528010 TIAM1Q13009 1591 aa25.03■■□□□ 1.6
TM9SF1-205ENST00000528010 SUPT6HQ7KZ85 1726 aaKnown RBP25.02■■□□□ 1.6
TM9SF1-205ENST00000528010 ZMYM3Q14202 1370 aa25.02■■□□□ 1.6
TM9SF1-205ENST00000528010 MBD5Q9P267 1494 aa24.97■■□□□ 1.59
TM9SF1-205ENST00000528010 ZNF644Q9H582 1327 aaPredicted RBP24.97■■□□□ 1.59
TM9SF1-205ENST00000528010 RTEL1-TNFRSF6BF6WH68 1400 aa24.96■■□□□ 1.59
TM9SF1-205ENST00000528010 NCOA1Q15788 1441 aa24.96■■□□□ 1.59
TM9SF1-205ENST00000528010 PPP6R1Q9UPN7 881 aa24.96■■□□□ 1.59
TM9SF1-205ENST00000528010 ADGBQ8N7X0 1667 aa24.96■■□□□ 1.59
TM9SF1-205ENST00000528010 GGT6Q6P531 493 aa24.94■■□□□ 1.58
TM9SF1-205ENST00000528010 CLTCQ00610 1675 aaKnown RBP24.93■■□□□ 1.58
TM9SF1-205ENST00000528010 CAMSAP1Q5T5Y3 1602 aa24.9■■□□□ 1.58
TM9SF1-205ENST00000528010 NCOA2Q15596 1464 aa24.89■■□□□ 1.58
TM9SF1-205ENST00000528010 PTPRKQ15262 1439 aa24.89■■□□□ 1.58
TM9SF1-205ENST00000528010 DHX29Q7Z478 1369 aaKnown RBP24.88■■□□□ 1.57
TM9SF1-205ENST00000528010 CCDC141Q6ZP82 1450 aa24.88■■□□□ 1.57
TM9SF1-205ENST00000528010 RSPH4AQ5TD94 716 aa24.87■■□□□ 1.57
TM9SF1-205ENST00000528010 ZNF142P52746 1687 aaPredicted RBP24.86■■□□□ 1.57
TM9SF1-205ENST00000528010 MYO3AQ8NEV4 1616 aa24.86■■□□□ 1.57
TM9SF1-205ENST00000528010 CAMSAP2Q08AD1 1489 aa24.85■■□□□ 1.57
TM9SF1-205ENST00000528010 PLA2R1Q13018 1463 aa24.84■■□□□ 1.57
TM9SF1-205ENST00000528010 LTBP4Q8N2S1 1624 aa24.84■■□□□ 1.57
TM9SF1-205ENST00000528010 CEP170BQ9Y4F5 1589 aaPredicted RBP24.83■■□□□ 1.57
TM9SF1-205ENST00000528010 IQSEC2Q5JU85 1478 aa24.83■■□□□ 1.56
TM9SF1-205ENST00000528010 PKD2Q13563 968 aa24.82■■□□□ 1.56
TM9SF1-205ENST00000528010 FAM135AQ9P2D6 1515 aa24.81■■□□□ 1.56
TM9SF1-205ENST00000528010 VPS8Q8N3P4 1428 aa24.8■■□□□ 1.56
TM9SF1-205ENST00000528010 NCKAP5LQ9HCH0 1330 aa24.79■■□□□ 1.56
TM9SF1-205ENST00000528010 KIF3BO15066 747 aa24.78■■□□□ 1.56
TM9SF1-205ENST00000528010 ARHGEF5Q12774 1597 aa24.78■■□□□ 1.56
TM9SF1-205ENST00000528010 TCOF1Q13428 1488 aaKnown RBP24.77■■□□□ 1.56
TM9SF1-205ENST00000528010 LRRC9Q6ZRR7 1453 aa24.77■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms