RNA–Protein interactions for RNA: ENST00000527945.2

LINC00958-203, long intergenic non-protein coding RNA 958, humanhuman

TSL 2 BASIC

Gene LINC00958, Length 1,121 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00958-203ENST00000527945 CDC42BPBQ9Y5S2 1711 aa14.74□□□□□ -0.05
LINC00958-203ENST00000527945 FANCAO15360 1455 aa14.74□□□□□ -0.05
LINC00958-203ENST00000527945 CFAP74Q9C0B2 1584 aa14.73□□□□□ -0.05
LINC00958-203ENST00000527945 FRMPD1Q5SYB0 1578 aa14.73□□□□□ -0.05
LINC00958-203ENST00000527945 DENND4BO75064 1496 aaPredicted RBP14.72□□□□□ -0.05
LINC00958-203ENST00000527945 PREX2Q70Z35 1606 aa14.7□□□□□ -0.06
LINC00958-203ENST00000527945 MAGI2Q86UL8 1455 aa14.7□□□□□ -0.06
LINC00958-203ENST00000527945 ZMYM4Q5VZL5 1548 aa14.69□□□□□ -0.06
LINC00958-203ENST00000527945 EHBP1L1Q8N3D4 1523 aa14.69□□□□□ -0.06
LINC00958-203ENST00000527945 EFCAB2Q5VUJ9 269 aa14.68□□□□□ -0.06
LINC00958-203ENST00000527945 RICTORQ6R327 1708 aa14.67□□□□□ -0.06
LINC00958-203ENST00000527945 MAP3K1Q13233 1512 aa14.66□□□□□ -0.06
LINC00958-203ENST00000527945 POGZQ7Z3K3 1410 aa14.66□□□□□ -0.06
LINC00958-203ENST00000527945 ARHGEF40Q8TER5 1519 aa14.64□□□□□ -0.07
LINC00958-203ENST00000527945 SCAPERQ9BY12 1400 aa14.64□□□□□ -0.07
LINC00958-203ENST00000527945 LRRC9Q6ZRR7 1453 aa14.63□□□□□ -0.07
LINC00958-203ENST00000527945 ADAMTSL3P82987 1691 aa14.63□□□□□ -0.07
LINC00958-203ENST00000527945 SUPT6HQ7KZ85 1726 aaKnown RBP14.63□□□□□ -0.07
LINC00958-203ENST00000527945 GPATCH8Q9UKJ3 1502 aaKnown RBP14.62□□□□□ -0.07
LINC00958-203ENST00000527945 SAMD9LQ8IVG5 1584 aa14.62□□□□□ -0.07
LINC00958-203ENST00000527945 KANK4Q5T7N3 995 aaPredicted RBP14.61□□□□□ -0.07
LINC00958-203ENST00000527945 ITSN2Q9NZM3 1697 aa14.61□□□□□ -0.07
LINC00958-203ENST00000527945 ARHGAP5Q13017 1502 aa14.61□□□□□ -0.07
LINC00958-203ENST00000527945 MTUS2Q5JR59 1369 aa14.6□□□□□ -0.07
LINC00958-203ENST00000527945 PTPRMP28827 1452 aa14.6□□□□□ -0.07
LINC00958-203ENST00000527945 NCOA2Q15596 1464 aa14.6□□□□□ -0.07
LINC00958-203ENST00000527945 ABCC1P33527 1531 aa14.6□□□□□ -0.07
LINC00958-203ENST00000527945 ARHGEF12Q9NZN5 1544 aa14.6□□□□□ -0.07
LINC00958-203ENST00000527945 YEATS2Q9ULM3 1422 aa14.59□□□□□ -0.07
LINC00958-203ENST00000527945 SIGLEC1Q9BZZ2 1709 aa14.58□□□□□ -0.07
LINC00958-203ENST00000527945 ZNF518AQ6AHZ1 1483 aa14.58□□□□□ -0.08
LINC00958-203ENST00000527945 ZFYVE16Q7Z3T8 1539 aa14.57□□□□□ -0.08
LINC00958-203ENST00000527945 KDM5CP41229 1560 aa14.57□□□□□ -0.08
LINC00958-203ENST00000527945 ATP10AO60312 1499 aa14.57□□□□□ -0.08
LINC00958-203ENST00000527945 BCORL1Q5H9F3 1711 aa14.56□□□□□ -0.08
LINC00958-203ENST00000527945 MLH3Q9UHC1 1453 aa14.56□□□□□ -0.08
LINC00958-203ENST00000527945 CCNB3Q8WWL7 1395 aa14.55□□□□□ -0.08
LINC00958-203ENST00000527945 HECW2Q9P2P5 1572 aa14.55□□□□□ -0.08
LINC00958-203ENST00000527945 PLEKHH2Q8IVE3 1493 aa14.54□□□□□ -0.08
LINC00958-203ENST00000527945 SYCP2Q9BX26 1530 aa14.54□□□□□ -0.08
LINC00958-203ENST00000527945 C9orf84Q5VXU9 1444 aa14.53□□□□□ -0.08
LINC00958-203ENST00000527945 AFAP1Q8N556 730 aa14.53□□□□□ -0.08
LINC00958-203ENST00000527945 REREQ9P2R6 1566 aa14.52□□□□□ -0.08
LINC00958-203ENST00000527945 KIAA1107Q9UPP5 1409 aa14.52□□□□□ -0.08
LINC00958-203ENST00000527945 TRAPPC8Q9Y2L5 1435 aa14.52□□□□□ -0.08
LINC00958-203ENST00000527945 CFDP1Q9UEE9 299 aaPredicted RBP14.52□□□□□ -0.09
LINC00958-203ENST00000527945 ARID4BQ4LE39 1312 aaPredicted RBP14.51□□□□□ -0.09
LINC00958-203ENST00000527945 ABCA6Q8N139 1617 aa14.49□□□□□ -0.09
LINC00958-203ENST00000527945 ZNF644Q9H582 1327 aaPredicted RBP14.49□□□□□ -0.09
LINC00958-203ENST00000527945 KIDINS220Q9ULH0 1771 aa14.49□□□□□ -0.09
LINC00958-203ENST00000527945 MADDQ8WXG6 1647 aa14.48□□□□□ -0.09
LINC00958-203ENST00000527945 AGLP35573 1532 aa14.48□□□□□ -0.09
LINC00958-203ENST00000527945 CAMSAP2Q08AD1 1489 aa14.48□□□□□ -0.09
LINC00958-203ENST00000527945 MBD5Q9P267 1494 aa14.48□□□□□ -0.09
LINC00958-203ENST00000527945 APLP2Q06481 763 aa14.47□□□□□ -0.09
LINC00958-203ENST00000527945 RSPH4AQ5TD94 716 aa14.47□□□□□ -0.09
LINC00958-203ENST00000527945 INO80Q9ULG1 1556 aaPredicted RBP14.47□□□□□ -0.09
LINC00958-203ENST00000527945 LMTK3Q96Q04 1460 aa14.46□□□□□ -0.09
LINC00958-203ENST00000527945 MYOM3Q5VTT5 1437 aa14.46□□□□□ -0.09
LINC00958-203ENST00000527945 DIP2CQ9Y2E4 1556 aa14.46□□□□□ -0.09
LINC00958-203ENST00000527945 ZNF777Q9ULD5 760 aaPredicted RBP14.44□□□□□ -0.1
LINC00958-203ENST00000527945 PTPN23Q9H3S7 1636 aa14.44□□□□□ -0.1
LINC00958-203ENST00000527945 ARHGEF5Q12774 1597 aa14.42□□□□□ -0.1
LINC00958-203ENST00000527945 CROCC2H7BZ55 1655 aa14.42□□□□□ -0.1
LINC00958-203ENST00000527945 HNRNPMP52272 730 aaKnown RBP eCLIP14.41□□□□□ -0.1
LINC00958-203ENST00000527945 ADGBQ8N7X0 1667 aa14.41□□□□□ -0.1
LINC00958-203ENST00000527945 MIA2Q96PC5 1412 aa14.41□□□□□ -0.1
LINC00958-203ENST00000527945 SPAG9O60271 1321 aaKnown RBP14.41□□□□□ -0.1
LINC00958-203ENST00000527945 TCOF1Q13428 1488 aaKnown RBP14.4□□□□□ -0.1
LINC00958-203ENST00000527945 MYT1LQ9UL68 1186 aa14.4□□□□□ -0.1
LINC00958-203ENST00000527945 ATP7AQ04656 1500 aa14.4□□□□□ -0.1
LINC00958-203ENST00000527945 RTEL1-TNFRSF6BF6WH68 1400 aa14.4□□□□□ -0.1
LINC00958-203ENST00000527945 FGD6Q6ZV73 1430 aa14.4□□□□□ -0.1
LINC00958-203ENST00000527945 PPARGC1BQ86YN6 1023 aaKnown RBP14.38□□□□□ -0.11
LINC00958-203ENST00000527945 CCDC141Q6ZP82 1450 aa14.38□□□□□ -0.11
LINC00958-203ENST00000527945 RIMS1Q86UR5 1692 aaKnown RBP14.37□□□□□ -0.11
LINC00958-203ENST00000527945 PLXNC1O60486 1568 aa14.37□□□□□ -0.11
LINC00958-203ENST00000527945 DNMT1P26358 1616 aaKnown RBP14.37□□□□□ -0.11
LINC00958-203ENST00000527945 MAST1Q9Y2H9 1570 aa14.36□□□□□ -0.11
LINC00958-203ENST00000527945 CNTLNQ9NXG0 1405 aa14.36□□□□□ -0.11
LINC00958-203ENST00000527945 MLECQ14165 292 aa14.36□□□□□ -0.11
LINC00958-203ENST00000527945 PPP6R1Q9UPN7 881 aa14.36□□□□□ -0.11
LINC00958-203ENST00000527945 TSPY4P0CV99 314 aa14.33□□□□□ -0.12
LINC00958-203ENST00000527945 TSPY10P0CW01 314 aa14.33□□□□□ -0.12
LINC00958-203ENST00000527945 ABCC5O15440 1437 aa14.32□□□□□ -0.12
LINC00958-203ENST00000527945 FER1L4A9Z1Z3 1794 aa14.32□□□□□ -0.12
LINC00958-203ENST00000527945 ILDR1Q86SU0 546 aaPredicted RBP14.32□□□□□ -0.12
LINC00958-203ENST00000527945 NPATQ14207 1427 aa14.31□□□□□ -0.12
LINC00958-203ENST00000527945 A2MP01023 1474 aa14.31□□□□□ -0.12
LINC00958-203ENST00000527945 CEBPAP49715 358 aaPredicted RBP14.3□□□□□ -0.12
LINC00958-203ENST00000527945 DAPK1P53355 1430 aa14.3□□□□□ -0.12
LINC00958-203ENST00000527945 DHX29Q7Z478 1369 aaKnown RBP14.29□□□□□ -0.12
LINC00958-203ENST00000527945 SHANK2Q9UPX8 1470 aa14.29□□□□□ -0.12
LINC00958-203ENST00000527945 HSPA2P54652 639 aa14.28□□□□□ -0.12
LINC00958-203ENST00000527945 PTPRKQ15262 1439 aa14.28□□□□□ -0.12
LINC00958-203ENST00000527945 ESF1Q9H501 851 aaKnown RBP14.28□□□□□ -0.12
LINC00958-203ENST00000527945 UHRF1BP1Q6BDS2 1440 aa14.27□□□□□ -0.12
LINC00958-203ENST00000527945 ZMYM3Q14202 1370 aa14.27□□□□□ -0.12
LINC00958-203ENST00000527945 RRBP1Q9P2E9 1410 aaKnown RBP14.25□□□□□ -0.13
LINC00958-203ENST00000527945 MROH1Q8NDA8 1641 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms