RNA–Protein interactions for RNA: ENST00000527902.5

NXF1-206, Transcript of nuclear RNA export factor 1, humanhuman

TSL 3

Gene NXF1, Length 619 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-206ENST00000527902 AKNAQ7Z591 1439 aa28.03■■■□□ 2.08
NXF1-206ENST00000527902 PHLDB1Q86UU1 1377 aa28.03■■■□□ 2.08
NXF1-206ENST00000527902 GPATCH8Q9UKJ3 1502 aaKnown RBP28.02■■■□□ 2.08
NXF1-206ENST00000527902 NCOA2Q15596 1464 aa28.01■■■□□ 2.07
NXF1-206ENST00000527902 FRMPD1Q5SYB0 1578 aa27.99■■■□□ 2.07
NXF1-206ENST00000527902 EFCAB2Q5VUJ9 269 aa27.97■■■□□ 2.07
NXF1-206ENST00000527902 RICTORQ6R327 1708 aa27.97■■■□□ 2.07
NXF1-206ENST00000527902 CCNB3Q8WWL7 1395 aa27.97■■■□□ 2.07
NXF1-206ENST00000527902 ITSN2Q9NZM3 1697 aa27.96■■■□□ 2.07
NXF1-206ENST00000527902 ADGRL1O94910 1474 aa27.95■■■□□ 2.07
NXF1-206ENST00000527902 APLP2Q06481 763 aa27.95■■■□□ 2.06
NXF1-206ENST00000527902 RAPGEF3O95398 923 aa27.93■■■□□ 2.06
NXF1-206ENST00000527902 SAMD9LQ8IVG5 1584 aa27.93■■■□□ 2.06
NXF1-206ENST00000527902 DENND4BO75064 1496 aaPredicted RBP27.91■■■□□ 2.06
NXF1-206ENST00000527902 ABCC1P33527 1531 aa27.91■■■□□ 2.06
NXF1-206ENST00000527902 SCAPERQ9BY12 1400 aa27.91■■■□□ 2.06
NXF1-206ENST00000527902 ARHGEF12Q9NZN5 1544 aa27.87■■■□□ 2.05
NXF1-206ENST00000527902 POGZQ7Z3K3 1410 aa27.86■■■□□ 2.05
NXF1-206ENST00000527902 CFDP1Q9UEE9 299 aaPredicted RBP27.86■■■□□ 2.05
NXF1-206ENST00000527902 ZNF777Q9ULD5 760 aaPredicted RBP27.83■■■□□ 2.05
NXF1-206ENST00000527902 ZMYM4Q5VZL5 1548 aa27.82■■■□□ 2.04
NXF1-206ENST00000527902 SYCP2Q9BX26 1530 aa27.82■■■□□ 2.04
NXF1-206ENST00000527902 KDM5CP41229 1560 aa27.79■■■□□ 2.04
NXF1-206ENST00000527902 TRAPPC8Q9Y2L5 1435 aa27.79■■■□□ 2.04
NXF1-206ENST00000527902 ZNF644Q9H582 1327 aaPredicted RBP27.79■■■□□ 2.04
NXF1-206ENST00000527902 MYOM3Q5VTT5 1437 aa27.78■■■□□ 2.04
NXF1-206ENST00000527902 ZNF518AQ6AHZ1 1483 aa27.77■■■□□ 2.04
NXF1-206ENST00000527902 AFAP1Q8N556 730 aa27.75■■■□□ 2.03
NXF1-206ENST00000527902 CAMSAP2Q08AD1 1489 aa27.75■■■□□ 2.03
NXF1-206ENST00000527902 PLEKHH2Q8IVE3 1493 aa27.75■■■□□ 2.03
NXF1-206ENST00000527902 KIAA1107Q9UPP5 1409 aa27.75■■■□□ 2.03
NXF1-206ENST00000527902 ARHGEF40Q8TER5 1519 aa27.74■■■□□ 2.03
NXF1-206ENST00000527902 HNRNPMP52272 730 aaKnown RBP eCLIP27.72■■■□□ 2.03
NXF1-206ENST00000527902 YEATS2Q9ULM3 1422 aa27.71■■■□□ 2.03
NXF1-206ENST00000527902 ZFYVE16Q7Z3T8 1539 aa27.71■■■□□ 2.03
NXF1-206ENST00000527902 MBD5Q9P267 1494 aa27.7■■■□□ 2.03
NXF1-206ENST00000527902 HECW2Q9P2P5 1572 aa27.7■■■□□ 2.03
NXF1-206ENST00000527902 MIA2Q96PC5 1412 aa27.69■■■□□ 2.02
NXF1-206ENST00000527902 PPARGC1BQ86YN6 1023 aaKnown RBP27.69■■■□□ 2.02
NXF1-206ENST00000527902 MAGI2Q86UL8 1455 aa27.69■■■□□ 2.02
NXF1-206ENST00000527902 KIDINS220Q9ULH0 1771 aa27.66■■■□□ 2.02
NXF1-206ENST00000527902 MLH3Q9UHC1 1453 aa27.65■■■□□ 2.02
NXF1-206ENST00000527902 SIGLEC1Q9BZZ2 1709 aa27.65■■■□□ 2.02
NXF1-206ENST00000527902 PTPN23Q9H3S7 1636 aa27.65■■■□□ 2.02
NXF1-206ENST00000527902 FGD6Q6ZV73 1430 aa27.65■■■□□ 2.02
NXF1-206ENST00000527902 ABCA6Q8N139 1617 aa27.64■■■□□ 2.02
NXF1-206ENST00000527902 ARHGEF5Q12774 1597 aa27.62■■■□□ 2.01
NXF1-206ENST00000527902 INO80Q9ULG1 1556 aaPredicted RBP27.62■■■□□ 2.01
NXF1-206ENST00000527902 DIP2CQ9Y2E4 1556 aa27.62■■■□□ 2.01
NXF1-206ENST00000527902 CCDC141Q6ZP82 1450 aa27.59■■■□□ 2.01
NXF1-206ENST00000527902 TCOF1Q13428 1488 aaKnown RBP27.58■■■□□ 2.01
NXF1-206ENST00000527902 ATP7AQ04656 1500 aa27.58■■■□□ 2.01
NXF1-206ENST00000527902 SPAG9O60271 1321 aaKnown RBP27.56■■■□□ 2
NXF1-206ENST00000527902 ATP10AO60312 1499 aa27.56■■■□□ 2
NXF1-206ENST00000527902 MYT1LQ9UL68 1186 aa27.53■■■□□ 2
NXF1-206ENST00000527902 C9orf84Q5VXU9 1444 aa27.52■■■□□ 2
NXF1-206ENST00000527902 CROCC2H7BZ55 1655 aa27.52■■■□□ 2
NXF1-206ENST00000527902 REREQ9P2R6 1566 aa27.51■■□□□ 1.99
NXF1-206ENST00000527902 DNMT1P26358 1616 aaKnown RBP27.49■■□□□ 1.99
NXF1-206ENST00000527902 BCORL1Q5H9F3 1711 aa27.48■■□□□ 1.99
NXF1-206ENST00000527902 KDM4FA0A1W2PPD8 638 aa27.48■■□□□ 1.99
NXF1-206ENST00000527902 RSPH4AQ5TD94 716 aa27.48■■□□□ 1.99
NXF1-206ENST00000527902 ADGBQ8N7X0 1667 aa27.48■■□□□ 1.99
NXF1-206ENST00000527902 RTEL1-TNFRSF6BF6WH68 1400 aa27.48■■□□□ 1.99
NXF1-206ENST00000527902 MAST1Q9Y2H9 1570 aa27.48■■□□□ 1.99
NXF1-206ENST00000527902 ABCC5O15440 1437 aa27.46■■□□□ 1.99
NXF1-206ENST00000527902 DAPK1P53355 1430 aa27.44■■□□□ 1.98
NXF1-206ENST00000527902 PLXNC1O60486 1568 aa27.43■■□□□ 1.98
NXF1-206ENST00000527902 ARID4BQ4LE39 1312 aaPredicted RBP27.43■■□□□ 1.98
NXF1-206ENST00000527902 ADAMTSL3P82987 1691 aa27.43■■□□□ 1.98
NXF1-206ENST00000527902 SHANK2Q9UPX8 1470 aa27.41■■□□□ 1.98
NXF1-206ENST00000527902 FAM50AQ14320 339 aaKnown RBP27.41■■□□□ 1.98
NXF1-206ENST00000527902 AGLP35573 1532 aa27.4■■□□□ 1.98
NXF1-206ENST00000527902 A2MP01023 1474 aa27.39■■□□□ 1.98
NXF1-206ENST00000527902 TSPY4P0CV99 314 aa27.39■■□□□ 1.98
NXF1-206ENST00000527902 TSPY10P0CW01 314 aa27.39■■□□□ 1.98
NXF1-206ENST00000527902 MADDQ8WXG6 1647 aa27.37■■□□□ 1.97
NXF1-206ENST00000527902 RRBP1Q9P2E9 1410 aaKnown RBP27.36■■□□□ 1.97
NXF1-206ENST00000527902 MLECQ14165 292 aa27.32■■□□□ 1.96
NXF1-206ENST00000527902 FER1L4A9Z1Z3 1794 aa27.32■■□□□ 1.96
NXF1-206ENST00000527902 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.31■■□□□ 1.96
NXF1-206ENST00000527902 PTPRKQ15262 1439 aa27.31■■□□□ 1.96
NXF1-206ENST00000527902 DHX29Q7Z478 1369 aaKnown RBP27.3■■□□□ 1.96
NXF1-206ENST00000527902 RIMS1Q86UR5 1692 aaKnown RBP27.3■■□□□ 1.96
NXF1-206ENST00000527902 CHIC2Q9UKJ5 165 aa27.27■■□□□ 1.96
NXF1-206ENST00000527902 ADGRL2O95490 1459 aa27.26■■□□□ 1.95
NXF1-206ENST00000527902 DUOX2Q9NRD8 1548 aa27.24■■□□□ 1.95
NXF1-206ENST00000527902 KIF15Q9NS87 1388 aa27.23■■□□□ 1.95
NXF1-206ENST00000527902 NCOA1Q15788 1441 aa27.23■■□□□ 1.95
NXF1-206ENST00000527902 PTPRMP28827 1452 aa27.21■■□□□ 1.95
NXF1-206ENST00000527902 EIF2AK4Q9P2K8 1649 aaKnown RBP27.21■■□□□ 1.95
NXF1-206ENST00000527902 RRP7BPQ9NSQ0 103 aa27.21■■□□□ 1.95
NXF1-206ENST00000527902 ANKRD30AQ9BXX3 1397 aa27.21■■□□□ 1.95
NXF1-206ENST00000527902 ITGAEP38570 1179 aa27.18■■□□□ 1.94
NXF1-206ENST00000527902 RNF17Q9BXT8 1623 aaKnown RBP27.17■■□□□ 1.94
NXF1-206ENST00000527902 KIF3BO15066 747 aa27.16■■□□□ 1.94
NXF1-206ENST00000527902 AEBP2Q6ZN18 517 aaPredicted RBP27.16■■□□□ 1.94
NXF1-206ENST00000527902 ERBINQ96RT1 1412 aa27.15■■□□□ 1.94
NXF1-206ENST00000527902 CLTCQ00610 1675 aaKnown RBP27.14■■□□□ 1.94
NXF1-206ENST00000527902 GGT6Q6P531 493 aa27.14■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms